BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0193.0023.p         (119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773253.1| hypothetical protein bll6613 [Bradyrhizobium ja...   195   2e-48
ref|YP_001207557.1| hypothetical protein BRADO5671 [Bradyrhizobi...   164   4e-39
ref|YP_001242015.1| hypothetical protein BBta_6185 [Bradyrhizobi...   155   1e-36
ref|YP_628948.1| DGPF domain-containing protein [Myxococcus xant...   144   4e-33
ref|YP_004664076.1| DGPF domain-containing protein [Myxococcus f...   142   1e-32

>ref|NP_773253.1| hypothetical protein bll6613 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51878.1| bll6613 [Bradyrhizobium japonicum USDA 110]
          Length = 116

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/115 (85%), Positives = 106/115 (92%)

Query: 1   MQYLLLIYRSDAEYGRMNADDRKALSAEYAVYTQSIIQSGHFKAGDGLQPVSTATTVRVR 60
           MQYLLLIYRS+AE  +M   DR+A+SAEY  YTQSI+QSGHFKAGDGLQP +TATTVRVR
Sbjct: 1   MQYLLLIYRSEAELSKMTPADRQAMSAEYGTYTQSIVQSGHFKAGDGLQPTTTATTVRVR 60

Query: 61  DGKTLTTDGPFAETREQLGGYYLVDAKDLDTALGLAARIPGAKTGSIEVRPVMIY 115
           DGKTLTTDGPFAETREQLGGYYLV+AKDLDTA+GLAARIPGAK GSIEVRPVMIY
Sbjct: 61  DGKTLTTDGPFAETREQLGGYYLVEAKDLDTAIGLAARIPGAKEGSIEVRPVMIY 115


>ref|YP_001207557.1| hypothetical protein BRADO5671 [Bradyrhizobium sp. ORS 278]
 emb|CAL79340.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 117

 Score =  164 bits (415), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 76/118 (64%), Positives = 97/118 (82%), Gaps = 1/118 (0%)

Query: 1   MQYLLLIYRSDAEYGRMNADDRKALSAEYAVYTQSIIQSGHFKAGDGLQPVSTATTVRVR 60
           MQYLL+IY+++ +Y +M  +  + + AEY  +TQSII SG+FK GD LQP ST+TTVRVR
Sbjct: 1   MQYLLMIYQNEVDYAKMEKEAAEKMMAEYQAFTQSIIASGNFKGGDRLQPTSTSTTVRVR 60

Query: 61  DGKTLTTDGPFAETREQLGGYYLVDAKDLDTALGLAARIPGAKTGSIEVRPVMIYDNP 118
           DGK L TDGPFAETREQLGGYY+++A+++D A+G+AARIPGA+ GSIEVRPV  Y NP
Sbjct: 61  DGKILATDGPFAETREQLGGYYMIEAQNIDEAIGIAARIPGARLGSIEVRPVWQY-NP 117


>ref|YP_001242015.1| hypothetical protein BBta_6185 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38109.1| hypothetical protein BBta_6185 [Bradyrhizobium sp. BTAi1]
          Length = 117

 Score =  155 bits (393), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/117 (64%), Positives = 95/117 (81%)

Query: 1   MQYLLLIYRSDAEYGRMNADDRKALSAEYAVYTQSIIQSGHFKAGDGLQPVSTATTVRVR 60
           MQYLL+IY ++ EY +M  +    + AEY  +TQSII SG++K GD LQP +T+TTVRVR
Sbjct: 1   MQYLLMIYLNEVEYAKMEKEAEGKMLAEYQTFTQSIIASGNYKGGDRLQPTTTSTTVRVR 60

Query: 61  DGKTLTTDGPFAETREQLGGYYLVDAKDLDTALGLAARIPGAKTGSIEVRPVMIYDN 117
           DGK LTTDGPFAETREQLGGYY+++A +LD A+G+AARIPGA+ GSIEVRPV  Y++
Sbjct: 61  DGKILTTDGPFAETREQLGGYYMIEANNLDEAIGIAARIPGARLGSIEVRPVWQYNH 117


>ref|YP_628948.1| DGPF domain-containing protein [Myxococcus xanthus DK 1622]
 gb|ABF89037.1| DGPF domain protein [Myxococcus xanthus DK 1622]
          Length = 125

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MQYLLLIYRSDAEYGRMNADDRKALSAEYAVYTQSIIQSGHFKAGDGLQPVSTATTVRVR 60
           M+YLL+IY ++     M+  D + +  EY  +  +I QSGHF +G+ L+P + ATTVR+R
Sbjct: 6   MKYLLMIYENEKAAEAMSEADVQRVMGEYGTFEVAIQQSGHFISGEELEPTTAATTVRIR 65

Query: 61  DGKTLTTDGPFAETREQLGGYYLVDAKDLDTALGLAARIPGAKTGSIEVRPVMIYDNPR 119
           DGK LTTDGPFAETREQLGG++LV+A+DLD A+G+A+RIP A++GSIEVRPV  +  P+
Sbjct: 66  DGKRLTTDGPFAETREQLGGFFLVEARDLDEAIGIASRIPSARSGSIEVRPVREFARPQ 124


>ref|YP_004664076.1| DGPF domain-containing protein [Myxococcus fulvus HW-1]
 gb|AEI62998.1| DGPF domain-containing protein [Myxococcus fulvus HW-1]
          Length = 120

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 92/119 (77%)

Query: 1   MQYLLLIYRSDAEYGRMNADDRKALSAEYAVYTQSIIQSGHFKAGDGLQPVSTATTVRVR 60
           M+YLL+IY ++     ++  + + +  EY  +T++I  SGHF +G+ L+P + ATTVR+R
Sbjct: 1   MKYLLMIYENEKAAEALSEAEVQRMLGEYGTFTEAIQNSGHFVSGEELEPTAAATTVRIR 60

Query: 61  DGKTLTTDGPFAETREQLGGYYLVDAKDLDTALGLAARIPGAKTGSIEVRPVMIYDNPR 119
           DGK LTTDGPFAETREQLGG++LV+A++LD A+G+A+RIP A+TGSIEVRPV  +  P+
Sbjct: 61  DGKRLTTDGPFAETREQLGGFFLVEARNLDEAIGIASRIPAARTGSIEVRPVREFPLPQ 119