BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0011.p (735 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_578790.1| acriflavin resistance protein [Nitrobacter hamb... 458 e-126 ref|YP_001419046.1| acriflavin resistance protein [Xanthobacter ... 382 e-103 ref|YP_001858001.1| acriflavin resistance protein [Burkholderia ... 359 1e-96 ref|YP_001525347.1| cation/multidrug efflux pump [Azorhizobium c... 349 1e-93 ref|ZP_02375302.1| AcrB/AcrD/AcrF family protein [Burkholderia t... 342 2e-91 >ref|YP_578790.1| acriflavin resistance protein [Nitrobacter hamburgensis X14] gb|ABE64330.1| acriflavin resistance protein [Nitrobacter hamburgensis X14] Length = 1096 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 250/293 (85%), Positives = 270/293 (92%) Query: 1 VIARLRREMSVVPGASLFLQAVQDIRVGGRASNAQYQYTLQGSTLEELNEWTPKIAAALQ 60 VI RLRRE++VVPGA+LFLQAVQDIR GGRASNAQYQYTLQ TLEEL+EWTPKIAAALQ Sbjct: 627 VIGRLRRELAVVPGATLFLQAVQDIRAGGRASNAQYQYTLQSPTLEELDEWTPKIAAALQ 686 Query: 61 RDPDLADVNSDQQNKGLESDLVTDRDAAARLGITVSQIDNTLYDAFGQRQVSTIYVARNQ 120 R+P L DVNSDQQNKGLES+LV DRDAAARLGITVSQIDNTLYDAFGQRQVSTIYVARNQ Sbjct: 687 REPALTDVNSDQQNKGLESNLVIDRDAAARLGITVSQIDNTLYDAFGQRQVSTIYVARNQ 746 Query: 121 YHVIMEVAPRYWQNPETLKDVYISTSGGSVGGSQSTNAVAGTVVAPGTSSAASAANAQAA 180 YHV+MEVAPRYWQNPETLKDVYISTSGGSVGGSQ+TNAV GTVVA G S++AS+ANA AA Sbjct: 747 YHVVMEVAPRYWQNPETLKDVYISTSGGSVGGSQATNAVVGTVVASGQSASASSANANAA 806 Query: 181 RNQATNSIGSTGKGVASTGSAVSTSSETMIPLSEVAAFKQGATPLAVNHQGLLVANTISF 240 RN ATNSIG+TGKG +STGSAVST ETMIPLS VA F++GA PLAVNHQGLLVANTISF Sbjct: 807 RNLATNSIGATGKGASSTGSAVSTGQETMIPLSAVAHFERGAAPLAVNHQGLLVANTISF 866 Query: 241 NLPPNVSLSTAVGSIEATMNRIGVPATIRGTFQGTAKAFQDSLSNQPFLILAA 293 NLPPNVSLSTAV +IE TMNRIGVPAT+ G+FQGTAK FQ+SLS QP+LILAA Sbjct: 867 NLPPNVSLSTAVATIETTMNRIGVPATVHGSFQGTAKVFQESLSTQPYLILAA 919 Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 174/269 (64%), Positives = 200/269 (74%), Gaps = 40/269 (14%) Query: 317 SIGATGKGVASTGTAVSTSAETMIPLSSVARFEHGETPLSVNHQDLLVSSTISFNLPPGV 376 SIGATGKG +STG+AVST ETMIPLS+VA FE G PL+VNHQ LLV++TISFNLPP V Sbjct: 813 SIGATGKGASSTGSAVSTGQETMIPLSAVAHFERGAAPLAVNHQGLLVANTISFNLPPNV 872 Query: 377 SLSTATTTIENAMHALGMPAGISGGFAGSAKIFQQALANELFLILAALATIYISLGMLYE 436 SLSTA TIE M+ +G+PA + G F G+AK+FQ++L+ + +LILAAL TIYI LG+LYE Sbjct: 873 SLSTAVATIETTMNRIGVPATVHGSFQGTAKVFQESLSTQPYLILAALITIYIVLGVLYE 932 Query: 437 SYIHPLTILSTLPSAGVGAVAALMLSHTDFDIIGMIGVILLVGIVKXILSTLPSAGVGAL 496 SY+HPLTILS TLPSAGVGAL Sbjct: 933 SYVHPLTILS----------------------------------------TLPSAGVGAL 952 Query: 497 LALMAFKTEFSIMALIGVILLIGIVKKNAIMMIDFALEAERRRGLEPLEAIREACLLRFR 556 LALMAF TEFSIM+LIGVILLIGIVKKNAIMMIDFAL+AER RGL +AI EACLLRFR Sbjct: 953 LALMAFNTEFSIMSLIGVILLIGIVKKNAIMMIDFALDAERARGLSSRDAIYEACLLRFR 1012 Query: 557 PIMMTTMAALLGAVPLAIGMGDGGELRQP 585 PIMMTTMAA+LGA+PLAIGMG+G ELR+P Sbjct: 1013 PIMMTTMAAMLGALPLAIGMGEGSELRRP 1041 >ref|YP_001419046.1| acriflavin resistance protein [Xanthobacter autotrophicus Py2] gb|ABS69389.1| acriflavin resistance protein [Xanthobacter autotrophicus Py2] Length = 1091 Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust. Identities = 198/293 (67%), Positives = 240/293 (81%), Gaps = 1/293 (0%) Query: 1 VIARLRREMSVVPGASLFLQAVQDIRVGGRASNAQYQYTLQGSTLEELNEWTPKIAAALQ 60 VI RLRR ++VVPGA+LFLQA QDI+VGGR +NAQ+QYTL+G + +EL EW PK+ AALQ Sbjct: 627 VITRLRRALAVVPGANLFLQAAQDIQVGGRPANAQFQYTLEGDSFQELAEWVPKLLAALQ 686 Query: 61 RDPDLADVNSDQQNKGLESDLVTDRDAAARLGITVSQIDNTLYDAFGQRQVSTIYVARNQ 120 RDP + NSDQQ++G+++++V DRD AARLGI+V QIDNTLYDAFGQRQVSTIYVARNQ Sbjct: 687 RDPRVTQANSDQQSRGIQTEIVIDRDTAARLGISVGQIDNTLYDAFGQRQVSTIYVARNQ 746 Query: 121 YHVIMEVAPRYWQNPETLKDVYISTSGGSVGGSQSTNAVAGTVVAPGTSSAASAANAQAA 180 YHV+MEVAPR+ Q+PE L DV+ISTSGG+VGGSQ T AVAGT A SSA ++ A AA Sbjct: 747 YHVVMEVAPRFSQHPEVLDDVFISTSGGAVGGSQGTGAVAGTFSA-AGSSATASTAASAA 805 Query: 181 RNQATNSIGSTGKGVASTGSAVSTSSETMIPLSEVAAFKQGATPLAVNHQGLLVANTISF 240 RN TN+IG+TG+ ASTGSAVSTS+ MIPLS VA F G+TPLAVNHQGL VA T+SF Sbjct: 806 RNALTNAIGATGRASASTGSAVSTSAAPMIPLSSVARFGTGSTPLAVNHQGLFVAATLSF 865 Query: 241 NLPPNVSLSTAVGSIEATMNRIGVPATIRGTFQGTAKAFQDSLSNQPFLILAA 293 NL P +LS AV +++A +IG+PA+I G+FQGTA+AFQ SLS+QP LILAA Sbjct: 866 NLAPGAALSDAVVAVDAAKAQIGLPASIHGSFQGTARAFQQSLSSQPLLILAA 918 Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 161/275 (58%), Positives = 190/275 (69%), Gaps = 40/275 (14%) Query: 311 RNQATNSIGATGKGVASTGTAVSTSAETMIPLSSVARFEHGETPLSVNHQDLLVSSTISF 370 RN TN+IGATG+ ASTG+AVSTSA MIPLSSVARF G TPL+VNHQ L V++T+SF Sbjct: 806 RNALTNAIGATGRASASTGSAVSTSAAPMIPLSSVARFGTGSTPLAVNHQGLFVAATLSF 865 Query: 371 NLPPGVSLSTATTTIENAMHALGMPAGISGGFAGSAKIFQQALANELFLILAALATIYIS 430 NL PG +LS A ++ A +G+PA I G F G+A+ FQQ+L+++ LILAAL +Y+ Sbjct: 866 NLAPGAALSDAVVAVDAAKAQIGLPASIHGSFQGTARAFQQSLSSQPLLILAALVAVYLV 925 Query: 431 LGMLYESYIHPLTILSTLPSAGVGAVAALMLSHTDFDIIGMIGVILLVGIVKXILSTLPS 490 LGMLYES+ HPLTIL STLPS Sbjct: 926 LGMLYESFAHPLTIL----------------------------------------STLPS 945 Query: 491 AGVGALLALMAFKTEFSIMALIGVILLIGIVKKNAIMMIDFALEAERRRGLEPLEAIREA 550 AGVGALLALMAF EF++MALIGVILLIGIVKKNAIMMID AL+AER G+ P EAI A Sbjct: 946 AGVGALLALMAFGGEFNVMALIGVILLIGIVKKNAIMMIDVALDAERNGGMAPREAIFHA 1005 Query: 551 CLLRFRPIMMTTMAALLGAVPLAIGMGDGGELRQP 585 CLLRFRPIMMTTMAAL GA+PL +G G+G ELR+P Sbjct: 1006 CLLRFRPIMMTTMAALFGAIPLMVGFGEGSELRRP 1040 >ref|YP_001858001.1| acriflavin resistance protein [Burkholderia phymatum STM815] gb|ACC70955.1| acriflavin resistance protein [Burkholderia phymatum STM815] Length = 1103 Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 191/305 (62%), Positives = 223/305 (73%), Gaps = 12/305 (3%) Query: 1 VIARLRREMSVVPGASLFLQAVQDIRVGGRASNAQYQYTLQGSTLEELNEWTPKIAAALQ 60 VI +LR +S V GA FLQAVQDIRVGGR SNAQYQ+TL T +L +WTP++ ALQ Sbjct: 628 VIQQLRAPLSDVAGARTFLQAVQDIRVGGRQSNAQYQFTLLSDTTSDLYQWTPRLTEALQ 687 Query: 61 RDPDLADVNSDQQNKGLESDLVTDRDAAARLGITVSQIDNTLYDAFGQRQVSTIYVARNQ 120 + P+LADVNSDQQ GLE+ + DR AARL I +QIDNTLYDAFGQRQVSTIY NQ Sbjct: 688 KRPELADVNSDQQQGGLEAMVTIDRATAARLNIKPAQIDNTLYDAFGQRQVSTIYNPLNQ 747 Query: 121 YHVIMEVAPRYWQNPETLKDVYISTSGGSVGGSQSTNAVAGTVVAPGTSS---------- 170 YHV+MEVAP+YWQ+P+ L V+ISTSGGS G+QSTNA AGTV + TS Sbjct: 748 YHVVMEVAPKYWQSPDILNQVWISTSGGSASGAQSTNATAGTVTSAATSKATTGAAAGTT 807 Query: 171 --AASAANAQAARNQATNSIGSTGKGVASTGSAVSTSSETMIPLSEVAAFKQGATPLAVN 228 +A+A + AARN A NSI S+GK ASTG+AVSTS ETMIPLS +A+F G TPLAVN Sbjct: 808 ASSAAAIASDAARNLANNSIASSGKSSASTGAAVSTSKETMIPLSAIASFGPGTTPLAVN 867 Query: 229 HQGLLVANTISFNLPPNVSLSTAVGSIEATMNRIGVPATIRGTFQGTAKAFQDSLSNQPF 288 HQ VA+TISFNLPP SLS A I TM IG+P TI G+FQGTA+AFQ S+S+QP Sbjct: 868 HQSQFVASTISFNLPPGKSLSDATQIIYQTMAEIGMPGTIHGSFQGTAQAFQQSMSDQPI 927 Query: 289 LILAA 293 LILAA Sbjct: 928 LILAA 932 Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 163/275 (59%), Positives = 188/275 (68%), Gaps = 41/275 (14%) Query: 311 RNQATNSIGATGKGVASTGTAVSTSAETMIPLSSVARFEHGETPLSVNHQDLLVSSTISF 370 RN A NSI ++GK ASTG AVSTS ETMIPLS++A F G TPL+VNHQ V+STISF Sbjct: 820 RNLANNSIASSGKSSASTGAAVSTSKETMIPLSAIASFGPGTTPLAVNHQSQFVASTISF 879 Query: 371 NLPPGVSLSTATTTIENAMHALGMPAGISGGFAGSAKIFQQALANELFLILAALATIYIS 430 NLPPG SLS AT I M +GMP I G F G+A+ FQQ+++++ LILAALA +YI Sbjct: 880 NLPPGKSLSDATQIIYQTMAEIGMPGTIHGSFQGTAQAFQQSMSDQPILILAALAAVYIV 939 Query: 431 LGMLYESYIHPLTILSTLPSAGVGAVAALMLSHTDFDIIGMIGVILLVGIVKXILSTLPS 490 LGMLYESYIHPLTILS TLPS Sbjct: 940 LGMLYESYIHPLTILS----------------------------------------TLPS 959 Query: 491 AGVGALLALMAFKTEFSIMALIGVILLIGIVKKNAIMMIDFALEAERRRGLEPLEAIREA 550 AGVGALLAL+ F TEFSI+ALI VILLIGIVKKNAIMM+DFA++A R+GL +AI +A Sbjct: 960 AGVGALLALLLFNTEFSIIALIAVILLIGIVKKNAIMMVDFAIDAS-RKGLSSRDAIEQA 1018 Query: 551 CLLRFRPIMMTTMAALLGAVPLAIGMGDGGELRQP 585 CLLRFRPIMMTT AALLGA+PLA G G+G ELR P Sbjct: 1019 CLLRFRPIMMTTCAALLGALPLAFGRGEGAELRAP 1053 >ref|YP_001525347.1| cation/multidrug efflux pump [Azorhizobium caulinodans ORS 571] dbj|BAF88429.1| cation/multidrug efflux pump [Azorhizobium caulinodans ORS 571] Length = 1092 Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 181/299 (60%), Positives = 213/299 (71%), Gaps = 7/299 (2%) Query: 1 VIARLRREMSVVPGASLFLQAVQDIRVGGRASNAQYQYTLQGSTLEELNEWTPKIAAALQ 60 VIARLR +S VPGA++FLQA+QD+R GGR SNAQYQ+TLQ L L EWTPKI AL+ Sbjct: 628 VIARLRGRLSSVPGATMFLQAMQDVRAGGRQSNAQYQFTLQSDDLALLREWTPKITEALK 687 Query: 61 RDPDLADVNSDQQNKGLESDLVTDRDAAARLGITVSQIDNTLYDAFGQRQVSTIYVARNQ 120 R+PDL DVNSD Q KGLE L +RD AARLG+++SQI NTLYDAFGQRQVSTIY NQ Sbjct: 688 RNPDLVDVNSDTQEKGLEMQLDINRDTAARLGLSMSQISNTLYDAFGQRQVSTIYAPLNQ 747 Query: 121 YHVIMEVAPRYWQNPETLKDVYISTSGGSVGGSQSTNAVAGTVVAPGTSSAASAANA--- 177 YHV+MEVAPRYWQ+P TL D+ ISTSG ++ GS +T +V + + SSA SAA Sbjct: 748 YHVVMEVAPRYWQDPRTLDDIRISTSGAALAGSLATASVTSQITS-TVSSALSAATGTTD 806 Query: 178 ---QAARNQATNSIGSTGKGVASTGSAVSTSSETMIPLSEVAAFKQGATPLAVNHQGLLV 234 A RN +TN I +T K STG+AVST IPLS A++ G PLAVNHQGL Sbjct: 807 TTLDAVRNASTNRIANTTKSGTSTGAAVSTRFSPSIPLSAFASYGPGNAPLAVNHQGLFA 866 Query: 235 ANTISFNLPPNVSLSTAVGSIEATMNRIGVPATIRGTFQGTAKAFQDSLSNQPFLILAA 293 A TISFNLP ++ AV SI+ TM IG PA++ GTFQGTAK FQ SLS+QP LIL A Sbjct: 867 AATISFNLPEGKTIGDAVASIQRTMVEIGTPASVHGTFQGTAKVFQQSLSSQPLLILLA 925 Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 146/295 (49%), Positives = 190/295 (64%), Gaps = 45/295 (15%) Query: 291 LAAASSSQKSSVSAVAANVVRNQATNSIGATGKGVASTGTAVSTSAETMIPLSSVARFEH 350 L+AA+ + +++ AV RN +TN I T K STG AVST IPLS+ A + Sbjct: 798 LSAATGTTDTTLDAV-----RNASTNRIANTTKSGTSTGAAVSTRFSPSIPLSAFASYGP 852 Query: 351 GETPLSVNHQDLLVSSTISFNLPPGVSLSTATTTIENAMHALGMPAGISGGFAGSAKIFQ 410 G PL+VNHQ L ++TISFNLP G ++ A +I+ M +G PA + G F G+AK+FQ Sbjct: 853 GNAPLAVNHQGLFAAATISFNLPEGKTIGDAVASIQRTMVEIGTPASVHGTFQGTAKVFQ 912 Query: 411 QALANELFLILAALATIYISLGMLYESYIHPLTILSTLPSAGVGAVAALMLSHTDFDIIG 470 Q+L+++ LIL ALAT+Y+ LG+LYES+IHP+TILSTLPSAG+GAV AL+ +T+F +I Sbjct: 913 QSLSSQPLLILLALATVYVVLGVLYESFIHPITILSTLPSAGLGAVLALIAFNTEFSLIA 972 Query: 471 MIGVILLVGIVKXILSTLPSAGVGALLALMAFKTEFSIMALIGVILLIGIVKKNAIMMID 530 +IGVILL+GI VKKNAIMM+D Sbjct: 973 LIGVILLIGI----------------------------------------VKKNAIMMVD 992 Query: 531 FALEAERRRGLEPLEAIREACLLRFRPIMMTTMAALLGAVPLAIGMGDGGELRQP 585 FALEAER++GL P AIREACL RFRPI+MTT+AA+ GA+PLA+ G G ELRQP Sbjct: 993 FALEAERQQGLPPAAAIREACLQRFRPILMTTLAAVFGALPLALASGTGAELRQP 1047 >ref|ZP_02375302.1| AcrB/AcrD/AcrF family protein [Burkholderia thailandensis TXDOH] Length = 1100 Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 189/301 (62%), Positives = 222/301 (73%), Gaps = 8/301 (2%) Query: 1 VIARLRREMSVVPGASLFLQAVQDIRVGGRASNAQYQYTLQGSTLEELNEWTPKIAAALQ 60 VI +LR ++ V GA FLQA QDIR GGR SNAQYQ+TL G + EL +W P + ALQ Sbjct: 628 VIQQLRPRLAEVAGARTFLQAAQDIRAGGRQSNAQYQFTLLGDSTAELYKWAPILTEALQ 687 Query: 61 RDPDLADVNSDQQNKGLESDLVTDRDAAARLGITVSQIDNTLYDAFGQRQVSTIYVARNQ 120 + P+LADVNSDQQ GLE+ + DR AARLGI +QIDNTLYDAFGQRQVSTIY NQ Sbjct: 688 KRPELADVNSDQQQGGLEAMVTIDRATAARLGIKPAQIDNTLYDAFGQRQVSTIYNPLNQ 747 Query: 121 YHVIMEVAPRYWQNPETLKDVYISTSGGSVGGSQSTNAVAGTVV--------APGTSSAA 172 YHV+MEVAP+YWQ+PE LK +YISTSGGS G+Q+TNA AGT V A + +A Sbjct: 748 YHVVMEVAPQYWQSPEMLKQIYISTSGGSASGAQTTNAAAGTYVAASARASTAGAAAQSA 807 Query: 173 SAANAQAARNQATNSIGSTGKGVASTGSAVSTSSETMIPLSEVAAFKQGATPLAVNHQGL 232 +A A +ARNQA NSI S+GK AS+G+AVSTS TM+PLS +A+F TPLAVNHQGL Sbjct: 808 AAIAADSARNQALNSIASSGKSGASSGAAVSTSKSTMVPLSAIASFGPSTTPLAVNHQGL 867 Query: 233 LVANTISFNLPPNVSLSTAVGSIEATMNRIGVPATIRGTFQGTAKAFQDSLSNQPFLILA 292 VA TISFNLPP VSLS A I TM +GVP TI+G+FQGTA+AFQ SL +QP LILA Sbjct: 868 FVATTISFNLPPGVSLSKATQVIYQTMAEVGVPPTIQGSFQGTAQAFQQSLKDQPILILA 927 Query: 293 A 293 A Sbjct: 928 A 928 Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 161/275 (58%), Positives = 189/275 (68%), Gaps = 41/275 (14%) Query: 311 RNQATNSIGATGKGVASTGTAVSTSAETMIPLSSVARFEHGETPLSVNHQDLLVSSTISF 370 RNQA NSI ++GK AS+G AVSTS TM+PLS++A F TPL+VNHQ L V++TISF Sbjct: 816 RNQALNSIASSGKSGASSGAAVSTSKSTMVPLSAIASFGPSTTPLAVNHQGLFVATTISF 875 Query: 371 NLPPGVSLSTATTTIENAMHALGMPAGISGGFAGSAKIFQQALANELFLILAALATIYIS 430 NLPPGVSLS AT I M +G+P I G F G+A+ FQQ+L ++ LILAALA +YI Sbjct: 876 NLPPGVSLSKATQVIYQTMAEVGVPPTIQGSFQGTAQAFQQSLKDQPILILAALAAVYIV 935 Query: 431 LGMLYESYIHPLTILSTLPSAGVGAVAALMLSHTDFDIIGMIGVILLVGIVKXILSTLPS 490 LG+LYESYIHP+TILS TLPS Sbjct: 936 LGILYESYIHPVTILS----------------------------------------TLPS 955 Query: 491 AGVGALLALMAFKTEFSIMALIGVILLIGIVKKNAIMMIDFALEAERRRGLEPLEAIREA 550 AGVGALL L+ FKTEFSI+ALIGVILLIGIVKKNAIMM+DFA++A R+G +AI EA Sbjct: 956 AGVGALLGLLLFKTEFSIIALIGVILLIGIVKKNAIMMVDFAIDAS-RQGKSSFDAIHEA 1014 Query: 551 CLLRFRPIMMTTMAALLGAVPLAIGMGDGGELRQP 585 CLLRFRPIMMTTMAALLGA+PLA G GDG E+R P Sbjct: 1015 CLLRFRPIMMTTMAALLGALPLAFGSGDGAEMRAP 1049