BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0193.0010.p         (165 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_578790.1| acriflavin resistance protein [Nitrobacter hamb...   186   7e-46
ref|YP_003976629.1| multidrug resistance protein [Achromobacter ...   145   2e-33
ref|ZP_02894051.1| acriflavin resistance protein [Burkholderia a...   142   2e-32
ref|YP_772971.1| acriflavin resistance protein [Burkholderia amb...   142   2e-32
ref|ZP_06685622.1| multidrug RND efflux transporter [Achromobact...   142   2e-32

>ref|YP_578790.1| acriflavin resistance protein [Nitrobacter hamburgensis X14]
 gb|ABE64330.1| acriflavin resistance protein [Nitrobacter hamburgensis X14]
          Length = 1096

 Score =  186 bits (473), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 103/125 (82%), Gaps = 1/125 (0%)

Query: 1   VLSMSISLIAVFIPILLMAGIVGRLFREFAMVISISILISLAVSLATTPMMCAVLLKRDA 60
           VLSMS+SLIAVFIPILLM GIVGRLFREFAM ISI+I+ISLA+SLATTPMMCA+LL+R +
Sbjct: 435 VLSMSVSLIAVFIPILLMGGIVGRLFREFAMTISIAIMISLAISLATTPMMCAILLRRQS 494

Query: 61  G-GHGRLYWASERFFEAMLNFYRRTLTAALAHPLSVMLILAAVFGLNFYLYDVIPKGFFX 119
              HGRLY ASE  F AMLN YRR+L  AL HP SVM+IL  + GLNFYLYDVIPKGFF 
Sbjct: 495 DRSHGRLYQASEHVFTAMLNGYRRSLNVALRHPRSVMMILLTILGLNFYLYDVIPKGFFP 554

Query: 120 RSSSA 124
           +  + 
Sbjct: 555 QQDTG 559


>ref|YP_003976629.1| multidrug resistance protein [Achromobacter xylosoxidans A8]
 gb|ADP13914.1| multidrug resistance protein MdtC 1 [Achromobacter xylosoxidans A8]
          Length = 1037

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/128 (59%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   VLSMSISLIAVFIPILLMAGIVGRLFREFAMVISISILISLAVSLATTPMMCAVLLKRDA 60
           VLSMS+SL+AVFIPILLM G+VGRLFREFA+ +S +I++SL VSL  TPMMCA LL+++A
Sbjct: 435 VLSMSLSLVAVFIPILLMGGVVGRLFREFAVTLSAAIIVSLVVSLTLTPMMCARLLRQEA 494

Query: 61  GGH---GRLYWASERFFEAMLNFYRRTLTAALAHPLSVMLILAAVFGLNFYLYDVIPKGF 117
                 GRL   SER FE+ML+ YRR+L  AL H   +MLILA   GLN YLY V+PKGF
Sbjct: 495 PEEKPPGRLARWSERGFESMLDGYRRSLRWALTHSRLMMLILAVAVGLNVYLYTVVPKGF 554

Query: 118 FXRSSSAS 125
           F +  +  
Sbjct: 555 FPQQDTGQ 562


>ref|ZP_02894051.1| acriflavin resistance protein [Burkholderia ambifaria IOP40-10]
 gb|EDT00367.1| acriflavin resistance protein [Burkholderia ambifaria IOP40-10]
          Length = 1102

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/126 (60%), Positives = 91/126 (72%), Gaps = 2/126 (1%)

Query: 1   VLSMSISLIAVFIPILLMAGIVGRLFREFAMVISISILISLAVSLATTPMMCAVLLKR-- 58
           VLSMSISL+AVF+PILLM GIVGRLFREFA+ +S++I +SLAVSL  TPMMCA LL+   
Sbjct: 435 VLSMSISLVAVFLPILLMGGIVGRLFREFALTLSLAIAVSLAVSLTVTPMMCARLLREPH 494

Query: 59  DAGGHGRLYWASERFFEAMLNFYRRTLTAALAHPLSVMLILAAVFGLNFYLYDVIPKGFF 118
           DA   GRL    ERFF  M   Y R+L+ AL  PL V+LIL A  GLN YLY ++PKGFF
Sbjct: 495 DAHEEGRLGRFLERFFTRMQRGYERSLSWALRRPLLVLLILFATIGLNVYLYIIVPKGFF 554

Query: 119 XRSSSA 124
            +  + 
Sbjct: 555 PQQDTG 560


>ref|YP_772971.1| acriflavin resistance protein [Burkholderia ambifaria AMMD]
 gb|ABI86637.1| acriflavin resistance protein [Burkholderia ambifaria AMMD]
          Length = 1102

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/126 (60%), Positives = 91/126 (72%), Gaps = 2/126 (1%)

Query: 1   VLSMSISLIAVFIPILLMAGIVGRLFREFAMVISISILISLAVSLATTPMMCAVLLKR-- 58
           VLSMSISL+AVF+PILLM GIVGRLFREFA+ +S++I +SLAVSL  TPMMCA LL+   
Sbjct: 435 VLSMSISLVAVFLPILLMGGIVGRLFREFALTLSLAIAVSLAVSLTVTPMMCARLLREPH 494

Query: 59  DAGGHGRLYWASERFFEAMLNFYRRTLTAALAHPLSVMLILAAVFGLNFYLYDVIPKGFF 118
           DA   GRL    ERFF  M   Y R+L+ AL  PL V+LIL A  GLN YLY ++PKGFF
Sbjct: 495 DAHEEGRLGRFLERFFTRMQRGYERSLSWALRRPLLVLLILFATIGLNVYLYIIVPKGFF 554

Query: 119 XRSSSA 124
            +  + 
Sbjct: 555 PQQDTG 560


>ref|ZP_06685622.1| multidrug RND efflux transporter [Achromobacter piechaudii ATCC
           43553]
 gb|EFF77468.1| multidrug RND efflux transporter [Achromobacter piechaudii ATCC
           43553]
          Length = 1037

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/128 (59%), Positives = 92/128 (71%), Gaps = 3/128 (2%)

Query: 1   VLSMSISLIAVFIPILLMAGIVGRLFREFAMVISISILISLAVSLATTPMMCAVLLK--- 57
           VLSMS+SL+AVFIPILLM G+VGRLFREFA+ +S +I++SL VSL  TPMMCA LL+   
Sbjct: 435 VLSMSLSLVAVFIPILLMGGVVGRLFREFAVTLSAAIMVSLVVSLTLTPMMCARLLRPEP 494

Query: 58  RDAGGHGRLYWASERFFEAMLNFYRRTLTAALAHPLSVMLILAAVFGLNFYLYDVIPKGF 117
           +DA   GRL   SER FEAM + YRR+L  ALAH   +ML LA   GLN YLY  +PKGF
Sbjct: 495 KDAKPPGRLARWSERGFEAMQDGYRRSLRWALAHGRLMMLTLAVAVGLNVYLYMAVPKGF 554

Query: 118 FXRSSSAS 125
           F +  +  
Sbjct: 555 FPQQDTGQ 562