BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0193.0008.p         (128 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001990896.1| hypothetical protein Rpal_1898 [Rhodopseudom...   162   2e-38
ref|NP_947044.1| hypothetical protein RPA1698 [Rhodopseudomonas ...   161   4e-38
ref|YP_004110124.1| hypothetical protein Rpdx1_3826 [Rhodopseudo...   159   2e-37
ref|NP_773258.1| hypothetical protein blr6618 [Bradyrhizobium ja...   138   2e-31
ref|YP_002520262.1| hypothetical protein RSKD131_3329 [Rhodobact...    99   2e-19

>ref|YP_001990896.1| hypothetical protein Rpal_1898 [Rhodopseudomonas palustris TIE-1]
 gb|ACF00421.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           TIE-1]
          Length = 247

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/126 (64%), Positives = 97/126 (76%)

Query: 1   MSIAFGGKWADGAIGFAGGILGGLAGLSGPLPILWASVRGWGKQQRRGVFQIFNFTILAA 60
           M++ FGG+W DG IG+ GG++GG AGLSGP PILWASVRGW K QRRGVFQ FN T+L A
Sbjct: 119 MALTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWDKHQRRGVFQAFNSTVLIA 178

Query: 61  ALCVQIASGLVKPELIWLVACAFPGTLLGAWLGARLYHALSDRNFSDVVLLLLFLSGVAL 120
           AL +Q A GLV  ++++    A P  LLGAWLGAR YHALSDR+F +VVL LLFLSG+ L
Sbjct: 179 ALALQTAHGLVTRDVLYAAVLALPAILLGAWLGARTYHALSDRSFRNVVLALLFLSGLTL 238

Query: 121 VWNGLA 126
           VW+  A
Sbjct: 239 VWSSFA 244


>ref|NP_947044.1| hypothetical protein RPA1698 [Rhodopseudomonas palustris CGA009]
 emb|CAE27139.1| DUF81 [Rhodopseudomonas palustris CGA009]
          Length = 247

 Score =  161 bits (407), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 81/126 (64%), Positives = 97/126 (76%)

Query: 1   MSIAFGGKWADGAIGFAGGILGGLAGLSGPLPILWASVRGWGKQQRRGVFQIFNFTILAA 60
           M++ FGG+W DG IG+ GG++GG AGLSGP PILWASVRGW K QRRGVFQ FN T+L A
Sbjct: 119 MALTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWDKHQRRGVFQAFNSTVLIA 178

Query: 61  ALCVQIASGLVKPELIWLVACAFPGTLLGAWLGARLYHALSDRNFSDVVLLLLFLSGVAL 120
           AL +Q A GLV  ++++    A P  LLGAWLGAR YHALSDR+F +VVL LLFLSG+ L
Sbjct: 179 ALALQTAHGLVTRDVLYAAVLALPAILLGAWLGARNYHALSDRSFRNVVLALLFLSGLTL 238

Query: 121 VWNGLA 126
           VW+  A
Sbjct: 239 VWSSFA 244


>ref|YP_004110124.1| hypothetical protein Rpdx1_3826 [Rhodopseudomonas palustris DX-1]
 gb|ADU45391.1| protein of unknown function DUF81 [Rhodopseudomonas palustris DX-1]
          Length = 247

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/126 (62%), Positives = 96/126 (76%)

Query: 1   MSIAFGGKWADGAIGFAGGILGGLAGLSGPLPILWASVRGWGKQQRRGVFQIFNFTILAA 60
           M++ FGG+W DG IG+ GG++GG AGLSGP PILWAS+RGW K QRRGVFQ FN T+L A
Sbjct: 119 MALTFGGRWMDGVIGWVGGVMGGFAGLSGPPPILWASIRGWDKHQRRGVFQAFNSTVLIA 178

Query: 61  ALCVQIASGLVKPELIWLVACAFPGTLLGAWLGARLYHALSDRNFSDVVLLLLFLSGVAL 120
           AL +Q A GLV  +++     A P  L+GAWLGAR YHALSDR+F +VVL LLFLSG +L
Sbjct: 179 ALILQTAHGLVTRQVLHAALFALPAILIGAWLGARTYHALSDRSFRNVVLALLFLSGASL 238

Query: 121 VWNGLA 126
           VW+  A
Sbjct: 239 VWSSFA 244


>ref|NP_773258.1| hypothetical protein blr6618 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51883.1| blr6618 [Bradyrhizobium japonicum USDA 110]
          Length = 218

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/125 (72%), Positives = 108/125 (86%)

Query: 1   MSIAFGGKWADGAIGFAGGILGGLAGLSGPLPILWASVRGWGKQQRRGVFQIFNFTILAA 60
           ++I FGG+ ADGAIGFAGGILGGLAGLSGPLPILWA++RGW K +RRG+FQ+FNFT+LA 
Sbjct: 91  LAITFGGRIADGAIGFAGGILGGLAGLSGPLPILWANIRGWNKHERRGIFQLFNFTVLAT 150

Query: 61  ALCVQIASGLVKPELIWLVACAFPGTLLGAWLGARLYHALSDRNFSDVVLLLLFLSGVAL 120
           AL +Q ASGLV  +++WL   AFPGTL+GAW GAR+YHALSD++F DVVL LLFLSG+ L
Sbjct: 151 ALVLQTASGLVAFKVVWLALVAFPGTLIGAWAGARVYHALSDKHFGDVVLGLLFLSGLGL 210

Query: 121 VWNGL 125
           VWN L
Sbjct: 211 VWNSL 215


>ref|YP_002520262.1| hypothetical protein RSKD131_3329 [Rhodobacter sphaeroides KD131]
 gb|ACM03189.1| Hypothetical Protein RSKD131_3329 [Rhodobacter sphaeroides KD131]
          Length = 253

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 74/116 (63%)

Query: 10  ADGAIGFAGGILGGLAGLSGPLPILWASVRGWGKQQRRGVFQIFNFTILAAALCVQIASG 69
           AD A+GF+GG LGG A LSG LP +W ++  W +Q++RGV Q FN TIL A + +    G
Sbjct: 131 ADMAVGFSGGFLGGAASLSGALPTMWCTLHAWTRQEQRGVMQPFNVTILGATVVLLALQG 190

Query: 70  LVKPELIWLVACAFPGTLLGAWLGARLYHALSDRNFSDVVLLLLFLSGVALVWNGL 125
               E + L+A A P T+L A +G RL+  L+D  F  +++LLLF+SG +++   L
Sbjct: 191 AYTAETLLLIAGALPVTMLAAQVGVRLFARLTDAQFKRLLILLLFVSGASILVQEL 246