BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0121.p (542 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767331.1| hypothetical protein blr0691 [Bradyrhizobium ja... 867 0.0 ref|YP_001237742.1| putative transport protein permease [Bradyrh... 835 0.0 ref|YP_001208032.1| putative transport protein permease [Bradyrh... 819 0.0 ref|ZP_08630588.1| major facilitator superfamily protein [Bradyr... 689 0.0 ref|YP_483830.1| major facilitator transporter [Rhodopseudomonas... 645 0.0 >ref|NP_767331.1| hypothetical protein blr0691 [Bradyrhizobium japonicum USDA 110] dbj|BAC45956.1| blr0691 [Bradyrhizobium japonicum USDA 110] Length = 542 Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/542 (79%), Positives = 475/542 (87%) Query: 1 MAESDDRDRGPVSRGDVARYPLFAVVAVLLGAFLANFDSRLTSVGLPDLRGAFSLSFDEG 60 MA +DD DRGP+SRG VA P+FAV AVLLG+FLANFDSRLT+VGLPDLRGAFSLSFDEG Sbjct: 1 MAGNDDSDRGPLSRGGVAPQPMFAVAAVLLGSFLANFDSRLTTVGLPDLRGAFSLSFDEG 60 Query: 61 AWLSTAAIGSQIFVAPAVAWLATVFGLRRVLGIPSLVYAVVSLTIPFVRDYTMLITLSIA 120 AWLSTA IGSQIF+APAVAWLAT FGLRRVLGIPSLVYA VSL IPFV DY LI LS+ Sbjct: 61 AWLSTAGIGSQIFIAPAVAWLATAFGLRRVLGIPSLVYAAVSLIIPFVHDYPTLIALSVV 120 Query: 121 HGMLLGTFVPATLMIILRNLPIRWWLPAIAMYSIRVGFALDSSSSLVGFYVEHLGWQWLY 180 HG+LLGTFVPATLMI+ RNLPIRWWLPAI++YSIRVGFALD+SSSLVGFYV+HLGWQWLY Sbjct: 121 HGLLLGTFVPATLMIVFRNLPIRWWLPAISIYSIRVGFALDTSSSLVGFYVDHLGWQWLY 180 Query: 181 WQGVVIAPLMGLMVYLGTPNEPVNRDLLHHADWGGMLLLGAGVSMVYAGLDQGNRLDWLS 240 WQGVVIAPLMGLMVYLGTP+EPVNR LL ADWGGMLLLGA VSM+YAGLDQGNRLDWL Sbjct: 181 WQGVVIAPLMGLMVYLGTPSEPVNRALLRDADWGGMLLLGASVSMIYAGLDQGNRLDWLG 240 Query: 241 SGTVMALLIGGGLLIIAFMINEMVARRPWAHFNVLFSRNIGLSLIVILLYTLTSLSNSSL 300 SGTVMALL G +L F++NE + R+PWAH NVLFSRNIGLSL+VILLYTLTSLSNSSL Sbjct: 241 SGTVMALLAAGAVLFAGFLVNESLVRQPWAHVNVLFSRNIGLSLVVILLYTLTSLSNSSL 300 Query: 301 VPNFLGTIGALRPEQSGVLLFTYGALPMFVLVPISILLLRHFDPRIVVVLGFSAFAAANL 360 VPNFLG +G LRPEQSG+LL TYGALPMFVLVPISI LLRHFD R+V VLGF+ FAAANL Sbjct: 301 VPNFLGNVGLLRPEQSGLLLLTYGALPMFVLVPISIWLLRHFDARVVTVLGFACFAAANL 360 Query: 361 WGTQLSHVWAREDFVGIVLLTSIGQAFTLLPIIIMALSNSDPSRATAFTAYIQIMRLGGA 420 WGTQL+H WAREDF+GIVLL S+GQ+ TLLPIIIMALSNSDPSRAT+F AYIQIMRLGGA Sbjct: 361 WGTQLTHDWAREDFIGIVLLQSVGQSTTLLPIIIMALSNSDPSRATSFAAYIQIMRLGGA 420 Query: 421 EIGVALMVTWLRVREQIHSNYLGQHVQNGDIDVVNLLKRLAGEFSGHGIGTATGRAVGTL 480 EIGVALM TWLRVREQ+HS YLGQ++ GD+DVV LK+LA F+ HG G A RAVGTL Sbjct: 421 EIGVALMGTWLRVREQVHSFYLGQNLGVGDVDVVRTLKQLADHFAAHGAGLAQARAVGTL 480 Query: 481 AALVQREANTLAYIDGFWLCFWLAILALVLVAFITRAPQGPLSPAPLGFVKNVMRRLGAA 540 A+ VQREAN LAYIDGFWLCFWLA+ AL +VA ITRAP GP +PAP GF K ++R+ GA Sbjct: 481 ASFVQREANVLAYIDGFWLCFWLAMAALGVVALITRAPPGPFTPAPFGFAKMLLRKCGAQ 540 Query: 541 AS 542 + Sbjct: 541 VT 542 >ref|YP_001237742.1| putative transport protein permease [Bradyrhizobium sp. BTAi1] gb|ABQ33836.1| putative transport protein (permease) [Bradyrhizobium sp. BTAi1] Length = 545 Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/539 (77%), Positives = 465/539 (86%), Gaps = 3/539 (0%) Query: 1 MAESD---DRDRGPVSRGDVARYPLFAVVAVLLGAFLANFDSRLTSVGLPDLRGAFSLSF 57 MA S+ + DRGP+SRG +A +PLFAV AVLLG+FLANFDSRLTSVGLPDLRGAFSL F Sbjct: 1 MAPSENAGEADRGPLSRGGLAAHPLFAVGAVLLGSFLANFDSRLTSVGLPDLRGAFSLGF 60 Query: 58 DEGAWLSTAAIGSQIFVAPAVAWLATVFGLRRVLGIPSLVYAVVSLTIPFVRDYTMLITL 117 DEGAWLSTAAIGSQI +APAVAWLATVFGLRRVLG+PSLVYA +SL IPFVRDY LI L Sbjct: 61 DEGAWLSTAAIGSQILIAPAVAWLATVFGLRRVLGVPSLVYAALSLIIPFVRDYPTLIVL 120 Query: 118 SIAHGMLLGTFVPATLMIILRNLPIRWWLPAIAMYSIRVGFALDSSSSLVGFYVEHLGWQ 177 +I HGMLLGTFVPATLMII RNLPIRWWLPAI++Y+IRVGFALD+S+SLVGFYVEHLGWQ Sbjct: 121 AILHGMLLGTFVPATLMIIFRNLPIRWWLPAISIYAIRVGFALDTSTSLVGFYVEHLGWQ 180 Query: 178 WLYWQGVVIAPLMGLMVYLGTPNEPVNRDLLHHADWGGMLLLGAGVSMVYAGLDQGNRLD 237 WLYWQ VV+APLM LMVYLGTP EPVNR LL +ADWGGMLLLG+ VSM+YAGLDQGNRLD Sbjct: 181 WLYWQSVVLAPLMALMVYLGTPAEPVNRTLLRNADWGGMLLLGSAVSMIYAGLDQGNRLD 240 Query: 238 WLSSGTVMALLIGGGLLIIAFMINEMVARRPWAHFNVLFSRNIGLSLIVILLYTLTSLSN 297 WL SGTV+ALL GG +L + F++NE ++ +PWAHFNVLFSRNIGLSL VILLYTLTSLSN Sbjct: 241 WLQSGTVVALLGGGAVLFVLFLVNEALSPQPWAHFNVLFSRNIGLSLAVILLYTLTSLSN 300 Query: 298 SSLVPNFLGTIGALRPEQSGVLLFTYGALPMFVLVPISILLLRHFDPRIVVVLGFSAFAA 357 +SLVPNFL TI LRPEQSG LL YGALP+ VLVP+SI +LRH DPRIVVVLG AFAA Sbjct: 301 ASLVPNFLATITQLRPEQSGSLLLVYGALPLIVLVPLSIWMLRHLDPRIVVVLGLGAFAA 360 Query: 358 ANLWGTQLSHVWAREDFVGIVLLTSIGQAFTLLPIIIMALSNSDPSRATAFTAYIQIMRL 417 ANL GTQL+H WAREDF+ IVLL S GQAFTLLPIII+ALSNSDP+RAT+F AYIQIMRL Sbjct: 361 ANLLGTQLTHAWAREDFIVIVLLQSFGQAFTLLPIIILALSNSDPARATSFAAYIQIMRL 420 Query: 418 GGAEIGVALMVTWLRVREQIHSNYLGQHVQNGDIDVVNLLKRLAGEFSGHGIGTATGRAV 477 GGAEIGVALM TWLRVREQ+HS YLG ++Q+GD+DV L+RL G F+ HG G A RAV Sbjct: 421 GGAEIGVALMGTWLRVREQVHSAYLGLNIQSGDVDVARALQRLTGYFASHGTGLAKARAV 480 Query: 478 GTLAALVQREANTLAYIDGFWLCFWLAILALVLVAFITRAPQGPLSPAPLGFVKNVMRR 536 GTLAA VQREAN LAY+D FWLCFWLAI ALVL A ITRAP GP SP PLG N +RR Sbjct: 481 GTLAAQVQREANVLAYLDAFWLCFWLAIAALVLTALITRAPPGPFSPTPLGLRTNWLRR 539 >ref|YP_001208032.1| putative transport protein permease [Bradyrhizobium sp. ORS 278] emb|CAL79817.1| putative transport protein (permease) [Bradyrhizobium sp. ORS 278] Length = 549 Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/546 (76%), Positives = 459/546 (84%), Gaps = 7/546 (1%) Query: 1 MAESDDR-------DRGPVSRGDVARYPLFAVVAVLLGAFLANFDSRLTSVGLPDLRGAF 53 MA SD DRGP+SRG VA PLFAV AVLLG+FLANFDSRLTSVGLPDLRGAF Sbjct: 1 MAASDPTSESISAADRGPLSRGGVAPQPLFAVGAVLLGSFLANFDSRLTSVGLPDLRGAF 60 Query: 54 SLSFDEGAWLSTAAIGSQIFVAPAVAWLATVFGLRRVLGIPSLVYAVVSLTIPFVRDYTM 113 L FD+GAWLSTAAIGSQIF+APAVAWLAT FGLRRVLG+PSL+YA VSL IPFVRDY Sbjct: 61 GLGFDQGAWLSTAAIGSQIFIAPAVAWLATAFGLRRVLGVPSLIYAAVSLIIPFVRDYPT 120 Query: 114 LITLSIAHGMLLGTFVPATLMIILRNLPIRWWLPAIAMYSIRVGFALDSSSSLVGFYVEH 173 LITL+I HGMLLGTFVPATLMI+ RNLPIRWWLPAI++YSIRVG ALD+S+SLVGFYVEH Sbjct: 121 LITLAIIHGMLLGTFVPATLMIVFRNLPIRWWLPAISIYSIRVGVALDTSTSLVGFYVEH 180 Query: 174 LGWQWLYWQGVVIAPLMGLMVYLGTPNEPVNRDLLHHADWGGMLLLGAGVSMVYAGLDQG 233 LGWQWLYWQGVV+APLM LMVYLGTP+EPVNR LL +ADWGGMLLLG+ VSM+YAGLDQG Sbjct: 181 LGWQWLYWQGVVLAPLMALMVYLGTPSEPVNRTLLENADWGGMLLLGSAVSMIYAGLDQG 240 Query: 234 NRLDWLSSGTVMALLIGGGLLIIAFMINEMVARRPWAHFNVLFSRNIGLSLIVILLYTLT 293 NRLDWL SGTV+ALL GG +L + F++NE +A +PWAH NVL SRNIGLSL VILLYTLT Sbjct: 241 NRLDWLQSGTVVALLAGGAVLFVLFLVNEALAPQPWAHVNVLLSRNIGLSLAVILLYTLT 300 Query: 294 SLSNSSLVPNFLGTIGALRPEQSGVLLFTYGALPMFVLVPISILLLRHFDPRIVVVLGFS 353 SLSN+SLVPNFL TI LRPEQSG LL YGALPM VLVP+SI +LRH DPRIVVV G S Sbjct: 301 SLSNASLVPNFLATITQLRPEQSGSLLLLYGALPMLVLVPLSIAMLRHLDPRIVVVFGLS 360 Query: 354 AFAAANLWGTQLSHVWAREDFVGIVLLTSIGQAFTLLPIIIMALSNSDPSRATAFTAYIQ 413 AFAAANL GTQL+H WAREDF+ IV+L SIGQA TLLPIII+ALSNSDP+RAT+F AYIQ Sbjct: 361 AFAAANLMGTQLTHAWAREDFIVIVVLQSIGQALTLLPIIILALSNSDPARATSFAAYIQ 420 Query: 414 IMRLGGAEIGVALMVTWLRVREQIHSNYLGQHVQNGDIDVVNLLKRLAGEFSGHGIGTAT 473 IMRLGGAEIGVALM TWLRVREQ+HS LG ++Q GD DV L+RL G F+ HG A Sbjct: 421 IMRLGGAEIGVALMGTWLRVREQMHSATLGLNIQRGDGDVARALQRLTGFFTAHGGAQAK 480 Query: 474 GRAVGTLAALVQREANTLAYIDGFWLCFWLAILALVLVAFITRAPQGPLSPAPLGFVKNV 533 RA+GTLAA VQREAN LAY+D FWLCFWLAI AL LVA ITRAP GP SP P+ F Sbjct: 481 ARAIGTLAAEVQREANVLAYLDAFWLCFWLAITALGLVALITRAPPGPFSPTPVRFGAGW 540 Query: 534 MRRLGA 539 ++R+ A Sbjct: 541 VKRIAA 546 >ref|ZP_08630588.1| major facilitator superfamily protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06967.1| major facilitator superfamily protein [Bradyrhizobiaceae bacterium SG-6C] Length = 527 Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/524 (68%), Positives = 425/524 (81%) Query: 1 MAESDDRDRGPVSRGDVARYPLFAVVAVLLGAFLANFDSRLTSVGLPDLRGAFSLSFDEG 60 MAE+ GPVS G YPL AV AVLLGA +AN DSR+ S+GLPDL+GAFSLSFD+G Sbjct: 1 MAETKIIASGPVSTGQPVHYPLLAVAAVLLGASMANIDSRMFSIGLPDLKGAFSLSFDQG 60 Query: 61 AWLSTAAIGSQIFVAPAVAWLATVFGLRRVLGIPSLVYAVVSLTIPFVRDYTMLITLSIA 120 AWLSTA+ SQIF+APAVAWLAT FGLRR+LG PS+V+AV+SL +PF+RDY L+ L+I Sbjct: 61 AWLSTASTASQIFIAPAVAWLATTFGLRRILGAPSIVFAVISLILPFIRDYPTLMGLTIL 120 Query: 121 HGMLLGTFVPATLMIILRNLPIRWWLPAIAMYSIRVGFALDSSSSLVGFYVEHLGWQWLY 180 HG+LLGTFVPATLMII RNLP++WWL AI +Y++RVGF+L+ +LVGFYVEH+GWQWLY Sbjct: 121 HGLLLGTFVPATLMIIFRNLPMQWWLIAIGIYALRVGFSLNFGPALVGFYVEHVGWQWLY 180 Query: 181 WQGVVIAPLMGLMVYLGTPNEPVNRDLLHHADWGGMLLLGAGVSMVYAGLDQGNRLDWLS 240 WQ ++A LM ++VYLG P +PVN+ LL ADWGGMLLLG G++MVYAGLDQGNRLDWLS Sbjct: 181 WQDALLAVLMAILVYLGAPRDPVNKALLETADWGGMLLLGTGIAMVYAGLDQGNRLDWLS 240 Query: 241 SGTVMALLIGGGLLIIAFMINEMVARRPWAHFNVLFSRNIGLSLIVILLYTLTSLSNSSL 300 SGTV+ALL G L++AF INE + R PWAH NVL SRNIG +L+VILLYTLTSLSNSSL Sbjct: 241 SGTVVALLASGAALLVAFFINEALVRDPWAHANVLLSRNIGFALVVILLYTLTSLSNSSL 300 Query: 301 VPNFLGTIGALRPEQSGVLLFTYGALPMFVLVPISILLLRHFDPRIVVVLGFSAFAAANL 360 VPNFL +G LRPEQ+G LL YG LPM VL P+SI L R+FD RI+++LG AFAAA L Sbjct: 301 VPNFLLNVGQLRPEQTGHLLLIYGVLPMAVLFPLSIWLARNFDARILILLGLVAFAAAAL 360 Query: 361 WGTQLSHVWAREDFVGIVLLTSIGQAFTLLPIIIMALSNSDPSRATAFTAYIQIMRLGGA 420 GT++++ W EDF+ IVLL S+GQ+FTLLPII+ AL+NSDP+RATAF AYIQIMRLGGA Sbjct: 361 LGTRITNEWRLEDFIPIVLLQSVGQSFTLLPIILTALANSDPTRATAFAAYIQIMRLGGA 420 Query: 421 EIGVALMVTWLRVREQIHSNYLGQHVQNGDIDVVNLLKRLAGEFSGHGIGTATGRAVGTL 480 E G+ALM TWLRVREQIHSN +GQHV + V++LL +L+G F+GHG GTA GR+VG L Sbjct: 421 EFGIALMGTWLRVREQIHSNLIGQHVTHAKDQVLDLLAKLSGYFAGHGTGTAMGRSVGKL 480 Query: 481 AALVQREANTLAYIDGFWLCFWLAILALVLVAFITRAPQGPLSP 524 A +VQREAN LAYIDGFWL F AI L+ A ITRAP GP SP Sbjct: 481 AGIVQREANVLAYIDGFWLTFIFAIAGLLCAAMITRAPPGPFSP 524 >ref|YP_483830.1| major facilitator transporter [Rhodopseudomonas palustris HaA2] gb|ABD04919.1| Major facilitator superfamily MFS_1 [Rhodopseudomonas palustris HaA2] Length = 527 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/524 (62%), Positives = 403/524 (76%) Query: 1 MAESDDRDRGPVSRGDVARYPLFAVVAVLLGAFLANFDSRLTSVGLPDLRGAFSLSFDEG 60 M+ + + GPVS G + PLFAV AVLLG+FL+NFDSRL ++ LPDLRGA SLSFD+G Sbjct: 1 MSTAHIVESGPVSTGGIGPRPLFAVGAVLLGSFLSNFDSRLFAIALPDLRGAQSLSFDQG 60 Query: 61 AWLSTAAIGSQIFVAPAVAWLATVFGLRRVLGIPSLVYAVVSLTIPFVRDYTMLITLSIA 120 AWLSTAA SQIF+APAVAW+AT FGLRRVLG+PSL YAVVSL IP V Y +++ LS+ Sbjct: 61 AWLSTAATASQIFIAPAVAWMATAFGLRRVLGLPSLAYAVVSLLIPLVHSYELMMALSVV 120 Query: 121 HGMLLGTFVPATLMIILRNLPIRWWLPAIAMYSIRVGFALDSSSSLVGFYVEHLGWQWLY 180 HG+LLG FVPATL+II RNLP+RWWLPAI++Y+IRVGF+L+ S+VGFYV+ +GWQWLY Sbjct: 121 HGLLLGIFVPATLLIIFRNLPLRWWLPAISIYAIRVGFSLNFGISVVGFYVDQIGWQWLY 180 Query: 181 WQGVVIAPLMGLMVYLGTPNEPVNRDLLHHADWGGMLLLGAGVSMVYAGLDQGNRLDWLS 240 WQ +IAPL+GL VYLGTP EPVN L+ ADWGGMLLLG+G+++++AGLDQGNRLDWL Sbjct: 181 WQDALIAPLLGLFVYLGTPAEPVNAPLVKQADWGGMLLLGSGMALIFAGLDQGNRLDWLG 240 Query: 241 SGTVMALLIGGGLLIIAFMINEMVARRPWAHFNVLFSRNIGLSLIVILLYTLTSLSNSSL 300 SGTV+A L G L+ F +NE V +PWAH NVLFSRNIG +L++ILL++LTSLSNS L Sbjct: 241 SGTVVACLGCGAALVAGFFVNERVVAQPWAHANVLFSRNIGFALLIILLFSLTSLSNSLL 300 Query: 301 VPNFLGTIGALRPEQSGVLLFTYGALPMFVLVPISILLLRHFDPRIVVVLGFSAFAAANL 360 P+FL ++ LRPEQSG L Y LPM + VP+S+ L+R D R+V++ G +AF AA L Sbjct: 301 APDFLASVAGLRPEQSGQLFLVYAVLPMLLWVPLSVWLIRRIDVRLVLIAGLAAFCAAGL 360 Query: 361 WGTQLSHVWAREDFVGIVLLTSIGQAFTLLPIIIMALSNSDPSRATAFTAYIQIMRLGGA 420 GT+L+H WA DFV +VLL S GQAFTLLPI+I+ LSNSDP RATAF AYIQ+ RLGGA Sbjct: 361 LGTRLTHAWALGDFVPMVLLQSFGQAFTLLPIVIITLSNSDPQRATAFAAYIQVARLGGA 420 Query: 421 EIGVALMVTWLRVREQIHSNYLGQHVQNGDIDVVNLLKRLAGEFSGHGIGTATGRAVGTL 480 E+ V+LM TWLRVREQ +SN LG HV GD V +L L F G G G A RA+ TL Sbjct: 421 ELSVSLMTTWLRVREQSYSNLLGLHVAKGDPLVSGVLSDLTRHFDGAGSGEAQSRAITTL 480 Query: 481 AALVQREANTLAYIDGFWLCFWLAILALVLVAFITRAPQGPLSP 524 A +VQREANTL++IDGFWL W + AL+ A I AP GP +P Sbjct: 481 AQIVQREANTLSFIDGFWLAAWFGVAALLCAACIRAAPPGPFTP 524