BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0108.p (311 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236393.1| hypothetical protein BBta_0190 [Bradyrhizobi... 431 e-119 ref|YP_001202382.1| putative signal peptide [Bradyrhizobium sp. ... 420 e-115 emb|CAB60667.1| hypothetical protein [Bradyrhizobium japonicum] 398 e-109 ref|NP_767318.1| hypothetical protein bll0679 [Bradyrhizobium ja... 398 e-109 ref|NP_945685.1| hypothetical protein RPA0332 [Rhodopseudomonas ... 381 e-104 >ref|YP_001236393.1| hypothetical protein BBta_0190 [Bradyrhizobium sp. BTAi1] gb|ABQ32487.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 311 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 213/308 (69%), Positives = 244/308 (79%), Gaps = 2/308 (0%) Query: 5 RLLVAVALLLAATCRGFAADVVFPPGAHVGMKPLVGLNRAKSFIGFETEDQGVKVLIADL 64 RLL A + L+ AAD +FPPG +G+ PLVGL +AK+F GFETEDQ VKVL+ +L Sbjct: 5 RLLAAAVVSLSLLGPVSAADAIFPPGVRIGLAPLVGLTKAKTFPGFETEDQSVKVLLTEL 64 Query: 65 PADAYNEVVSAFKANPAGSGNIKPESLETPAGLAYYTVESARDGTTNVRRYSMILPGPTF 124 PA AY EV +AF ANP G+GNIKPES+ET AG AYYTVE+ RDG VRRYSMILPG F Sbjct: 65 PAAAYGEVKNAFTANPGGTGNIKPESIETAAGTAYYTVENGRDGAAAVRRYSMILPGTGF 124 Query: 125 SGYVAVQVPENASKIYTDDAVRQMFATAQIRNEVPVDEQLGMMPFKVTELSSFKNVRMLA 184 SGYVAVQVPE ASKIYTDDAVRQMFATA +R +VPVDEQL MPFKVTELS FK VR L Sbjct: 125 SGYVAVQVPETASKIYTDDAVRQMFATAVVRKDVPVDEQLSTMPFKVTELSGFKTVRTLG 184 Query: 185 PGAALLMADGD-DRGLETKPFMLLGIIGSAPATPDDRGRFAQQIATTIPGVRDGRITMSE 243 PGA LL+ADG+ D+G+E PF+++G++ A DRGR AQQ ATTIPGVR+ ITMSE Sbjct: 185 PGA-LLLADGEEDKGIEAAPFVVIGLVAGATPEAGDRGRIAQQAATTIPGVREAHITMSE 243 Query: 244 PIRIDGQPGFETRIDAVSGKDNTPVTIVQWLRFGAQTSMRIIGSSPRTDWEKAFPRFRAV 303 PIRIDG P +ETR+DAVSGKDNTPVT+VQWLRFG ++RIIGS+PR W AFPRFRAV Sbjct: 244 PIRIDGLPAYETRVDAVSGKDNTPVTVVQWLRFGGPNTLRIIGSAPRDQWSTAFPRFRAV 303 Query: 304 RDGIQPRG 311 RDGIQPRG Sbjct: 304 RDGIQPRG 311 >ref|YP_001202382.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL74132.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 311 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 209/310 (67%), Positives = 242/310 (78%), Gaps = 3/310 (0%) Query: 4 FRLLVAVALLLAATCR-GFAADVVFPPGAHVGMKPLVGLNRAKSFIGFETEDQGVKVLIA 62 F LVAVAL A AAD ++P G +G+ PLVGL +AK+F GFETED VKVL+ Sbjct: 3 FSRLVAVALASIALLEPALAADAIYPSGVRIGLAPLVGLAKAKNFPGFETEDGSVKVLLT 62 Query: 63 DLPADAYNEVVSAFKANPAGSGNIKPESLETPAGLAYYTVESARDGTTNVRRYSMILPGP 122 +LPA AY EV +AF ANP G+G IKPES+ET AG AYYTVE+ RDG T VRRYSMILPG Sbjct: 63 ELPAKAYGEVKTAFTANPGGTGGIKPESIETSAGTAYYTVENGRDGATPVRRYSMILPGA 122 Query: 123 TFSGYVAVQVPENASKIYTDDAVRQMFATAQIRNEVPVDEQLGMMPFKVTELSSFKNVRM 182 FSGYVAVQVPE A KIYTDDAVRQMFA+A +R EVPVDEQL MPF VTELS FK VR Sbjct: 123 GFSGYVAVQVPETAGKIYTDDAVRQMFASAVVRKEVPVDEQLSTMPFNVTELSGFKTVRT 182 Query: 183 LAPGAALLMADGDD-RGLETKPFMLLGIIGSAPATPDDRGRFAQQIATTIPGVRDGRITM 241 L PGA L++ADGD+ +G E PF+++G++ A DRGR AQQ ATTIPGVR+ RITM Sbjct: 183 LGPGA-LILADGDEEKGFEAAPFVVIGLVAGAAPEAGDRGRVAQQAATTIPGVREARITM 241 Query: 242 SEPIRIDGQPGFETRIDAVSGKDNTPVTIVQWLRFGAQTSMRIIGSSPRTDWEKAFPRFR 301 SEPIRIDG P +ETR++AVSGKDNTPVT+VQWLRFG +++RIIGS+PR W AFPRFR Sbjct: 242 SEPIRIDGLPAYETRVEAVSGKDNTPVTVVQWLRFGGPSTLRIIGSAPRDQWSAAFPRFR 301 Query: 302 AVRDGIQPRG 311 AVRDGIQP+G Sbjct: 302 AVRDGIQPKG 311 >emb|CAB60667.1| hypothetical protein [Bradyrhizobium japonicum] Length = 313 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/293 (64%), Positives = 237/293 (80%), Gaps = 2/293 (0%) Query: 21 FAADVVFPPGAHVGMKPLVGLNRAKSFIGFETEDQGVKVLIADLPADAYNEVVSAFKANP 80 FAAD VFPPG +GM PLVGL+ AK+F GFE+ED VKVLI +LP AY EVVSAF +NP Sbjct: 21 FAADAVFPPGLRLGMVPLVGLSTAKTFPGFESEDGTVKVLITELPPAAYGEVVSAFNSNP 80 Query: 81 AGSGNIKPESLETPAGLAYYTVESARDGTTNVRRYSMILPGPTFSGYVAVQVPENASKIY 140 AG+G +K + +ETPAGLAY+T ES + G T V+RYSMI+PG FSGYVAVQ+PENA+KIY Sbjct: 81 AGTGGVKQDKIETPAGLAYFTTESGKAGETAVKRYSMIVPGAGFSGYVAVQIPENATKIY 140 Query: 141 TDDAVRQMFATAQIRNEVPVDEQLGMMPFKVTELSSFKNVRMLAPGAALLMADGDDR-GL 199 TD+AVRQMFA+ R +V +EQ+ +MPFK+T+L+ FK++R LAPG+++++ADG++ G Sbjct: 141 TDEAVRQMFASTVTRKQVSAEEQIALMPFKITDLADFKDIRTLAPGSSIILADGNESTGY 200 Query: 200 ETKPFMLLGIIGSAPATPDDRGRFAQQIATTIPGVRDGRITMSEPIRIDGQPGFETRIDA 259 E+KPFM+LG+IG+ P DDR RFAQ+ A IPGVR+ R+TMSEPIRI+GQ GFETRID Sbjct: 201 ESKPFMILGLIGATPQAADDRARFAQEAALQIPGVRESRVTMSEPIRINGQQGFETRIDG 260 Query: 260 VSGKDNTPVTIVQWLRFGA-QTSMRIIGSSPRTDWEKAFPRFRAVRDGIQPRG 311 VSGKD TPVT+VQW+RF + S+RII S+PR W+ AF RFRAVRDGIQP+G Sbjct: 261 VSGKDKTPVTVVQWIRFSSGGASLRIIASAPRDQWQAAFTRFRAVRDGIQPKG 313 >ref|NP_767318.1| hypothetical protein bll0679 [Bradyrhizobium japonicum USDA 110] dbj|BAC45943.1| bll0679 [Bradyrhizobium japonicum USDA 110] Length = 315 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/293 (64%), Positives = 237/293 (80%), Gaps = 2/293 (0%) Query: 21 FAADVVFPPGAHVGMKPLVGLNRAKSFIGFETEDQGVKVLIADLPADAYNEVVSAFKANP 80 FAAD VFPPG +GM PLVGL+ AK+F GFE+ED VKVLI +LP AY EVVSAF +NP Sbjct: 23 FAADAVFPPGLRLGMVPLVGLSTAKTFPGFESEDGTVKVLITELPPAAYGEVVSAFNSNP 82 Query: 81 AGSGNIKPESLETPAGLAYYTVESARDGTTNVRRYSMILPGPTFSGYVAVQVPENASKIY 140 AG+G +K + +ETPAGLAY+T ES + G T V+RYSMI+PG FSGYVAVQ+PENA+KIY Sbjct: 83 AGTGGVKQDKIETPAGLAYFTTESGKAGETAVKRYSMIVPGAGFSGYVAVQIPENATKIY 142 Query: 141 TDDAVRQMFATAQIRNEVPVDEQLGMMPFKVTELSSFKNVRMLAPGAALLMADGDDR-GL 199 TD+AVRQMFA+ R +V +EQ+ +MPFK+T+L+ FK++R LAPG+++++ADG++ G Sbjct: 143 TDEAVRQMFASTVTRKQVSAEEQIALMPFKITDLADFKDIRTLAPGSSIILADGNESTGY 202 Query: 200 ETKPFMLLGIIGSAPATPDDRGRFAQQIATTIPGVRDGRITMSEPIRIDGQPGFETRIDA 259 E+KPFM+LG+IG+ P DDR RFAQ+ A IPGVR+ R+TMSEPIRI+GQ GFETRID Sbjct: 203 ESKPFMILGLIGATPQAADDRARFAQEAALQIPGVRESRVTMSEPIRINGQQGFETRIDG 262 Query: 260 VSGKDNTPVTIVQWLRFGA-QTSMRIIGSSPRTDWEKAFPRFRAVRDGIQPRG 311 VSGKD TPVT+VQW+RF + S+RII S+PR W+ AF RFRAVRDGIQP+G Sbjct: 263 VSGKDKTPVTVVQWIRFSSGGASLRIIASAPRDQWQAAFTRFRAVRDGIQPKG 315 >ref|NP_945685.1| hypothetical protein RPA0332 [Rhodopseudomonas palustris CGA009] emb|CAE25776.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 313 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/307 (59%), Positives = 233/307 (75%), Gaps = 3/307 (0%) Query: 7 LVAVALLLAATCRGFAADVVFPPGAHVGMKPLVGLNRAKSFIGFETEDQGVKVLIADLPA 66 L A+ALL A AAD V+P G VG+ P+ GLN++ +F+GFE+ DQGVKVL+++LP Sbjct: 7 LFAIALLSATATNAVAADAVYPRGIRVGIVPMPGLNQSTAFLGFESGDQGVKVLVSELPG 66 Query: 67 DAYNEVVSAFKANPAGS-GNIKPESLETPAGLAYYTVESARDGTTNVRRYSMILPGPT-F 124 A++++ +AFKA P GS GN+KPE +ET AG Y+T E A G VRRYS+I+PG F Sbjct: 67 PAFDQIDAAFKAAPEGSLGNVKPEKIETAAGNGYFTAEDAVVGPDKVRRYSLIVPGSKLF 126 Query: 125 SGYVAVQVPENASKIYTDDAVRQMFATAQIRNEVPVDEQLGMMPFKVTELSSFKNVRMLA 184 SGYVAVQVP +K Y+D+A+++M ++ +R +VPVDEQ+ MPFK+ EL FK VR LA Sbjct: 127 SGYVAVQVPATEAKTYSDEAIKKMLSSVSVRQQVPVDEQVAQMPFKIRELGDFKTVRTLA 186 Query: 185 PGAALLMADGDDRGLETKPFMLLGIIGSAPATPDDRGRFAQQIATTIPGVRDGRITMSEP 244 PGAALL+ DG++ +ET PFM+LG+IGS P DDR RFAQQ A IPGVR+ +ITMSEP Sbjct: 187 PGAALLLTDGNEEAVETGPFMVLGLIGSVPEKTDDRARFAQQAAEAIPGVRESKITMSEP 246 Query: 245 IRIDGQPGFETRIDAVSGKDNTPVTIVQWLRFG-AQTSMRIIGSSPRTDWEKAFPRFRAV 303 +RIDG PGFETR+ VSGK+NTPVT+VQWLRFG A +MR+IGSSP+ WE AFPRFR V Sbjct: 247 MRIDGAPGFETRVTGVSGKNNTPVTVVQWLRFGSANVAMRVIGSSPKDQWETAFPRFRKV 306 Query: 304 RDGIQPR 310 RDG+QPR Sbjct: 307 RDGLQPR 313