BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0100.p (385 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_575510.1| coproporphyrinogen III oxidase [Nitrobacter ham... 680 0.0 ref|ZP_08627830.1| coproporphyrinogen III oxidase-like protein [... 679 0.0 ref|ZP_01045052.1| coproporphyrinogen III oxidase [Nitrobacter s... 674 0.0 ref|YP_316811.1| coproporphyrinogen III oxidase [Nitrobacter win... 673 0.0 ref|YP_001236387.1| coproporphyrinogen III oxidase [Bradyrhizobi... 672 0.0 >ref|YP_575510.1| coproporphyrinogen III oxidase [Nitrobacter hamburgensis X14] gb|ABE61050.1| Putative oxygen-independent coproporphyrinogen III oxidase [Nitrobacter hamburgensis X14] Length = 386 Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/378 (85%), Positives = 355/378 (93%) Query: 8 AFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQVSSIFLG 67 AFGVYVHWPFCLSKCPYCDFNSHVRHAP+DE+RFVRAF REIETTAAR PGR+VSSIFLG Sbjct: 9 AFGVYVHWPFCLSKCPYCDFNSHVRHAPIDEERFVRAFTREIETTAARSPGREVSSIFLG 68 Query: 68 GGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV 127 GGTPSLMQPQTVGA+L+AIGK+W+V+ + E+TLEANPTSVEATRFRGYRAAGVNRVSLGV Sbjct: 69 GGTPSLMQPQTVGAILEAIGKNWRVADNAEITLEANPTSVEATRFRGYRAAGVNRVSLGV 128 Query: 128 QALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADELKQAISE 187 QAL DASLKA+GRLHTAREALDAVAIARS FDRYSFDLIYARPDQTP MW++EL++AISE Sbjct: 129 QALDDASLKALGRLHTAREALDAVAIARSVFDRYSFDLIYARPDQTPAMWSEELQRAISE 188 Query: 188 AAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPAYEISNHA 247 AAEHLSLYQLTIE+GTPFFGLHAAGKL+TPDEA +RALYDVTQE+CAR GLPAYEISNHA Sbjct: 189 AAEHLSLYQLTIEQGTPFFGLHAAGKLKTPDEAISRALYDVTQEICARHGLPAYEISNHA 248 Query: 248 RAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEERGHGVVS 307 R GAEC+HNLVYWRG+EYAGIGPGAHGRLDIDG RHA ATE+RPEAWL+ VE G+G+V+ Sbjct: 249 RPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGDRHAIATEKRPEAWLMRVEAIGNGIVA 308 Query: 308 DDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAVDADGRLR 367 DD LNSEERADEFLLMGLRL EGIDP+RYA LSGR LDP RIA+LREEGAIA+ DGRLR Sbjct: 309 DDLLNSEERADEFLLMGLRLREGIDPQRYAALSGRLLDPRRIAILREEGAIAISPDGRLR 368 Query: 368 VTKSGFPVLDAVVADLAA 385 VT+ GFPVLDAVVADLAA Sbjct: 369 VTQDGFPVLDAVVADLAA 386 >ref|ZP_08627830.1| coproporphyrinogen III oxidase-like protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09359.1| coproporphyrinogen III oxidase-like protein [Bradyrhizobiaceae bacterium SG-6C] Length = 385 Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/385 (84%), Positives = 351/385 (91%) Query: 1 LSHADREAFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQ 60 +S A +EAFGVYVHWPFCLSKCPYCDFNSHVRHAP+DE RF RAF REIETTAAR PGR+ Sbjct: 1 MSTAAKEAFGVYVHWPFCLSKCPYCDFNSHVRHAPIDEFRFARAFEREIETTAARTPGRE 60 Query: 61 VSSIFLGGGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGV 120 V+SIFLGGGTPSLMQPQTVGA+L+AI KHW V+RDVEVTLEANPTSVEATRF+GYR+AGV Sbjct: 61 VTSIFLGGGTPSLMQPQTVGAILNAIAKHWSVARDVEVTLEANPTSVEATRFKGYRSAGV 120 Query: 121 NRVSLGVQALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADE 180 NRVSLGVQAL DASLKA+GRLH+AREALDAVAIARSAFDRYSFDLIYARPDQTPRMW DE Sbjct: 121 NRVSLGVQALDDASLKALGRLHSAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWEDE 180 Query: 181 LKQAISEAAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPA 240 LK A++EAAEHLSLYQLTIE TPFFGLHA GKL+ PDEA ARALYDVTQEVCA+ GLP+ Sbjct: 181 LKLAMAEAAEHLSLYQLTIEPETPFFGLHATGKLKIPDEAVARALYDVTQEVCAKLGLPS 240 Query: 241 YEISNHARAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEE 300 YEISNHAR GAECKHNLVYWRG+EYAGIGPGAHGRLDIDG+RHA ATE+RPE WL+ VE Sbjct: 241 YEISNHARPGAECKHNLVYWRGQEYAGIGPGAHGRLDIDGIRHAVATEKRPETWLMRVEA 300 Query: 301 RGHGVVSDDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAV 360 +GHGV+ DD LNSEERADE+LLMGLRLAEGIDP RY LSGR LDP RI +LR+EGAI V Sbjct: 301 QGHGVIGDDLLNSEERADEYLLMGLRLAEGIDPARYKALSGRALDPRRIEILRDEGAITV 360 Query: 361 DADGRLRVTKSGFPVLDAVVADLAA 385 D DGR+RVT GFPVLDAVVADLAA Sbjct: 361 DPDGRVRVTMQGFPVLDAVVADLAA 385 >ref|ZP_01045052.1| coproporphyrinogen III oxidase [Nitrobacter sp. Nb-311A] gb|EAQ37057.1| coproporphyrinogen III oxidase [Nitrobacter sp. Nb-311A] Length = 386 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/378 (85%), Positives = 346/378 (91%) Query: 8 AFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQVSSIFLG 67 AFGVYVHWPFCLSKCPYCDFNSHVRHAP+DE+RF RAFAREIETTAAR GR VSSIFLG Sbjct: 9 AFGVYVHWPFCLSKCPYCDFNSHVRHAPIDEERFARAFAREIETTAARSRGRTVSSIFLG 68 Query: 68 GGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV 127 GGTPSLMQPQTVGA+LDAIGKHW V DVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV Sbjct: 69 GGTPSLMQPQTVGAILDAIGKHWGVGGDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV 128 Query: 128 QALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADELKQAISE 187 QAL D SLKA+GRLHTAREALDAVAIARS F RYSFDLIYARPDQTP MWA+EL++AISE Sbjct: 129 QALDDPSLKALGRLHTAREALDAVAIARSVFGRYSFDLIYARPDQTPVMWAEELQRAISE 188 Query: 188 AAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPAYEISNHA 247 A EHLSLYQLTIEEGTPFFGLH AGKL+TP+EA ARALYDVTQE+C R GLPAYE+SNHA Sbjct: 189 AVEHLSLYQLTIEEGTPFFGLHTAGKLKTPNEAIARALYDVTQEICTRHGLPAYEVSNHA 248 Query: 248 RAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEERGHGVVS 307 R GAEC+HNLVYWRGEEYAGIGPGAHGRLDIDG+RHA ATE+RPEAWL+ VE G GVV+ Sbjct: 249 RPGAECRHNLVYWRGEEYAGIGPGAHGRLDIDGIRHAIATEKRPEAWLMRVEATGDGVVA 308 Query: 308 DDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAVDADGRLR 367 DD LNSEERADEFLLMGLRL EGIDP+RYA LSGR LDP RIA+LR+EGAI + DGRLR Sbjct: 309 DDLLNSEERADEFLLMGLRLREGIDPQRYAALSGRSLDPRRIAILRDEGAITISTDGRLR 368 Query: 368 VTKSGFPVLDAVVADLAA 385 VT+ GFPVLDAVVADLAA Sbjct: 369 VTQDGFPVLDAVVADLAA 386 >ref|YP_316811.1| coproporphyrinogen III oxidase [Nitrobacter winogradskyi Nb-255] gb|ABA03459.1| putative oxygen-independent coproporphyrinogen III oxidase [Nitrobacter winogradskyi Nb-255] Length = 386 Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/378 (85%), Positives = 348/378 (92%) Query: 8 AFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQVSSIFLG 67 AFGVY+HWPFCLSKCPYCDFNSHVRHAP+DE+RF RAFAREIETTAAR GR VSSIFLG Sbjct: 9 AFGVYIHWPFCLSKCPYCDFNSHVRHAPIDEERFTRAFAREIETTAARSRGRTVSSIFLG 68 Query: 68 GGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV 127 GGTPSLM+PQTVGA+LDAIGKHW V+ DVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV Sbjct: 69 GGTPSLMRPQTVGAILDAIGKHWSVADDVEVTLEANPTSVEATRFRGYRAAGVNRVSLGV 128 Query: 128 QALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADELKQAISE 187 QAL D+SLKA+GRLHTAREA DAVAIARS FDRYSFDLIYARPDQTP MWA EL++AISE Sbjct: 129 QALDDSSLKALGRLHTAREAQDAVAIARSVFDRYSFDLIYARPDQTPAMWAGELQRAISE 188 Query: 188 AAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPAYEISNHA 247 AAEHLSLYQLTIE GTPFF LHAAGKL+TPDEA AR LYDVTQ+VCAR GLPAYEISNHA Sbjct: 189 AAEHLSLYQLTIEAGTPFFDLHAAGKLKTPDEAMARDLYDVTQDVCARHGLPAYEISNHA 248 Query: 248 RAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEERGHGVVS 307 R GAEC+HNLVYWRG+EYAGIGPGAHGRLDIDGVRHA ATE+RPEAWL+ VE G+G+V+ Sbjct: 249 RPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGVRHAIATEKRPEAWLMRVEANGNGIVA 308 Query: 308 DDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAVDADGRLR 367 DD LNSEERADEFLLMGLRL EGIDP+RYA LSGR LDP RIA+LR+EGAI + DGRLR Sbjct: 309 DDPLNSEERADEFLLMGLRLREGIDPRRYAALSGRSLDPRRIAILRDEGAIMISTDGRLR 368 Query: 368 VTKSGFPVLDAVVADLAA 385 VT+ GFPVLDAVVADLAA Sbjct: 369 VTQDGFPVLDAVVADLAA 386 >ref|YP_001236387.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. BTAi1] gb|ABQ32481.1| putative oxygen-independent coproporphyrinogen III oxidase (yggW) [Bradyrhizobium sp. BTAi1] Length = 385 Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/385 (83%), Positives = 346/385 (89%) Query: 1 LSHADREAFGVYVHWPFCLSKCPYCDFNSHVRHAPVDEDRFVRAFAREIETTAARVPGRQ 60 ++ A+ EAFGVYVHWPFCLSKCPYCDFNSHVRH +D+DRF RAFAREIETTAAR+ R Sbjct: 1 MTSAENEAFGVYVHWPFCLSKCPYCDFNSHVRHTAIDQDRFARAFAREIETTAARIGART 60 Query: 61 VSSIFLGGGTPSLMQPQTVGAVLDAIGKHWQVSRDVEVTLEANPTSVEATRFRGYRAAGV 120 VSSIFLGGGTPSLMQPQTVGA+LDAIGKHW V+ DVEV+LEANPTSVEATRF GYR AGV Sbjct: 61 VSSIFLGGGTPSLMQPQTVGAILDAIGKHWHVASDVEVSLEANPTSVEATRFAGYRTAGV 120 Query: 121 NRVSLGVQALYDASLKAVGRLHTAREALDAVAIARSAFDRYSFDLIYARPDQTPRMWADE 180 NRVSLGVQA+ DASLK +GRLHTA EA+ AVAIAR AF RYSFDLIYARPDQTP MW +E Sbjct: 121 NRVSLGVQAMDDASLKMLGRLHTAEEAMKAVAIARQAFTRYSFDLIYARPDQTPAMWTEE 180 Query: 181 LKQAISEAAEHLSLYQLTIEEGTPFFGLHAAGKLQTPDEATARALYDVTQEVCAREGLPA 240 L +AI EAAEHLSLYQLTIEEGTPFFGLHAAGKL+TPDE AR LYDVTQEVCAR GLPA Sbjct: 181 LTRAIGEAAEHLSLYQLTIEEGTPFFGLHAAGKLKTPDEGLARTLYDVTQEVCARHGLPA 240 Query: 241 YEISNHARAGAECKHNLVYWRGEEYAGIGPGAHGRLDIDGVRHATATERRPEAWLLNVEE 300 YEISNHAR GAEC+HNLVYWRG+EYAGIGPGAHGRLDIDG+RHA AT++RPEAWL+ VE Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGIRHAIATDKRPEAWLMRVES 300 Query: 301 RGHGVVSDDSLNSEERADEFLLMGLRLAEGIDPKRYAKLSGRQLDPHRIAMLREEGAIAV 360 GHGV++DD LN EERADEFLLMGLRLAEGIDPKRYA +SGR LDP RIA+LREEGAI V Sbjct: 301 NGHGVMTDDELNREERADEFLLMGLRLAEGIDPKRYAAISGRPLDPRRIALLREEGAIIV 360 Query: 361 DADGRLRVTKSGFPVLDAVVADLAA 385 D DGRLRVT+ GFPVLDAVVADLAA Sbjct: 361 DGDGRLRVTQDGFPVLDAVVADLAA 385