BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0095.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771007.1| hypothetical protein bll4367 [Bradyrhizobium ja... 578 e-163 ref|ZP_08627836.1| hypothetical protein CSIRO_0903 [Bradyrhizobi... 523 e-146 ref|YP_001416264.1| beta-lactamase domain-containing protein [Xa... 412 e-113 ref|YP_003754949.1| beta-lactamase [Hyphomicrobium denitrificans... 408 e-112 ref|YP_004716783.1| putative beta-lactamase protein [Sinorhizobi... 395 e-108 >ref|NP_771007.1| hypothetical protein bll4367 [Bradyrhizobium japonicum USDA 110] dbj|BAC49632.1| bll4367 [Bradyrhizobium japonicum USDA 110] Length = 323 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 288/323 (89%), Positives = 305/323 (94%) Query: 1 MTLNVSRRSLLALGAGLGASTLLGGTAQARAPKLGTQTPYWHRFMLGEAEVTVVSDGPLP 60 MTL+VSRRSLLALGAGLGAS +LG +A ARAPKLGTQTPYWHRF+LG+AEVTVVSDGPLP Sbjct: 1 MTLDVSRRSLLALGAGLGASAMLGSSAMARAPKLGTQTPYWHRFILGDAEVTVVSDGPLP 60 Query: 61 LGDPSGTFTGVPKEEVKKMLSDNFLSPDNVVLEQNSPIVNTGDKLILFDTGMGTSKAFGP 120 LGDPSGTFTGV KEEVKKML+DNFLSPDNVVLEQNSPIVNTGDKLILFDTGMG+SK FGP Sbjct: 61 LGDPSGTFTGVSKEEVKKMLADNFLSPDNVVLEQNSPIVNTGDKLILFDTGMGSSKMFGP 120 Query: 121 TTGRQQKSMKEAGIKPEDIDAVVLSHAHIDHIGGIVGADDKPLFPNAQYYIAQSDLEFWT 180 TTGRQQKSM EAGIKPEDIDAVV SHAHIDHIGGIV A++KPLFPNAQ YI+Q+D +FWT Sbjct: 121 TTGRQQKSMMEAGIKPEDIDAVVCSHAHIDHIGGIVDANNKPLFPNAQIYISQTDFDFWT 180 Query: 181 DEGKMGSPLKDFIVHARKNLLPVRDRIVFFKDGQEFLPGVTAIAAPGHTVGHTIFMVSSG 240 DEGKMGSP KDF+VHARKNLLPVRDRIVFF+DGQEFLPGV AI+APGHTVGHTIFMVSS Sbjct: 181 DEGKMGSPAKDFVVHARKNLLPVRDRIVFFRDGQEFLPGVQAISAPGHTVGHTIFMVSSA 240 Query: 241 GKSFAFLGDLSHHAVLLLERPRMEFSYDTDPKQAANSRVKLLEMLAANKTAVMSYHFAWP 300 GKSFAFLGDLSHH+VLLLERPRMEFSYDTDPKQAA SRVKLL MLAANKT VMSYHFAWP Sbjct: 241 GKSFAFLGDLSHHSVLLLERPRMEFSYDTDPKQAAESRVKLLTMLAANKTPVMSYHFAWP 300 Query: 301 GYGHVAKVGEGFHYYPEPMQMNL 323 GYGHVAK G+GFHYYPEPMQM L Sbjct: 301 GYGHVAKAGDGFHYYPEPMQMTL 323 >ref|ZP_08627836.1| hypothetical protein CSIRO_0903 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09365.1| hypothetical protein CSIRO_0903 [Bradyrhizobiaceae bacterium SG-6C] Length = 326 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 260/326 (79%), Positives = 289/326 (88%), Gaps = 3/326 (0%) Query: 1 MTLNVSRRSLLALGAGLGAS---TLLGGTAQARAPKLGTQTPYWHRFMLGEAEVTVVSDG 57 MTL+VSRRSLLALGAGLGA T +GG A A+APKLGTQ PY+HRF LG AEVTVVSDG Sbjct: 1 MTLDVSRRSLLALGAGLGAGLAATTIGGGALAKAPKLGTQAPYFHRFTLGSAEVTVVSDG 60 Query: 58 PLPLGDPSGTFTGVPKEEVKKMLSDNFLSPDNVVLEQNSPIVNTGDKLILFDTGMGTSKA 117 PLPLGDPSGTF GVPKE+VKKMLSDNFLS NVVLEQN+PIVN GD+++LFDTGMGTSK Sbjct: 61 PLPLGDPSGTFIGVPKEDVKKMLSDNFLSTSNVVLEQNAPIVNFGDRIVLFDTGMGTSKL 120 Query: 118 FGPTTGRQQKSMKEAGIKPEDIDAVVLSHAHIDHIGGIVGADDKPLFPNAQYYIAQSDLE 177 FGPTTGR QKS+ EAG+KPED+DA+V SHAHIDHIGGIVGAD KPLFPNAQ YI+Q+DLE Sbjct: 121 FGPTTGRLQKSITEAGLKPEDVDAIVCSHAHIDHIGGIVGADGKPLFPNAQVYISQTDLE 180 Query: 178 FWTDEGKMGSPLKDFIVHARKNLLPVRDRIVFFKDGQEFLPGVTAIAAPGHTVGHTIFMV 237 FWTDE KM PLKDFIVHARKNL+PVRDR+VFFKDGQEFLPG+TA+AAPGHT GH +FM+ Sbjct: 181 FWTDEKKMDGPLKDFIVHARKNLMPVRDRVVFFKDGQEFLPGITALAAPGHTFGHHMFMI 240 Query: 238 SSGGKSFAFLGDLSHHAVLLLERPRMEFSYDTDPKQAANSRVKLLEMLAANKTAVMSYHF 297 S GKSFAFLGDL+HH +LLLERPRMEF+YD+DPK AA +RVK+L+MLAANKTAVMSYHF Sbjct: 241 QSDGKSFAFLGDLTHHQILLLERPRMEFAYDSDPKMAAATRVKMLDMLAANKTAVMSYHF 300 Query: 298 AWPGYGHVAKVGEGFHYYPEPMQMNL 323 WPGYGHV K G+GF Y EPM MNL Sbjct: 301 PWPGYGHVVKAGDGFRYIAEPMIMNL 326 >ref|YP_001416264.1| beta-lactamase domain-containing protein [Xanthobacter autotrophicus Py2] gb|ABS66607.1| beta-lactamase domain protein [Xanthobacter autotrophicus Py2] Length = 329 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/323 (60%), Positives = 245/323 (75%), Gaps = 2/323 (0%) Query: 3 LNVSRRSLLALGAGLGASTLLGGTAQA--RAPKLGTQTPYWHRFMLGEAEVTVVSDGPLP 60 L RR+LL +GA L G A A +AP +G PY++RF G+ E+TVVSDG LP Sbjct: 7 LITRRRALLGGALSVGALALGPGLAPAFAKAPLVGQPAPYFYRFKFGDGEITVVSDGTLP 66 Query: 61 LGDPSGTFTGVPKEEVKKMLSDNFLSPDNVVLEQNSPIVNTGDKLILFDTGMGTSKAFGP 120 LGDP FTG+ +E+ + L+ NFL N VLEQN ++NTG+KLI+FDTGMGTSK FGP Sbjct: 67 LGDPHANFTGLSAQEMDRQLTSNFLPLSNAVLEQNILVLNTGEKLIVFDTGMGTSKLFGP 126 Query: 121 TTGRQQKSMKEAGIKPEDIDAVVLSHAHIDHIGGIVGADDKPLFPNAQYYIAQSDLEFWT 180 TTG+ S+K+AGI P+D+DAVV+SHAHIDH GG + D FPNAQYYI+Q+D ++WT Sbjct: 127 TTGKLMASIKQAGIDPKDVDAVVMSHAHIDHCGGCMAEDGTRNFPNAQYYISQADYDYWT 186 Query: 181 DEGKMGSPLKDFIVHARKNLLPVRDRIVFFKDGQEFLPGVTAIAAPGHTVGHTIFMVSSG 240 DE +G LK F+ ARKNL+P RDR+VFFKDG+EFLPG+ AI+APGHTVGHT+FM+SSG Sbjct: 187 DEKTVGPNLKAFLEQARKNLVPNRDRMVFFKDGEEFLPGIQAISAPGHTVGHTVFMISSG 246 Query: 241 GKSFAFLGDLSHHAVLLLERPRMEFSYDTDPKQAANSRVKLLEMLAANKTAVMSYHFAWP 300 GK ++GDL+HH VLLLE+P EF YDTDPKQ+A SRVK+L MLAAN+ +++YHFAWP Sbjct: 247 GKQLCYIGDLAHHPVLLLEQPLTEFMYDTDPKQSAQSRVKVLSMLAANRIPLIAYHFAWP 306 Query: 301 GYGHVAKVGEGFHYYPEPMQMNL 323 G+GHVA G+GF Y+P PM M + Sbjct: 307 GFGHVAAQGQGFRYFPAPMVMEM 329 >ref|YP_003754949.1| beta-lactamase [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ22628.1| beta-lactamase domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 327 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 189/302 (62%), Positives = 234/302 (77%), Gaps = 1/302 (0%) Query: 23 LGGTAQARAPKLGTQTPYWHRFMLGEAEVTVVSDGPLPLGDPSGTFTGVPKEEVKKMLSD 82 G A A++PKLG Q PYW+RF +G+AEVTVVSDG LGDPS +F GVPKEEV++ L+D Sbjct: 26 FNGPAFAKSPKLGVQAPYWYRFNMGDAEVTVVSDGWQMLGDPSNSFLGVPKEEVRRELTD 85 Query: 83 NFLSPDNVVLEQNSPIVNTGDKLILFDTGMGTSKAFGPTTGRQQKSMKEAGIKPEDIDAV 142 NF+SP ++ +E NS +VN K +LFDTG+G+SK FGP G K++ EAGIK EDIDAV Sbjct: 86 NFMSPSDMNIELNSFVVNNNGKTVLFDTGLGSSKMFGPKGGLLAKNLAEAGIKREDIDAV 145 Query: 143 VLSHAHIDHIGGIVGADDKPLFPNAQYYIAQSDLEFWTDEGKMGSPLKD-FIVHARKNLL 201 V+SH HIDHIGGIV L+PNAQ YI+Q+D +WTDE M SP K F++HARKNLL Sbjct: 146 VISHGHIDHIGGIVDESGALLYPNAQVYISQADFSYWTDEKHMDSPWKKAFVIHARKNLL 205 Query: 202 PVRDRIVFFKDGQEFLPGVTAIAAPGHTVGHTIFMVSSGGKSFAFLGDLSHHAVLLLERP 261 PVRDR++FFKD QEFLPG+TA++APGHT+GHT+F V S G+SF F+GD+SHH+VLL+ P Sbjct: 206 PVRDRMIFFKDDQEFLPGITAVSAPGHTLGHTMFNVQSNGQSFFFVGDVSHHSVLLIANP 265 Query: 262 RMEFSYDTDPKQAANSRVKLLEMLAANKTAVMSYHFAWPGYGHVAKVGEGFHYYPEPMQM 321 RMEF YDTD KQA +R+K+L LA N+ +++YHFAWPGYGH K GEGF Y P PM M Sbjct: 266 RMEFLYDTDSKQAVKTRLKMLSFLAENRIPILAYHFAWPGYGHFVKQGEGFRYLPAPMNM 325 Query: 322 NL 323 NL Sbjct: 326 NL 327 >ref|YP_004716783.1| putative beta-lactamase protein [Sinorhizobium fredii GR64] gb|AEI89646.1| putative beta-lactamase protein [Sinorhizobium fredii GR64] Length = 332 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/325 (57%), Positives = 239/325 (73%), Gaps = 4/325 (1%) Query: 3 LNVSRRSLL-ALGAGLGASTLLGGTAQARA---PKLGTQTPYWHRFMLGEAEVTVVSDGP 58 + RR+LL A GA L + L + A A P G Q P ++RF +G+A+VT+VSDGP Sbjct: 6 FEIDRRNLLLAGGAALSGAVLGANSVAAHAGASPVSGAQAPDFYRFAIGDAQVTIVSDGP 65 Query: 59 LPLGDPSGTFTGVPKEEVKKMLSDNFLSPDNVVLEQNSPIVNTGDKLILFDTGMGTSKAF 118 LPLGDP+ +F GVP +E++ ML+ +FL D VVL QN+P+VN G KLILFDTGMG+ K F Sbjct: 66 LPLGDPTQSFLGVPADEIRSMLNHSFLPTDEVVLAQNAPVVNIGGKLILFDTGMGSLKQF 125 Query: 119 GPTTGRQQKSMKEAGIKPEDIDAVVLSHAHIDHIGGIVGADDKPLFPNAQYYIAQSDLEF 178 GPTTGR + + A I EDIDAVV SHAH DH+GGI G D KP FPNAQ YI+Q+D +F Sbjct: 126 GPTTGRLKSCLAAANIALEDIDAVVCSHAHWDHVGGIWGDDGKPTFPNAQVYISQTDYDF 185 Query: 179 WTDEGKMGSPLKDFIVHARKNLLPVRDRIVFFKDGQEFLPGVTAIAAPGHTVGHTIFMVS 238 WTDE K+G L + A NL PVRDR+VFF+D QEFLPG+ AI+APGHT+GH+ FM+ Sbjct: 186 WTDEKKLGGDLNGLVKAAIHNLKPVRDRMVFFQDEQEFLPGIHAISAPGHTLGHSCFMIE 245 Query: 239 SGGKSFAFLGDLSHHAVLLLERPRMEFSYDTDPKQAANSRVKLLEMLAANKTAVMSYHFA 298 S GK+ + GDL+HH VLL E+P MEF++DTDPK +A SRV++L+MLA+N+ MSYHF Sbjct: 246 SAGKTMCYGGDLTHHPVLLFEKPLMEFAFDTDPKLSAQSRVRILKMLASNRIPFMSYHFP 305 Query: 299 WPGYGHVAKVGEGFHYYPEPMQMNL 323 WPGYGHV GEGF Y+PEP+ ++L Sbjct: 306 WPGYGHVGIAGEGFEYFPEPLHLSL 330