BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0192.0090.p         (135 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767300.1| hypothetical protein bll0660 [Bradyrhizobium ja...   124   5e-27
ref|ZP_08627852.1| hypothetical protein CSIRO_0919 [Bradyrhizobi...   113   1e-23
ref|YP_484036.1| hypothetical protein RPB_0414 [Rhodopseudomonas...   112   2e-23
ref|YP_567545.1| hypothetical protein RPD_0406 [Rhodopseudomonas...   112   2e-23
ref|YP_530210.1| hypothetical protein RPC_0316 [Rhodopseudomonas...   111   3e-23

>ref|NP_767300.1| hypothetical protein bll0660 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45925.1| bll0660 [Bradyrhizobium japonicum USDA 110]
          Length = 155

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/117 (54%), Positives = 86/117 (73%), Gaps = 1/117 (0%)

Query: 1   MQIASIPWLAQLHVSFTDDPSQATVRVQIADSADAADFTVIDDIDDAEAGACERSAAAQL 60
           +++ S+ W A +HV+FTDDP++ATVRVQI D AD ADF V+DD   AE  +C+ +   +L
Sbjct: 39  VELTSLFWTAGIHVAFTDDPTRATVRVQITDDADGADFAVVDDGLGAEPDSCQANPQTRL 98

Query: 61  IGISSDASATGPVIYLTHDDGPSDYRVFVQSKTFSVRDAAALIVSARGGHRRLEAAS 117
           I I++     GPVIYL+  DGP+DYR++V+SKTFS R+AAALIV A  GHR  +AAS
Sbjct: 99  ITIAAQPVDGGPVIYLS-TDGPADYRIYVRSKTFSQREAAALIVGAHDGHRPFQAAS 154


>ref|ZP_08627852.1| hypothetical protein CSIRO_0919 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09381.1| hypothetical protein CSIRO_0919 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 143

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/115 (54%), Positives = 78/115 (67%), Gaps = 5/115 (4%)

Query: 1   MQIASIPWLAQLHVSFTDDPSQATVRVQIADSADAADFTVIDDIDDAEAGACERSAAAQL 60
           MQIA+ PW   LHVSFTDDP  ATVRVQ+ D+AD ADFTVID    AEA +C  +     
Sbjct: 27  MQIATAPWQNPLHVSFTDDPEMATVRVQVVDAADMADFTVIDGTMTAEADSCTVNRDTSF 86

Query: 61  IGIS-SDASATGPVIYLTHDDGPSDYRVFVQSKTFSVRDAAALIVSARGGHRRLE 114
           + IS    + T PVIYL+ D G +DYR+FVQS+ FS +DAAAL+V   G  RR++
Sbjct: 87  VSISDRHLTDTDPVIYLSRDPG-ADYRIFVQSRAFSTKDAAALVV---GAGRRVQ 137


>ref|YP_484036.1| hypothetical protein RPB_0414 [Rhodopseudomonas palustris HaA2]
 gb|ABD05125.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 161

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 1/118 (0%)

Query: 1   MQIASIPWLAQLHVSFTDDPSQATVRVQIADSADAADFTVIDDIDDAEAGACERSAAAQL 60
           +QIA     AQ+HV FTDDP++ATVRVQI DS DAADF V DD+   E G C  +  ++L
Sbjct: 39  VQIAPALGRAQIHVGFTDDPARATVRVQIVDSPDAADFAVTDDVVTDEPGGCVSAPESRL 98

Query: 61  IGISSDASATGPVIYLTH-DDGPSDYRVFVQSKTFSVRDAAALIVSARGGHRRLEAAS 117
           + I+++ +AT  VIYLTH DDG  DYR+FV++ +F+ R+AAAL+V++   H  +  AS
Sbjct: 99  VAITTNPAATDAVIYLTHDDDGRIDYRIFVRANSFTAREAAALLVASSSRHAPIATAS 156


>ref|YP_567545.1| hypothetical protein RPD_0406 [Rhodopseudomonas palustris BisB5]
 gb|ABE37644.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 161

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 78/107 (72%), Gaps = 1/107 (0%)

Query: 1   MQIASIPWLAQLHVSFTDDPSQATVRVQIADSADAADFTVIDDIDDAEAGACERSAAAQL 60
           +QIA   WLA L V FT+DP++AT+RVQI DS DAADF V DD  + ++GAC  +   +L
Sbjct: 39  VQIAPASWLAHLRVGFTEDPARATIRVQIVDSPDAADFAVTDDAGNTDSGACALTPETRL 98

Query: 61  IGISSDASATGPVIYLTHD-DGPSDYRVFVQSKTFSVRDAAALIVSA 106
           +GI++  ++  P+IYLT+D  G +DYR+FV S +F++R AAAL+V A
Sbjct: 99  VGIAAHPASDEPLIYLTYDAGGGADYRIFVSSNSFTLRQAAALLVGA 145


>ref|YP_530210.1| hypothetical protein RPC_0316 [Rhodopseudomonas palustris BisB18]
 gb|ABD85891.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 161

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 77/115 (66%), Gaps = 1/115 (0%)

Query: 2   QIASIPWLAQLHVSFTDDPSQATVRVQIADSADAADFTVIDDIDDAEAGACERSAAAQLI 61
           Q+A  PW A LHVSFTDD S+A+VRVQI D+ + ADFTV+DDID AE   CER  + +LI
Sbjct: 43  QLAPTPWQAGLHVSFTDDASRASVRVQIVDAPEQADFTVVDDIDAAEPAGCERGESPRLI 102

Query: 62  GISSDASATGPVIYLTHDDGPSDYRVFVQSKTFSVRDAAALIVSARGGHRRLEAA 116
            I+   S   PVI+L+ D   +DYR+FV+S   S R+AAALIV A      L AA
Sbjct: 103 AITPTPSGADPVIHLSRDRD-ADYRIFVRSSRVSEREAAALIVGANAAPAHLVAA 156