BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0192.0088.p         (119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_530209.1| multi-sensor hybrid histidine kinase [Rhodopseu...   197   5e-49
ref|NP_767299.1| two-component hybrid sensor and regulator [Brad...   195   2e-48
ref|YP_001236342.1| PAS/PAC sensor hybrid histidine kinase [Brad...   187   6e-46
ref|YP_001202434.1| sensor histidine kinase [Bradyrhizobium sp. ...   185   2e-45
ref|ZP_08627853.1| two-component hybrid sensor and regulator [Br...   180   8e-44

>ref|YP_530209.1| multi-sensor hybrid histidine kinase [Rhodopseudomonas palustris
           BisB18]
 gb|ABD85890.1| multi-sensor hybrid histidine kinase [Rhodopseudomonas palustris
           BisB18]
          Length = 757

 Score =  197 bits (500), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 107/119 (89%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           LMRSLL++LGH  VIT++GEQA+ESWL+A SAG  YDLVLMDIQMP L+GIETTK+IRAH
Sbjct: 639 LMRSLLSKLGHRAVITSDGEQALESWLAADSAGAAYDLVLMDIQMPHLDGIETTKRIRAH 698

Query: 61  EAAHSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEALAGLAAARHIAA 119
           EA H  RRTPILALTANTL+EDRYACFEAGMDGFL+KPLDR+KL EALA + A+R++AA
Sbjct: 699 EAGHRARRTPILALTANTLVEDRYACFEAGMDGFLVKPLDRDKLTEALASMQASRYLAA 757


>ref|NP_767299.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
           USDA 110]
 dbj|BAC45924.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
           USDA 110]
          Length = 743

 Score =  195 bits (495), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 107/119 (89%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           LMRSLLT+LGH VVI  +GE A+ESWL+A+SAGTPYDLVLMDIQMP+L+GIE TK+IRAH
Sbjct: 625 LMRSLLTKLGHRVVIAVHGEAALESWLAASSAGTPYDLVLMDIQMPQLDGIEATKRIRAH 684

Query: 61  EAAHSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEALAGLAAARHIAA 119
           EAA     TPILALTANTL+EDRYACFEAGM+GFLIKPLDR+KL+EALAGLAA+R +A 
Sbjct: 685 EAATGGHHTPILALTANTLVEDRYACFEAGMNGFLIKPLDRDKLDEALAGLAASRQLAG 743


>ref|YP_001236342.1| PAS/PAC sensor hybrid histidine kinase [Bradyrhizobium sp. BTAi1]
 gb|ABQ32436.1| PAS/PAC sensor hybrid histidine kinase [Bradyrhizobium sp. BTAi1]
          Length = 745

 Score =  187 bits (474), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 86/119 (72%), Positives = 105/119 (88%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           LMRSLLT+LGH+  I  +GE A++SWL+A +AGTPYDL+LMD+QMPRL+GI  T++IRAH
Sbjct: 627 LMRSLLTKLGHHADIAVHGEAALDSWLAARAAGTPYDLILMDVQMPRLDGIAATRRIRAH 686

Query: 61  EAAHSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEALAGLAAARHIAA 119
           EA+   RRTPILALTAN L+EDRYACFEAGMDGFL+KP+DR+KL+EALA LAAAR +AA
Sbjct: 687 EASEPGRRTPILALTANALVEDRYACFEAGMDGFLVKPIDRDKLDEALANLAAARQVAA 745


>ref|YP_001202434.1| sensor histidine kinase [Bradyrhizobium sp. ORS 278]
 emb|CAL74184.1| Putative Sensor histidine kinase with PAS and Response regulator
           receiver domains [Bradyrhizobium sp. ORS 278]
          Length = 754

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/119 (73%), Positives = 104/119 (87%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           LMRSLLT+LGH+  I  +GE A++SWL+A SAGTPYDL+LMD+QMPRL+GI   K+IRA 
Sbjct: 636 LMRSLLTKLGHHADIAVHGEAALDSWLAARSAGTPYDLILMDVQMPRLDGIAAAKRIRAL 695

Query: 61  EAAHSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEALAGLAAARHIAA 119
           EA  + RRTPILALTANTL+EDRYACFEAGMDGFL+KP+DR+KL+EALA LAAAR +AA
Sbjct: 696 EATEAGRRTPILALTANTLVEDRYACFEAGMDGFLVKPIDRDKLDEALANLAAARQVAA 754


>ref|ZP_08627853.1| two-component hybrid sensor and regulator [Bradyrhizobiaceae
           bacterium SG-6C]
 gb|EGP09382.1| two-component hybrid sensor and regulator [Bradyrhizobiaceae
           bacterium SG-6C]
          Length = 757

 Score =  180 bits (456), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 97/108 (89%)

Query: 1   LMRSLLTRLGHNVVITTNGEQAMESWLSATSAGTPYDLVLMDIQMPRLNGIETTKQIRAH 60
           L+RSLL +LGH  VITT+GEQA+ESW++A SAGTPYD+VLMDIQMP+L+GI  TK+IRAH
Sbjct: 631 LIRSLLIKLGHAPVITTDGEQALESWIAADSAGTPYDVVLMDIQMPKLDGISATKRIRAH 690

Query: 61  EAAHSVRRTPILALTANTLMEDRYACFEAGMDGFLIKPLDREKLEEAL 108
           EA  S RRT ILALTANTL++DRYACFEAGMDGFLIKPLDR+KL EAL
Sbjct: 691 EAGRSPRRTTILALTANTLVDDRYACFEAGMDGFLIKPLDRDKLSEAL 738