BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0047.p (146 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767259.1| hypothetical protein bll0619 [Bradyrhizobium ja... 228 2e-58 ref|YP_779334.1| cyclic nucleotide-binding protein [Rhodopseudom... 207 4e-52 ref|YP_484002.1| cyclic nucleotide-binding domain-containing pro... 206 1e-51 ref|YP_004106719.1| putative Crp/Fnr family transcriptional regu... 202 1e-50 ref|YP_567580.1| cyclic nucleotide-binding protein [Rhodopseudom... 198 3e-49 >ref|NP_767259.1| hypothetical protein bll0619 [Bradyrhizobium japonicum USDA 110] dbj|BAC45884.1| bll0619 [Bradyrhizobium japonicum USDA 110] Length = 147 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/147 (80%), Positives = 131/147 (89%), Gaps = 1/147 (0%) Query: 1 MSIDDDVALLERVPTMRLLGESSLRMLAIGSEQRDFNAGDVLFKAGDAADAGYVVQRGTF 60 MSIDDDVALLERVPT+RLLG++SLRMLAIGSEQRDF GD+LF GD ADAG+VVQRG F Sbjct: 1 MSIDDDVALLERVPTLRLLGDASLRMLAIGSEQRDFVRGDILFNLGDDADAGFVVQRGAF 60 Query: 61 RVEEG-GAEIIAGPGALIGELALIVAMKRPSTATALERGSVIRVARSLFQRVLESDPAAA 119 RVE+G GAE+ GPGALIGELAL+V MKRPS+A ALE SVIRVARSLFQRVLESDPAAA Sbjct: 61 RVEDGAGAEMTVGPGALIGELALVVPMKRPSSAIALEHSSVIRVARSLFQRVLESDPAAA 120 Query: 120 RRLRDELALRTSQLASDILMAGGKLST 146 RLRDE A+R+SQ+ASDILMAG KL+T Sbjct: 121 VRLRDEFAVRSSQIASDILMAGAKLTT 147 >ref|YP_779334.1| cyclic nucleotide-binding protein [Rhodopseudomonas palustris BisA53] gb|ABJ04354.1| cyclic nucleotide-binding protein [Rhodopseudomonas palustris BisA53] Length = 148 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 108/148 (72%), Positives = 124/148 (83%), Gaps = 2/148 (1%) Query: 1 MSIDDDVALLERVPTMRLLGESSLRMLAIGSEQRDFNAGDVLFKAGDAADAGYVVQRGTF 60 MSI+DDVALLERVPT+RLLGE+SLRMLAIGSEQ+ F GDVLF AGD ADAGYVVQRG+F Sbjct: 1 MSIEDDVALLERVPTLRLLGETSLRMLAIGSEQQAFGRGDVLFTAGDPADAGYVVQRGSF 60 Query: 61 RV--EEGGAEIIAGPGALIGELALIVAMKRPSTATALERGSVIRVARSLFQRVLESDPAA 118 RV +E G IIA PGALIGELAL++ M RPSTA A E + IR+ RSLFQRVLE+DPAA Sbjct: 61 RVSDDEDGHTIIATPGALIGELALLMPMPRPSTAVAQEYSAAIRIGRSLFQRVLEADPAA 120 Query: 119 ARRLRDELALRTSQLASDILMAGGKLST 146 ARRLRDE A RTS++ ++ILMAG KL + Sbjct: 121 ARRLRDEFASRTSKITTEILMAGAKLGS 148 >ref|YP_484002.1| cyclic nucleotide-binding domain-containing protein [Rhodopseudomonas palustris HaA2] gb|ABD05091.1| cyclic nucleotide-binding protein [Rhodopseudomonas palustris HaA2] Length = 148 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 109/148 (73%), Positives = 126/148 (85%), Gaps = 3/148 (2%) Query: 1 MSIDDDVALLERVPTMRLLGESSLRMLAIGSEQRDFNAGDVLFKAGDAADAGYVVQRGTF 60 MSI+DDVALLERVPT+RLLG++SLRMLAIGS+QRDF GDVLF AGDA+DAGYVVQ G F Sbjct: 1 MSIEDDVALLERVPTLRLLGDTSLRMLAIGSDQRDFARGDVLFNAGDASDAGYVVQSGAF 60 Query: 61 RV--EEGGA-EIIAGPGALIGELALIVAMKRPSTATALERGSVIRVARSLFQRVLESDPA 117 +V E+GG E+IA PG LIGELAL++ M RPS+A ALE SVIR+ARSLFQRVLESDPA Sbjct: 61 QVTSEDGGPHELIARPGDLIGELALVLPMPRPSSAVALEYSSVIRIARSLFQRVLESDPA 120 Query: 118 AARRLRDELALRTSQLASDILMAGGKLS 145 AA+RLRDE A RT+ +A DIL AG KL+ Sbjct: 121 AAKRLRDEFAARTTTIARDILRAGAKLT 148 >ref|YP_004106719.1| putative Crp/Fnr family transcriptional regulator [Rhodopseudomonas palustris DX-1] gb|ADU41986.1| putative transcriptional regulator, Crp/Fnr family [Rhodopseudomonas palustris DX-1] Length = 149 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 106/149 (71%), Positives = 124/149 (83%), Gaps = 3/149 (2%) Query: 1 MSIDDDVALLERVPTMRLLGESSLRMLAIGSEQRDFNAGDVLFKAGDAADAGYVVQRGTF 60 MSI+DDVALL RVPT+RLLGE +LRMLAIGSEQRDF GDV+F AG+AADAGYVVQRG F Sbjct: 1 MSIEDDVALLARVPTLRLLGEQALRMLAIGSEQRDFARGDVMFNAGEAADAGYVVQRGAF 60 Query: 61 RV--EEGG-AEIIAGPGALIGELALIVAMKRPSTATALERGSVIRVARSLFQRVLESDPA 117 ++ E+GG E++A PG LIGELALI+ M RP+TA ALE S IR+ARSLFQRVLESDP Sbjct: 61 QITMEDGGLHEMVARPGDLIGELALIMPMPRPTTAVALEYSSAIRIARSLFQRVLESDPG 120 Query: 118 AARRLRDELALRTSQLASDILMAGGKLST 146 AA RLRDE A RT+Q+ASDI+ G KL++ Sbjct: 121 AALRLRDEFAARTTQVASDIVTVGSKLTS 149 >ref|YP_567580.1| cyclic nucleotide-binding protein [Rhodopseudomonas palustris BisB5] gb|ABE37679.1| cyclic nucleotide-binding protein [Rhodopseudomonas palustris BisB5] Length = 148 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 102/148 (68%), Positives = 121/148 (81%), Gaps = 3/148 (2%) Query: 1 MSIDDDVALLERVPTMRLLGESSLRMLAIGSEQRDFNAGDVLFKAGDAADAGYVVQRGTF 60 MSI+DDVALLERVPT+RLLG++SLRMLAIGS+QR+F GDVLF AGDA+DAGYVVQ G+F Sbjct: 1 MSIEDDVALLERVPTLRLLGDTSLRMLAIGSDQREFARGDVLFSAGDASDAGYVVQTGSF 60 Query: 61 RVEE---GGAEIIAGPGALIGELALIVAMKRPSTATALERGSVIRVARSLFQRVLESDPA 117 +V G E+IA PG LIGELAL++ M RPS+A A+E SV+R+ARSLFQRVLESDP Sbjct: 61 QVTSADGGPHEMIARPGDLIGELALVLPMPRPSSAVAMEYSSVVRIARSLFQRVLESDPV 120 Query: 118 AARRLRDELALRTSQLASDILMAGGKLS 145 AAR LRDE A RT+ +A DI AG KL+ Sbjct: 121 AARNLRDEFAARTTMIAKDITRAGAKLT 148