BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0039.p (482 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767253.1| ammonium transporter [Bradyrhizobium japonicum ... 858 0.0 ref|YP_567587.1| ammonium transporter [Rhodopseudomonas palustri... 817 0.0 ref|YP_530166.1| ammonium transporter [Rhodopseudomonas palustri... 811 0.0 ref|ZP_08627893.1| ammonium transporter [Bradyrhizobiaceae bacte... 801 0.0 ref|NP_945628.1| ammonium transporter [Rhodopseudomonas palustri... 785 0.0 >ref|NP_767253.1| ammonium transporter [Bradyrhizobium japonicum USDA 110] dbj|BAC45878.1| ammonium transporter [Bradyrhizobium japonicum USDA 110] Length = 510 Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/482 (95%), Positives = 474/482 (98%) Query: 1 MTFKRPYGAGLAALAVGLFAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL 60 MTFKRPYGAGLAALAVGLFAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL Sbjct: 29 MTFKRPYGAGLAALAVGLFAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL 88 Query: 61 VRSKNMLSVLAQVFYTVCLVTVLWALYGYSLAFTGGSDFIGGFSKAFLMGVTPDSKAATF 120 VRSKNMLSVL QVFYTVC+VTV+WA+YGYSLAFTGGSDFIGGFSKAF+MGVT DSKAATF Sbjct: 89 VRSKNMLSVLMQVFYTVCVVTVIWAVYGYSLAFTGGSDFIGGFSKAFMMGVTTDSKAATF 148 Query: 121 SVDANISELVYMCFQMTFAAITPALIVGAFAERMKFAAIALFIPLWVTLIYFPIAHMVWY 180 SVDANISEL+YMCFQMTFAAITPALIVGAFAERMKF+AIALFIPLWVTLIYFPIAHMVWY Sbjct: 149 SVDANISELIYMCFQMTFAAITPALIVGAFAERMKFSAIALFIPLWVTLIYFPIAHMVWY 208 Query: 181 WPGPDAIQDAAKALAAAADGAAKTAAQAKLDEINADAGWIFKKGAIDFAGGTVVHINAGI 240 WPGPDAIQDAAKALAAA D AAKTAAQAKLDEINADAGWIFKKGAIDFAGGTVVHINAGI Sbjct: 209 WPGPDAIQDAAKALAAATDAAAKTAAQAKLDEINADAGWIFKKGAIDFAGGTVVHINAGI 268 Query: 241 AGLVGALLIGKRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEANGGAALAMTN 300 AGLVGALLIGKRTGYGKELMAPHSLTM+MIGASLLWVGWFGFNAGSNLEANGGAALAMTN Sbjct: 269 AGLVGALLIGKRTGYGKELMAPHSLTMSMIGASLLWVGWFGFNAGSNLEANGGAALAMTN 328 Query: 301 SFVATAAAALSWMFAEWIIKGHPSLLGALSGAVAGLVAVTPAAGFAGPMGAIVLGLVVGV 360 SFVATAAAALSWMFAEWI+KGHPS+LG +SGAVAGLVAVTPAAGF+G MGAIVLGLVVGV Sbjct: 329 SFVATAAAALSWMFAEWIVKGHPSVLGVISGAVAGLVAVTPAAGFSGVMGAIVLGLVVGV 388 Query: 361 VCLFFCTVVKNALGYDDSLDVFGVHCVGGIVGALGTGILVNPALGGAGIIDYTAIPPKVA 420 VCLFFCTVVKNA+GYDDSLDVFGVHC+GGIVGALGTGILVNPALGGAGIIDYTAIPPKVA Sbjct: 389 VCLFFCTVVKNAIGYDDSLDVFGVHCIGGIVGALGTGILVNPALGGAGIIDYTAIPPKVA 448 Query: 421 DYDFAAQMISQVWGVGTTLVWSGIGSAILYKIVDVIVGLRANVETEREGLDITEHTERAY 480 DYDFAAQM+SQ WGV TTLVWSGIGSAILYK+VDVIVGLRANVE+EREGLDITEHTERAY Sbjct: 449 DYDFAAQMVSQFWGVCTTLVWSGIGSAILYKVVDVIVGLRANVESEREGLDITEHTERAY 508 Query: 481 NM 482 NM Sbjct: 509 NM 510 >ref|YP_567587.1| ammonium transporter [Rhodopseudomonas palustris BisB5] gb|ABE37686.1| ammonium transporter [Rhodopseudomonas palustris BisB5] Length = 480 Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/482 (85%), Positives = 446/482 (92%), Gaps = 2/482 (0%) Query: 1 MTFKRPYGAGLAALAVGLFAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL 60 MTFKRPYGAGLA LA GLFAATAAYAEPTVNKGDNAWM+TST+LVLLMTIPGLALFYGGL Sbjct: 1 MTFKRPYGAGLAVLAAGLFAATAAYAEPTVNKGDNAWMMTSTILVLLMTIPGLALFYGGL 60 Query: 61 VRSKNMLSVLAQVFYTVCLVTVLWALYGYSLAFTGGSDFIGGFSKAFLMGVTPDSKAATF 120 VRSKNMLSVLAQVFYTVC+ +++WA+YGYSLAFTGGSDFIGGFSKAFL G+TPDSKAATF Sbjct: 61 VRSKNMLSVLAQVFYTVCVGSIIWAVYGYSLAFTGGSDFIGGFSKAFLAGITPDSKAATF 120 Query: 121 SVDANISELVYMCFQMTFAAITPALIVGAFAERMKFAAIALFIPLWVTLIYFPIAHMVWY 180 SVDANISEL+Y+CFQMTF +TPALIVGAFAER +FAA+ALFIPLW+TLIY P+AHMVWY Sbjct: 121 SVDANISELIYVCFQMTFCTLTPALIVGAFAERTRFAAVALFIPLWITLIYLPMAHMVWY 180 Query: 181 WPGPDAIQDAAKALAAAADGAAKTAAQAKLDEINADAGWIFKKGAIDFAGGTVVHINAGI 240 W GPDAI DA KALAAA D A K AAQAKLDE+NADAG++FKKGA+DFAGGTVVHINAGI Sbjct: 181 WAGPDAISDAVKALAAATDEATKAAAQAKLDEVNADAGFLFKKGALDFAGGTVVHINAGI 240 Query: 241 AGLVGALLIGKRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEANGGAALAMTN 300 AGLVGALL+G+RTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGS LEA+GGA LAM N Sbjct: 241 AGLVGALLVGRRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSALEASGGAGLAMAN 300 Query: 301 SFVATAAAALSWMFAEWIIKGHPSLLGALSGAVAGLVAVTPAAGFAGPMGAIVLGLVVGV 360 +FVATAAAALSWMFAEWI KGHPSLLGALSGAVAGLVAVTPAAG++GPMGAIVLGLV GV Sbjct: 301 TFVATAAAALSWMFAEWIFKGHPSLLGALSGAVAGLVAVTPAAGYSGPMGAIVLGLVAGV 360 Query: 361 VCLFFCTVVKNALGYDDSLDVFGVHCVGGIVGALGTGILVNPALGGAGIIDYTAIPPKVA 420 VCLFFCTV+KNAL YDDSLDVFGVH VGGIVGALGTGI+VNPALGG G+ DYT KVA Sbjct: 361 VCLFFCTVIKNALKYDDSLDVFGVHAVGGIVGALGTGIVVNPALGGTGVYDYTL--GKVA 418 Query: 421 DYDFAAQMISQVWGVGTTLVWSGIGSAILYKIVDVIVGLRANVETEREGLDITEHTERAY 480 +YD QMISQ WGVGTTL+ SGIGSAILYK+VDVIVGLRA VE EREGLD+ EHTERAY Sbjct: 419 EYDLVNQMISQSWGVGTTLLLSGIGSAILYKVVDVIVGLRAPVEVEREGLDLVEHTERAY 478 Query: 481 NM 482 NM Sbjct: 479 NM 480 >ref|YP_530166.1| ammonium transporter [Rhodopseudomonas palustris BisB18] gb|ABD85847.1| ammonium transporter [Rhodopseudomonas palustris BisB18] Length = 480 Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/482 (87%), Positives = 452/482 (93%), Gaps = 2/482 (0%) Query: 1 MTFKRPYGAGLAALAVGLFAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL 60 MTFKRPY AGLAALAVG+FAATAAYAEPTVNKGDNAW++TSTVLVLLMTIPGLALFYGG+ Sbjct: 1 MTFKRPYSAGLAALAVGMFAATAAYAEPTVNKGDNAWLMTSTVLVLLMTIPGLALFYGGM 60 Query: 61 VRSKNMLSVLAQVFYTVCLVTVLWALYGYSLAFTGGSDFIGGFSKAFLMGVTPDSKAATF 120 VRSKNMLSVL QVFYTVC+ +LWALYGYSLAFTGGSDFIGGFSKAFL GVT DSKAATF Sbjct: 61 VRSKNMLSVLMQVFYTVCIAIILWALYGYSLAFTGGSDFIGGFSKAFLAGVTTDSKAATF 120 Query: 121 SVDANISELVYMCFQMTFAAITPALIVGAFAERMKFAAIALFIPLWVTLIYFPIAHMVWY 180 SVDAN+SELVY+CFQMTFAAITPALIVGAFAER +FAA+ALFIPLW+TLIYFPIAHMVWY Sbjct: 121 SVDANVSELVYVCFQMTFAAITPALIVGAFAERTRFAAVALFIPLWLTLIYFPIAHMVWY 180 Query: 181 WPGPDAIQDAAKALAAAADGAAKTAAQAKLDEINADAGWIFKKGAIDFAGGTVVHINAGI 240 W GPDAI AAKALAAA D A+K AQA LD +NADAGW+FKKGAIDFAGGTVVHINAGI Sbjct: 181 WAGPDAIDAAAKALAAATDDASKATAQAALDAVNADAGWVFKKGAIDFAGGTVVHINAGI 240 Query: 241 AGLVGALLIGKRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEANGGAALAMTN 300 AGL+GA+LIGKRTGYGKELM+PHSLTM+MIGASLLWVGWFGFNAGSNLEA GGA LAMTN Sbjct: 241 AGLMGAILIGKRTGYGKELMSPHSLTMSMIGASLLWVGWFGFNAGSNLEATGGAGLAMTN 300 Query: 301 SFVATAAAALSWMFAEWIIKGHPSLLGALSGAVAGLVAVTPAAGFAGPMGAIVLGLVVGV 360 SFVATAAAALSWMFAEW+IKGHPS+LGA+SGAVAGLVAVTPAAGF+GPMGAIVLGLVVGV Sbjct: 301 SFVATAAAALSWMFAEWMIKGHPSVLGAISGAVAGLVAVTPAAGFSGPMGAIVLGLVVGV 360 Query: 361 VCLFFCTVVKNALGYDDSLDVFGVHCVGGIVGALGTGILVNPALGGAGIIDYTAIPPKVA 420 VCLFFCTVVKNALGYDDSLDVFGVHC+GGIVGALGTGILVNPALGG GI+DY A K+A Sbjct: 361 VCLFFCTVVKNALGYDDSLDVFGVHCIGGIVGALGTGILVNPALGGTGIMDYAA--GKIA 418 Query: 421 DYDFAAQMISQVWGVGTTLVWSGIGSAILYKIVDVIVGLRANVETEREGLDITEHTERAY 480 DYD AQ+ +Q WGVGTTLVWSGIGSAILYK+VDVIVGLRA VE EREGLD+ EHTERAY Sbjct: 419 DYDMVAQLTAQSWGVGTTLVWSGIGSAILYKVVDVIVGLRATVEVEREGLDVVEHTERAY 478 Query: 481 NM 482 NM Sbjct: 479 NM 480 >ref|ZP_08627893.1| ammonium transporter [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09422.1| ammonium transporter [Bradyrhizobiaceae bacterium SG-6C] Length = 480 Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/482 (87%), Positives = 455/482 (94%), Gaps = 2/482 (0%) Query: 1 MTFKRPYGAGLAALAVGLFAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL 60 MTFKRP AGLA LAVGLFA TAAYA PTVNKGDNAWM+T+TVLVLLMTIPGLALFYGGL Sbjct: 1 MTFKRPTSAGLATLAVGLFATTAAYAAPTVNKGDNAWMMTATVLVLLMTIPGLALFYGGL 60 Query: 61 VRSKNMLSVLAQVFYTVCLVTVLWALYGYSLAFTGGSDFIGGFSKAFLMGVTPDSKAATF 120 VRSKNMLSVL QVFYTVC+V V+WALYGYSLAFTGGSDFIGGFSKAF+ G+T DS AATF Sbjct: 61 VRSKNMLSVLMQVFYTVCIVCVIWALYGYSLAFTGGSDFIGGFSKAFMSGITTDSMAATF 120 Query: 121 SVDANISELVYMCFQMTFAAITPALIVGAFAERMKFAAIALFIPLWVTLIYFPIAHMVWY 180 SVDANISE++Y CFQMTFAAITPALIVGAFAERMKF+AIALFIPLWVTLIYFP+AHMVWY Sbjct: 121 SVDANISEMIYFCFQMTFAAITPALIVGAFAERMKFSAIALFIPLWVTLIYFPMAHMVWY 180 Query: 181 WPGPDAIQDAAKALAAAADGAAKTAAQAKLDEINADAGWIFKKGAIDFAGGTVVHINAGI 240 W GPDAI DAAKA+AAAADGAAKTAAQAKLDE+ ADAG++FKKGA+DFAGGTVVHINAGI Sbjct: 181 WAGPDAITDAAKAVAAAADGAAKTAAQAKLDEVMADAGFLFKKGALDFAGGTVVHINAGI 240 Query: 241 AGLVGALLIGKRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEANGGAALAMTN 300 AGLVGALLIGKRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEA+GGAALAMTN Sbjct: 241 AGLVGALLIGKRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEASGGAALAMTN 300 Query: 301 SFVATAAAALSWMFAEWIIKGHPSLLGALSGAVAGLVAVTPAAGFAGPMGAIVLGLVVGV 360 SF+ATAAAALSWMFAEW+IKGHPS+LGALSGAVAGLVAVTPA GF+GPMGAI+LGLVVGV Sbjct: 301 SFLATAAAALSWMFAEWMIKGHPSVLGALSGAVAGLVAVTPACGFSGPMGAIILGLVVGV 360 Query: 361 VCLFFCTVVKNALGYDDSLDVFGVHCVGGIVGALGTGILVNPALGGAGIIDYTAIPPKVA 420 VCLFFCTVVKNALGYDDSLDVFGVHC+GGIVGALGTGILVNPALGG G++DY + KV Sbjct: 361 VCLFFCTVVKNALGYDDSLDVFGVHCIGGIVGALGTGILVNPALGGTGVLDY--VTGKVG 418 Query: 421 DYDFAAQMISQVWGVGTTLVWSGIGSAILYKIVDVIVGLRANVETEREGLDITEHTERAY 480 DYD QMISQ WGVGTTL++SGIGSAI+YKIVDVIVGLR +V+ EREGLDIT+HTERAY Sbjct: 419 DYDMVTQMISQSWGVGTTLLFSGIGSAIIYKIVDVIVGLRVSVDAEREGLDITDHTERAY 478 Query: 481 NM 482 NM Sbjct: 479 NM 480 >ref|NP_945628.1| ammonium transporter [Rhodopseudomonas palustris CGA009] ref|YP_001989314.1| ammonium transporter [Rhodopseudomonas palustris TIE-1] emb|CAE25719.1| putative ammonium transporter AmtB [Rhodopseudomonas palustris CGA009] gb|ACE98838.1| ammonium transporter [Rhodopseudomonas palustris TIE-1] Length = 480 Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/482 (88%), Positives = 452/482 (93%), Gaps = 2/482 (0%) Query: 1 MTFKRPYGAGLAALAVGLFAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL 60 MTFKRPYGAGLA LA G+FAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL Sbjct: 1 MTFKRPYGAGLAVLAAGMFAATAAYAEPTVNKGDNAWMLTSTVLVLLMTIPGLALFYGGL 60 Query: 61 VRSKNMLSVLAQVFYTVCLVTVLWALYGYSLAFTGGSDFIGGFSKAFLMGVTPDSKAATF 120 VRSKNMLSVLAQVFYTVC+ ++WALYGYSLAFTGGSDFIGGFSKAFL GVT DSKAATF Sbjct: 61 VRSKNMLSVLAQVFYTVCIACIIWALYGYSLAFTGGSDFIGGFSKAFLAGVTTDSKAATF 120 Query: 121 SVDANISELVYMCFQMTFAAITPALIVGAFAERMKFAAIALFIPLWVTLIYFPIAHMVWY 180 SVDANISELVY+CFQMTF AITPALIVGAFAER +FAA+ALFIPLW+TLIY P+AHMVWY Sbjct: 121 SVDANISELVYVCFQMTFCAITPALIVGAFAERTRFAAVALFIPLWITLIYLPMAHMVWY 180 Query: 181 WPGPDAIQDAAKALAAAADGAAKTAAQAKLDEINADAGWIFKKGAIDFAGGTVVHINAGI 240 W GPDAI DAAKALAAAAD AAKTAAQAKLDE+NAD+G++FKKGAIDFAGGTVVHINAGI Sbjct: 181 WAGPDAINDAAKALAAAADEAAKTAAQAKLDEVNADSGFLFKKGAIDFAGGTVVHINAGI 240 Query: 241 AGLVGALLIGKRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEANGGAALAMTN 300 AGLVGALL+G+RTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEA+GGAALAMTN Sbjct: 241 AGLVGALLVGRRTGYGKELMAPHSLTMTMIGASLLWVGWFGFNAGSNLEASGGAALAMTN 300 Query: 301 SFVATAAAALSWMFAEWIIKGHPSLLGALSGAVAGLVAVTPAAGFAGPMGAIVLGLVVGV 360 SFVATAAAALSWMFAEWI KGHPS+LGALSGAVAGLVAVTPAAGF+GPMGAIVLGLVVGV Sbjct: 301 SFVATAAAALSWMFAEWIFKGHPSVLGALSGAVAGLVAVTPAAGFSGPMGAIVLGLVVGV 360 Query: 361 VCLFFCTVVKNALGYDDSLDVFGVHCVGGIVGALGTGILVNPALGGAGIIDYTAIPPKVA 420 VCLFFCTVVKNAL YDDSLDVFGVH VGGIVGA+GTGILVNPALGG G+ DY A KV Sbjct: 361 VCLFFCTVVKNALKYDDSLDVFGVHAVGGIVGAIGTGILVNPALGGTGVYDYVA--GKVG 418 Query: 421 DYDFAAQMISQVWGVGTTLVWSGIGSAILYKIVDVIVGLRANVETEREGLDITEHTERAY 480 DYD Q+ISQ WGVGTT++ SGIGSAILYK+VDVIVGLRA VE EREGLD+ EHTERAY Sbjct: 419 DYDMTTQLISQCWGVGTTVLLSGIGSAILYKVVDVIVGLRAPVEVEREGLDLVEHTERAY 478 Query: 481 NM 482 NM Sbjct: 479 NM 480