BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0192.0038.p         (108 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767252.1| nitrogen regulatory protein PII [Bradyrhizobium...   211   3e-53
ref|YP_530165.1| nitrogen regulatory protein P-II (GlnB, GlnK) [...   207   4e-52
ref|YP_483994.1| nitrogen regulatory protein P-II (GlnB, GlnK) [...   205   2e-51
ref|NP_945627.1| GlnK nitrogen regulatory protein P-II [Rhodopse...   204   5e-51
ref|YP_567588.1| nitrogen regulatory protein P-II [Rhodopseudomo...   203   8e-51

>ref|NP_767252.1| nitrogen regulatory protein PII [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45877.1| nitrogen regulatory protein PII [Bradyrhizobium japonicum USDA 110]
          Length = 133

 Score =  211 bits (537), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/108 (98%), Positives = 107/108 (99%)

Query: 1   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 60
           MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA
Sbjct: 26  MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 85

Query: 61  VNSDQVDKTIDAITSAAKTGQIGDGKIFVISLDHAVRIRTGEADAAAL 108
           V SDQVDKTIDAITSAAKTGQIGDGKIFVI+LDHAVRIRTGEADAAAL
Sbjct: 86  VASDQVDKTIDAITSAAKTGQIGDGKIFVINLDHAVRIRTGEADAAAL 133


>ref|YP_530165.1| nitrogen regulatory protein P-II (GlnB, GlnK) [Rhodopseudomonas
           palustris BisB18]
 gb|ABD85846.1| nitrogen regulatory protein P-II [Rhodopseudomonas palustris
           BisB18]
          Length = 112

 Score =  207 bits (527), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 103/108 (95%), Positives = 107/108 (99%)

Query: 1   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 60
           MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA
Sbjct: 5   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 64

Query: 61  VNSDQVDKTIDAITSAAKTGQIGDGKIFVISLDHAVRIRTGEADAAAL 108
           + S+QVDKTI+AITSAAKTGQIGDGKIFVI+LDHAVRIRTGEADAAAL
Sbjct: 65  IASNQVDKTIEAITSAAKTGQIGDGKIFVIALDHAVRIRTGEADAAAL 112


>ref|YP_483994.1| nitrogen regulatory protein P-II (GlnB, GlnK) [Rhodopseudomonas
           palustris HaA2]
 gb|ABD05083.1| nitrogen regulatory protein P-II [Rhodopseudomonas palustris HaA2]
          Length = 112

 Score =  205 bits (521), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 102/108 (94%), Positives = 106/108 (98%)

Query: 1   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 60
           MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA
Sbjct: 5   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 64

Query: 61  VNSDQVDKTIDAITSAAKTGQIGDGKIFVISLDHAVRIRTGEADAAAL 108
           + +DQV+KTI+AITSAAKTGQIGDGKIFVI LDHAVRIRTGEADAAAL
Sbjct: 65  IATDQVEKTIEAITSAAKTGQIGDGKIFVIGLDHAVRIRTGEADAAAL 112


>ref|NP_945627.1| GlnK nitrogen regulatory protein P-II [Rhodopseudomonas palustris
           CGA009]
 ref|YP_001989313.1| nitrogen regulatory protein P-II [Rhodopseudomonas palustris TIE-1]
 emb|CAE25718.1| GlnK, nitrogen regulatory protein P-II [Rhodopseudomonas palustris
           CGA009]
 gb|ACE98837.1| nitrogen regulatory protein P-II [Rhodopseudomonas palustris TIE-1]
          Length = 112

 Score =  204 bits (518), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/108 (93%), Positives = 106/108 (98%)

Query: 1   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 60
           MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA
Sbjct: 5   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 64

Query: 61  VNSDQVDKTIDAITSAAKTGQIGDGKIFVISLDHAVRIRTGEADAAAL 108
           + ++QV+KTI+AITSAAKTGQIGDGKIFVI LDHAVRIRTGEADAAAL
Sbjct: 65  IANEQVEKTIEAITSAAKTGQIGDGKIFVIGLDHAVRIRTGEADAAAL 112


>ref|YP_567588.1| nitrogen regulatory protein P-II [Rhodopseudomonas palustris BisB5]
 gb|ABE37687.1| nitrogen regulatory protein P-II [Rhodopseudomonas palustris BisB5]
          Length = 112

 Score =  203 bits (516), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 100/108 (92%), Positives = 106/108 (98%)

Query: 1   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 60
           MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA
Sbjct: 5   MAIIKPFKLEEVRDALTAIGVHGLTVTEVKGYGRQKGHTEIYRGAEYAVSFLPKIKIEVA 64

Query: 61  VNSDQVDKTIDAITSAAKTGQIGDGKIFVISLDHAVRIRTGEADAAAL 108
           + +DQV+KTI+AIT+AAKTGQIGDGKIFV+ LDHAVRIRTGEADAAAL
Sbjct: 65  IATDQVEKTIEAITTAAKTGQIGDGKIFVLGLDHAVRIRTGEADAAAL 112