BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0034.p (332 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EGP58079.1| hypothetical protein Agau_C100571 [Agrobacterium ... 326 4e-87 ref|YP_002546237.1| hypothetical protein Arad_4632 [Agrobacteriu... 325 5e-87 ref|YP_004279808.1| hypothetical protein AGROH133_08716 [Agrobac... 321 1e-85 ref|ZP_08526854.1| hypothetical protein AGRO_0833 [Agrobacterium... 318 7e-85 ref|YP_002547753.1| hypothetical protein Avi_6020 [Agrobacterium... 315 5e-84 >gb|EGP58079.1| hypothetical protein Agau_C100571 [Agrobacterium tumefaciens F2] Length = 327 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 167/335 (49%), Positives = 219/335 (65%), Gaps = 11/335 (3%) Query: 1 MKSAIAGLDPAAHKPHWLHDPERRWPQTNCYVDLLIEVMHATGNDPVAALGFTVAQDFEG 60 M+ GLDP H H LH ER WP+TNCY+DL IEV+ A G P A GFT+ QDFEG Sbjct: 1 MRQIFPGLDPKNHVQHPLHSSERMWPETNCYIDLWIEVLAAKGLPPEAMFGFTLTQDFEG 60 Query: 61 DQFTFFKFPTADLQRLAGLDIQELSVFDRLETHVLNQIERGRLPLVEVDAFHLPDTKGIT 120 DQFTFFK P DL+ L G+ EL++FDR+E H+ Q+ERGR+ L+E+D+F++PDT G+ Sbjct: 61 DQFTFFKVPLEDLEALYGVRATELAIFDRVENHIEAQLERGRICLIEMDSFYMPDTHGVG 120 Query: 121 YRTGHSKTTVGINVLVPGRRHMAYFHNDGYFALDGDDYDGIFGQ--RDGAPAGGLPLFPY 178 Y+ H KTT+ IN L +R + YFHN G+F L G+D+DG+F ++ P P PY Sbjct: 121 YQKEHGKTTIAINRLDLAKRELDYFHNAGFFHLSGEDFDGLFQHHLQETDP----PFLPY 176 Query: 179 AEFVKFDATRPSRDSVGAATE-ILAQHLRRRPKRNPLDAYAAVFGRHAEVLAGRSSEYFH 237 EF KF T PS + E +L H RRP NP+ A+AAVF E +A R +FH Sbjct: 177 TEFAKFADTNPSPAHIRKTAERLLKFHFSRRPSANPVRAFAAVFPAQVEKVANRPFGFFH 236 Query: 238 VYAFNTLRQVGANFELLSSHLEWLGRHGETSLAEAIEAAASIAEGAKVMQFKLARAMARH 297 YAFNTLRQ+GANFEL +SHLEWL G +EA + A I+E AK +QF+LARA+ RH Sbjct: 237 KYAFNTLRQLGANFELAASHLEWLDNDG---FSEARDHALRISEVAKTVQFQLARAVTRH 293 Query: 298 RFDGLADGIGPMAKAWQTVMDALDGRMTDLASKAA 332 +FD LA + P A AW +MD+L ++++ AS+AA Sbjct: 294 KFDALAAVLDPAADAWDGLMDSLAAKLSN-ASEAA 327 >ref|YP_002546237.1| hypothetical protein Arad_4632 [Agrobacterium radiobacter K84] gb|ACM28304.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 319 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 164/325 (50%), Positives = 212/325 (65%), Gaps = 7/325 (2%) Query: 1 MKSAIAGLDPAAHKPHWLHDPERRWPQTNCYVDLLIEVMHATGNDPVAALGFTVAQDFEG 60 M S AGLDPAA++PH LHD ER WP+TNCY+DL IEV+ + P A LGFT+ QDFEG Sbjct: 1 MASIFAGLDPAAYQPHALHDSERMWPETNCYIDLWIEVLASLKLPPEAMLGFTMGQDFEG 60 Query: 61 DQFTFFKFPTADLQRLAGLDIQELSVFDRLETHVLNQIERGRLPLVEVDAFHLPDTKGIT 120 DQFTFFK P DL+ L G+ EL+++D++E HV QI RGRL LVE+D+F++PDT+G+ Sbjct: 61 DQFTFFKVPLEDLEALYGIRCTELAIYDKVERHVAEQIGRGRLCLVEMDSFYMPDTQGVG 120 Query: 121 YRTGHSKTTVGINVLVPGRRHMAYFHNDGYFALDGDDYDGIFGQRDGAPAGGLPLFPYAE 180 YR H KTTV IN L R + YFHN G+F L G+D+DG+F LP PY E Sbjct: 121 YRREHGKTTVAINRLNLAGRELDYFHNGGFFQLSGEDFDGLFQLH--LTDEDLPFLPYTE 178 Query: 181 FVKFDATRPSRDSVGAAT-EILAQHLRRRPKRNPLDAYAAVFGRHAEVLAGRSSEYFHVY 239 F KF +P ++ + ++LA H RRRP NP+ ++AAVF E LA R +FH Y Sbjct: 179 FAKFPEIKPGEAAIRQTSRQLLAFHFRRRPVANPIRSFAAVFPAQVEALAERPFGFFHKY 238 Query: 240 AFNTLRQVGANFELLSSHLEWLGRHGETSLAEAIEAAASIAEGAKVMQFKLARAMARHRF 299 AFNTLRQVGANFEL SHL+WL AE A I+E AK +QF+LARA+ R +F Sbjct: 239 AFNTLRQVGANFELAGSHLDWLS----ADFAEVAAQARRISEVAKSVQFQLARAITRKKF 294 Query: 300 DGLADGIGPMAKAWQTVMDALDGRM 324 + L + P A AW ++M L+ ++ Sbjct: 295 EPLQTALDPAADAWDSMMGLLEQKL 319 >ref|YP_004279808.1| hypothetical protein AGROH133_08716 [Agrobacterium sp. H13-3] gb|ADY65488.1| hypothetical protein AGROH133_08716 [Agrobacterium sp. H13-3] Length = 327 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 161/334 (48%), Positives = 215/334 (64%), Gaps = 10/334 (2%) Query: 1 MKSAIAGLDPAAHKPHWLHDPERRWPQTNCYVDLLIEVMHATGNDPVAALGFTVAQDFEG 60 M+ GLDP + H LH ER WP+TNCY+DL IEV+ + G P A GFT+ QDFEG Sbjct: 1 MRQIFPGLDPKNYVQHPLHSSERMWPETNCYIDLWIEVLASKGLPPEAMFGFTLTQDFEG 60 Query: 61 DQFTFFKFPTADLQRLAGLDIQELSVFDRLETHVLNQIERGRLPLVEVDAFHLPDTKGIT 120 DQFTFFK P DL+ L G+ EL++FDR+E H+ Q+ERGR+ L+E+D+F++PDT G+ Sbjct: 61 DQFTFFKVPLEDLEALYGVRATELAIFDRVENHIEAQLERGRICLIEMDSFYMPDTHGVG 120 Query: 121 YRTGHSKTTVGINVLVPGRRHMAYFHNDGYFALDGDDYDGIFGQR--DGAPAGGLPLFPY 178 YR H KTT+ IN L R + YFHN G+F L G+D+DG+F + P P PY Sbjct: 121 YRKEHGKTTIAINRLDLANRELDYFHNAGFFHLSGEDFDGLFQHHLTESEP----PFLPY 176 Query: 179 AEFVKFDATRPSRDSVGAATE-ILAQHLRRRPKRNPLDAYAAVFGRHAEVLAGRSSEYFH 237 EF KF + PS + E +L H RRP NP+ A+AA+F E +A R +FH Sbjct: 177 TEFAKFADSNPSPAHIRKTAERLLKFHFSRRPSDNPVRAFAAMFPAQVEKVADRPFGFFH 236 Query: 238 VYAFNTLRQVGANFELLSSHLEWLGRHGETSLAEAIEAAASIAEGAKVMQFKLARAMARH 297 YAFNTLRQ+GANFEL +SHLEWL + + AEA + A I+E AK +QF+LARA+ R Sbjct: 237 KYAFNTLRQLGANFELAASHLEWLDK---SEFAEARDHALRISEVAKTVQFQLARAVTRR 293 Query: 298 RFDGLADGIGPMAKAWQTVMDALDGRMTDLASKA 331 +FD LA + P A+AW VM+AL ++++ + A Sbjct: 294 KFDALASVLDPAAEAWDGVMEALAAKLSNTSEAA 327 >ref|ZP_08526854.1| hypothetical protein AGRO_0833 [Agrobacterium sp. ATCC 31749] gb|EGL66112.1| hypothetical protein AGRO_0833 [Agrobacterium sp. ATCC 31749] Length = 327 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 161/333 (48%), Positives = 215/333 (64%), Gaps = 7/333 (2%) Query: 1 MKSAIAGLDPAAHKPHWLHDPERRWPQTNCYVDLLIEVMHATGNDPVAALGFTVAQDFEG 60 M+ GLDP + H LH ER WP+TNCY+DL IEV+ + G P A GFT+ QDFEG Sbjct: 1 MRQIFPGLDPNTYVQHPLHSSERMWPETNCYIDLWIEVLASKGLSPEAMFGFTLTQDFEG 60 Query: 61 DQFTFFKFPTADLQRLAGLDIQELSVFDRLETHVLNQIERGRLPLVEVDAFHLPDTKGIT 120 DQFTFFK P DL+ L G+ EL++FD++E H+ Q+ERGR+ L+E+D+F++PDT G+ Sbjct: 61 DQFTFFKVPLEDLEALYGVRATELAIFDKVEDHIATQLERGRICLIEMDSFYMPDTHGVG 120 Query: 121 YRTGHSKTTVGINVLVPGRRHMAYFHNDGYFALDGDDYDGIFGQRDGAPAGGLPLFPYAE 180 Y+ H KTTV IN L +R + YFHN G+F L G+D+DG+F P PY E Sbjct: 121 YQKEHGKTTVAINRLDLEKRELDYFHNAGFFYLSGEDFDGLFQHH--LAETDPPFLPYTE 178 Query: 181 FVKFDATRPSRDSVGAATE-ILAQHLRRRPKRNPLDAYAAVFGRHAEVLAGRSSEYFHVY 239 F KF + PS + E +L H RRP NP+ A+A VF E +A R +FH Y Sbjct: 179 FAKFADSNPSPAHIRKTAERLLKFHFSRRPSANPVRAFAKVFPAQVERVADRPFGFFHKY 238 Query: 240 AFNTLRQVGANFELLSSHLEWLGRHGETSLAEAIEAAASIAEGAKVMQFKLARAMARHRF 299 AFNTLRQ+GANFEL +SHLEWL + G +EA + A I+E AK +QF+LARA+ R +F Sbjct: 239 AFNTLRQLGANFELAASHLEWLDKQG---FSEARDHALKISEVAKTVQFQLARAVTRRKF 295 Query: 300 DGLADGIGPMAKAWQTVMDALDGRMTDLASKAA 332 D LA + P A AW +M++L +++D AS+AA Sbjct: 296 DALATVLEPAADAWDGLMESLGEKLSD-ASEAA 327 >ref|YP_002547753.1| hypothetical protein Avi_6020 [Agrobacterium vitis S4] gb|ACM39037.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 320 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 163/323 (50%), Positives = 202/323 (62%), Gaps = 6/323 (1%) Query: 3 SAIAGLDPAAHKPHWLHDPERRWPQTNCYVDLLIEVMHATGNDPVAALGFTVAQDFEGDQ 62 + + LDPA + PH LH ER WP+TNCYVDL IEV+ G P A LGFT+ QDFEGDQ Sbjct: 2 TTVLPLDPARYTPHLLHSAERMWPETNCYVDLWIEVLCVLGLPPEAMLGFTLTQDFEGDQ 61 Query: 63 FTFFKFPTADLQRLAGLDIQELSVFDRLETHVLNQIERGRLPLVEVDAFHLPDTKGITYR 122 FTFFK P DL+ L G+ + EL++FDR E HV QI RGRL LVE+D++ +PDT G+ YR Sbjct: 62 FTFFKVPLEDLEALYGIRVTELAIFDRAEAHVAQQISRGRLCLVEMDSYFMPDTAGVGYR 121 Query: 123 TGHSKTTVGINVLVPGRRHMAYFHNDGYFALDGDDYDGIFGQRDGAPAGGLPLFPYAEFV 182 H KTTVG+N L R M YFHN G+F L+ +D+DGI+ + AP P PY EF Sbjct: 122 QHHGKTTVGVNRLDLAGRSMDYFHNGGFFRLEAEDFDGIW--QLAAPETA-PFLPYTEFA 178 Query: 183 KFDATRPSRDSVGA-ATEILAQHLRRRPKRNPLDAYAAVFGRHAEVLAGRSSEYFHVYAF 241 KF TRP + A A + A H RRP+ NP +A VF E +A R YFH YAF Sbjct: 179 KFPETRPDETHLRAVAKRLFAFHFARRPQGNPFAGFAEVFPAQVEAIAERPFGYFHTYAF 238 Query: 242 NTLRQVGANFELLSSHLEWLGRHGETSLAEAIEAAASIAEGAKVMQFKLARAMARHRFDG 301 NTLRQ GANFELL+SHL+WL + I A I+E AK +QF+LARA+ R +FD Sbjct: 239 NTLRQFGANFELLASHLKWLA--ADDRYTNEIAEALRISELAKTVQFQLARAVTRKKFDP 296 Query: 302 LADGIGPMAKAWQTVMDALDGRM 324 L + P AW +M L +M Sbjct: 297 LKAALDPAIDAWDRLMTGLADKM 319