BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0027.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767251.1| ATP-dependent Clp protease proteolytic subunit ... 394 e-108 ref|YP_001202708.1| ATP-dependent Clp protease proteolytic subun... 360 8e-98 ref|YP_004793360.1| ATP-dependent Clp protease proteolytic subun... 345 2e-93 ref|YP_002029173.1| ATP-dependent Clp protease proteolytic subun... 345 2e-93 gb|EFV87052.1| ATP-dependent Clp protease proteolytic subunit [A... 345 2e-93 >ref|NP_767251.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium japonicum USDA 110] sp|Q89WR7.1|CLPP1_BRAJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 dbj|BAC45876.1| ATP-dependent protease proteolytic subunit [Bradyrhizobium japonicum USDA 110] Length = 200 Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/200 (92%), Positives = 195/200 (97%) Query: 1 MRDMMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDAMSGLVCAQLLFLEAENP 60 MRDM+QLVPMV+EQS+RGERSFDIYSRLLRERIIFLNGEVNDAMSGLVCAQLLFLEAENP Sbjct: 1 MRDMLQLVPMVVEQSARGERSFDIYSRLLRERIIFLNGEVNDAMSGLVCAQLLFLEAENP 60 Query: 61 HKPINLYINSYGGVITSGLAMYDTMQFIKAPVHTLCMGTARSMGSFLLMAGEPGHRAALP 120 ++PINLYINSYGGV+TSGLAMYDTMQFIKAPVHTLCMGTARSMGSFLLMAGE GHRAALP Sbjct: 61 NRPINLYINSYGGVVTSGLAMYDTMQFIKAPVHTLCMGTARSMGSFLLMAGERGHRAALP 120 Query: 121 NASLHVHQPLGGFQGQASDILIHATEMQETKRRIIRLYAQHCGRTEADVERTLDRDHFMS 180 NASLHVHQPLGGFQGQASDILIHA EMQETKRRI RLYAQHCGRTEA+VERTLDRDHFM+ Sbjct: 121 NASLHVHQPLGGFQGQASDILIHANEMQETKRRITRLYAQHCGRTEAEVERTLDRDHFMT 180 Query: 181 AQQALEWGLIDKVFAERDAA 200 AQQ +EWGLID+VFAERDA Sbjct: 181 AQQGVEWGLIDRVFAERDAT 200 >ref|YP_001202708.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium sp. ORS 278] emb|CAL74465.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) [Bradyrhizobium sp. ORS 278] Length = 205 Score = 360 bits (924), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 167/198 (84%), Positives = 184/198 (92%) Query: 1 MRDMMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDAMSGLVCAQLLFLEAENP 60 MRD MQLVPMVIEQSSRGERSFDIYSRLLRERI+FLNGEVND +S LVCAQLLFLEAENP Sbjct: 1 MRDTMQLVPMVIEQSSRGERSFDIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENP 60 Query: 61 HKPINLYINSYGGVITSGLAMYDTMQFIKAPVHTLCMGTARSMGSFLLMAGEPGHRAALP 120 +PI+LYINS GGV+TSGLAMYDTMQF+KAPVHTLCMGTARSMGSFLLMAGEPG R ALP Sbjct: 61 KRPIHLYINSPGGVVTSGLAMYDTMQFVKAPVHTLCMGTARSMGSFLLMAGEPGERTALP 120 Query: 121 NASLHVHQPLGGFQGQASDILIHATEMQETKRRIIRLYAQHCGRTEADVERTLDRDHFMS 180 NASLHVHQPLGGFQGQASDI+IHA EM++TKRR+IRLYA+HCGR+ DVERTLDRDHFM+ Sbjct: 121 NASLHVHQPLGGFQGQASDIMIHAREMEQTKRRMIRLYAEHCGRSYEDVERTLDRDHFMT 180 Query: 181 AQQALEWGLIDKVFAERD 198 A +A +WGLID+V +RD Sbjct: 181 ADEAQDWGLIDRVVKQRD 198 >ref|YP_004793360.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp. JV3] gb|AEM52134.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp. JV3] Length = 202 Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 163/199 (81%), Positives = 179/199 (89%) Query: 1 MRDMMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDAMSGLVCAQLLFLEAENP 60 MRD MQLVPMV+E+S RGERS+DIYSRLLRERIIFLNGEV+D +S LVCAQLLFLE+ENP Sbjct: 1 MRDRMQLVPMVVERSERGERSYDIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLESENP 60 Query: 61 HKPINLYINSYGGVITSGLAMYDTMQFIKAPVHTLCMGTARSMGSFLLMAGEPGHRAALP 120 KPI+LYINS GGVI+SGLAMYDTMQ+I APVHTLCMGTARSMGSFLLMAGEPGHRAAL Sbjct: 61 EKPIHLYINSPGGVISSGLAMYDTMQYISAPVHTLCMGTARSMGSFLLMAGEPGHRAALA 120 Query: 121 NASLHVHQPLGGFQGQASDILIHATEMQETKRRIIRLYAQHCGRTEADVERTLDRDHFMS 180 NASLHVHQPLGG QGQASDI IHA EMQ TK+RI RLYAQHCGR+ +VE+TLDRD FMS Sbjct: 121 NASLHVHQPLGGVQGQASDIFIHAEEMQRTKQRITRLYAQHCGRSVEEVEQTLDRDRFMS 180 Query: 181 AQQALEWGLIDKVFAERDA 199 A+QA +WGLID+V RDA Sbjct: 181 AEQACQWGLIDQVLVRRDA 199 >ref|YP_002029173.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas maltophilia R551-3] gb|ACF52490.1| Endopeptidase Clp [Stenotrophomonas maltophilia R551-3] Length = 202 Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 163/199 (81%), Positives = 179/199 (89%) Query: 1 MRDMMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDAMSGLVCAQLLFLEAENP 60 MRD MQL+PMV+E+S RGERS+DIYSRLLRERIIFLNGEV+D +S LVCAQLLFLE+ENP Sbjct: 1 MRDRMQLIPMVVERSERGERSYDIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLESENP 60 Query: 61 HKPINLYINSYGGVITSGLAMYDTMQFIKAPVHTLCMGTARSMGSFLLMAGEPGHRAALP 120 KPI+LYINS GGVI+SGLAMYDTMQ+I APVHTLCMGTARSMGSFLLMAGEPGHRAAL Sbjct: 61 EKPIHLYINSPGGVISSGLAMYDTMQYISAPVHTLCMGTARSMGSFLLMAGEPGHRAALA 120 Query: 121 NASLHVHQPLGGFQGQASDILIHATEMQETKRRIIRLYAQHCGRTEADVERTLDRDHFMS 180 NASLHVHQPLGG QGQASDI IHA EMQ TK+RI RLYAQHCGR+ +VE+TLDRD FMS Sbjct: 121 NASLHVHQPLGGVQGQASDIFIHAEEMQRTKQRITRLYAQHCGRSVEEVEQTLDRDRFMS 180 Query: 181 AQQALEWGLIDKVFAERDA 199 A+QA EWGLID+V RDA Sbjct: 181 AEQACEWGLIDQVLLRRDA 199 >gb|EFV87052.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter xylosoxidans C54] Length = 201 Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 164/200 (82%), Positives = 181/200 (90%) Query: 1 MRDMMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDAMSGLVCAQLLFLEAENP 60 M + MQLVPMV+EQS RGERSFDIYSRLLRERIIFL+GEVNDA+S LVCAQLLFLEAENP Sbjct: 1 MSETMQLVPMVVEQSGRGERSFDIYSRLLRERIIFLSGEVNDAVSALVCAQLLFLEAENP 60 Query: 61 HKPINLYINSYGGVITSGLAMYDTMQFIKAPVHTLCMGTARSMGSFLLMAGEPGHRAALP 120 KPI++YINS GGVITSGLAMYDTMQFIK+PVHTLCMGTARSMGSFLLMAGEPG RAAL Sbjct: 61 GKPIHMYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGKRAALA 120 Query: 121 NASLHVHQPLGGFQGQASDILIHATEMQETKRRIIRLYAQHCGRTEADVERTLDRDHFMS 180 NASLHVHQPLGGFQGQASD+LIHA EMQ TK+RIIRLYA+HCGR+ DVER+LDRD +M+ Sbjct: 121 NASLHVHQPLGGFQGQASDMLIHAEEMQRTKQRIIRLYAEHCGRSYEDVERSLDRDRYMT 180 Query: 181 AQQALEWGLIDKVFAERDAA 200 A++A+EWGLID V R A Sbjct: 181 AEEAVEWGLIDHVMDARSAG 200