BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0022.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236495.1| hypothetical protein BBta_0296 [Bradyrhizobi... 353 2e-95 ref|YP_001202514.1| hypothetical protein BRADO0309 [Bradyrhizobi... 343 2e-92 ref|ZP_01045106.1| hypothetical protein NB311A_08173 [Nitrobacte... 305 5e-81 ref|YP_316697.1| hypothetical protein Nwi_0077 [Nitrobacter wino... 300 2e-79 ref|NP_767245.1| hypothetical protein bll0605 [Bradyrhizobium ja... 273 3e-71 >ref|YP_001236495.1| hypothetical protein BBta_0296 [Bradyrhizobium sp. BTAi1] gb|ABQ32589.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 290 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 170/292 (58%), Positives = 224/292 (76%), Gaps = 5/292 (1%) Query: 1 MSNRNWFYASEGQQKGPLPETQLRDLITRGMVGADTLVWTEGMAGWQKAGEIPGLVPSAG 60 MSNR+W+YA++GQQ+GP+ E +LRDLI R +V ADTL+W++GMAGW+KAG IPGL+ +G Sbjct: 1 MSNRSWYYAAQGQQQGPISEDELRDLIARSVVTADTLLWSDGMAGWEKAGRIPGLM--SG 58 Query: 61 APPAFPQAGGPPPVVASGSYSGGALSADFPIWGLFGRSLLMFIGQILVIPAPWTATGLYR 120 P P A P G S GALSA W FG +LL +GQ+++I APWTA LYR Sbjct: 59 VPEIPPAA---PAFDIGGPASAGALSAKLDTWPYFGWALLYVVGQLVIILAPWTAVYLYR 115 Query: 121 FAIPYIRVPGRPHFAFTGQPLDIWWVFIVLGLLTYAGAANSNIVTLLSLLLQGFLSWMIV 180 + + IRVPGRP+ +FTGQPLDIW+VF+ LG+LTY G ++ + L+S++ Q L WMI+ Sbjct: 116 YVVERIRVPGRPNLSFTGQPLDIWYVFVGLGVLTYIGTSDRPFLQLVSVVGQALLGWMIL 175 Query: 181 RWIIGHLSSSGQDLPISFKGSPVAYVGWYVAMVVSAITIIGWAWVLTAWMRWICRNIDGT 240 RW+ ++S+G+ LP+ F+GSP+AY GWY+A +VSAITIIGWAWVLTAWMRWICRN+ G+ Sbjct: 176 RWVATKIASNGEPLPLRFEGSPLAYFGWYLATLVSAITIIGWAWVLTAWMRWICRNVQGS 235 Query: 241 RREVSFNASGIEVLWRTIVFTIACGFLIPIPWVLRWYGNWFVSQFALTERGA 292 RRE+ FNASG++VLWRT++F + C F+IPIPW+LRWY W+VSQFAL R A Sbjct: 236 RRELVFNASGLDVLWRTLLFAVGCAFIIPIPWLLRWYSTWYVSQFALVPRTA 287 >ref|YP_001202514.1| hypothetical protein BRADO0309 [Bradyrhizobium sp. ORS 278] emb|CAL74266.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 291 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 159/292 (54%), Positives = 218/292 (74%), Gaps = 4/292 (1%) Query: 1 MSNRNWFYASEGQQKGPLPETQLRDLITRGMVGADTLVWTEGMAGWQKAGEIPGLVPSAG 60 MSNR+W+YA++GQQ+GP+ E +LRDLI RG+V A+TL+W++GMAGW+KAG IPGL+ G Sbjct: 1 MSNRSWYYAAQGQQQGPIAEDELRDLIARGVVTAETLLWSDGMAGWEKAGRIPGLM--TG 58 Query: 61 APPAFPQAGGPPPVVASGSYSGGALSADFPIWGLFGRSLLMFIGQILVIPAPWTATGLYR 120 P P GGPP G + GA+S W G +LL +GQ LV+ PWTA LYR Sbjct: 59 VPSIAP--GGPPAFDQGGPAAAGAVSIKLGTWSYLGWTLLYVLGQFLVVITPWTAVYLYR 116 Query: 121 FAIPYIRVPGRPHFAFTGQPLDIWWVFIVLGLLTYAGAANSNIVTLLSLLLQGFLSWMIV 180 + + I VPGRP+ +F GQPL+IW+VF+ +G+LTY G ++ ++ L +++ Q FL WM++ Sbjct: 117 YVVERISVPGRPNLSFIGQPLEIWYVFVGMGVLTYVGMSDQPLIKLAAIIAQAFLGWMVM 176 Query: 181 RWIIGHLSSSGQDLPISFKGSPVAYVGWYVAMVVSAITIIGWAWVLTAWMRWICRNIDGT 240 RW++ ++S+G+ LPI F+GSPV Y WY+ ++VSA+TI+GWAWV TAWMRWICRNI GT Sbjct: 177 RWVLSRIASNGEPLPIRFEGSPVVYFAWYLGLIVSAVTIVGWAWVATAWMRWICRNIQGT 236 Query: 241 RREVSFNASGIEVLWRTIVFTIACGFLIPIPWVLRWYGNWFVSQFALTERGA 292 RREV FN +G++VLWRT+VF + C +IPIPW+LRWY W+VSQFA+ RG+ Sbjct: 237 RREVVFNGTGLQVLWRTLVFVLGCSVIIPIPWLLRWYSAWYVSQFAVVPRGS 288 >ref|ZP_01045106.1| hypothetical protein NB311A_08173 [Nitrobacter sp. Nb-311A] gb|EAQ37111.1| hypothetical protein NB311A_08173 [Nitrobacter sp. Nb-311A] Length = 307 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 156/292 (53%), Positives = 201/292 (68%), Gaps = 2/292 (0%) Query: 1 MSNRNWFYASEGQQKGPLPETQLRDLITRGMVGADTLVWTEGMAGWQKAGEIPGLVPSAG 60 M NR WF+AS Q+GP E +LRD I RG++ ADT VWTEGM+ WQ+AG+IPGL+ S Sbjct: 14 MPNRLWFFASGNTQQGPYSEDKLRDFIARGVINADTHVWTEGMSAWQRAGDIPGLLSSGS 73 Query: 61 APPAFPQAGGPPPVVASGSY--SGGALSADFPIWGLFGRSLLMFIGQILVIPAPWTATGL 118 A P A +G +G LS D IW L GR+L+ IG +L++PAPW ATG Sbjct: 74 AAAPMPAAAAREGEALTGRDGPAGVPLSVDLNIWALLGRALIFVIGFLLIVPAPWVATGF 133 Query: 119 YRFAIPYIRVPGRPHFAFTGQPLDIWWVFIVLGLLTYAGAANSNIVTLLSLLLQGFLSWM 178 Y + I +RVP RP +FTGQP+DIWWVF++L L Y+G + ++ + +Q +LSWM Sbjct: 134 YGWFISRVRVPQRPGLSFTGQPMDIWWVFVLLALCAYSGLTEIPYIGIILIPVQAWLSWM 193 Query: 179 IVRWIIGHLSSSGQDLPISFKGSPVAYVGWYVAMVVSAITIIGWAWVLTAWMRWICRNID 238 V+WI+ ++S+ GQ L +SF+G + YVGW+V + VS ITIIGWAWV TA RWI RNID Sbjct: 194 TVKWIVANISAHGQPLQLSFRGEAMHYVGWFVLLNVSFITIIGWAWVTTAMTRWIFRNID 253 Query: 239 GTRREVSFNASGIEVLWRTIVFTIACGFLIPIPWVLRWYGNWFVSQFALTER 290 GTRRE+ FNASG+EVLWRT+V I C +IPIPWVLRW+ W+VSQ AL R Sbjct: 254 GTRREIIFNASGLEVLWRTVVVAIGCILIIPIPWVLRWFARWYVSQVALAAR 305 >ref|YP_316697.1| hypothetical protein Nwi_0077 [Nitrobacter winogradskyi Nb-255] gb|ABA03345.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 294 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 153/301 (50%), Positives = 201/301 (66%), Gaps = 16/301 (5%) Query: 1 MSNRNWFYASEGQQKGPLPETQLRDLITRGMVGADTLVWTEGMAGWQKAGEIPGLVPSAG 60 M NR WF+AS Q+GP + QLRD I RG V ADT VWTEGM+ WQ+AG+IPGL+ Sbjct: 1 MPNRQWFFASGNTQQGPYSQDQLRDFIARGAVRADTRVWTEGMSDWQRAGDIPGLLSGGS 60 Query: 61 AP---------PAFPQAGGPPPVVASGSYSGGALSADFPIWGLFGRSLLMFIGQILVIPA 111 A + P A G P+ G LS D IWGL GR+L+ IG +LV+PA Sbjct: 61 AAPAMPPASARESEPLARGTEPI-------GAPLSVDLNIWGLLGRTLIFVIGFLLVLPA 113 Query: 112 PWTATGLYRFAIPYIRVPGRPHFAFTGQPLDIWWVFIVLGLLTYAGAANSNIVTLLSLLL 171 PW AT Y + I +RVP RP+ +FTGQP DIWWVF++L L Y+G + + ++ + + Sbjct: 114 PWVATSFYGWLISRVRVPQRPNLSFTGQPTDIWWVFVLLALCAYSGLTDIPYIGIILIPV 173 Query: 172 QGFLSWMIVRWIIGHLSSSGQDLPISFKGSPVAYVGWYVAMVVSAITIIGWAWVLTAWMR 231 Q +LSWM ++W++ ++S++GQ L +SF+G + Y+GW+V + +S ITIIGWAWV TA R Sbjct: 174 QAWLSWMTIKWVVANISANGQPLRLSFRGEALHYIGWFVLLNLSFITIIGWAWVTTAMTR 233 Query: 232 WICRNIDGTRREVSFNASGIEVLWRTIVFTIACGFLIPIPWVLRWYGNWFVSQFALTERG 291 W+ RNIDGTRRE+ FNASG+EVLWRT+V I C +IPIPWVL W W+VSQ AL R Sbjct: 234 WMFRNIDGTRREIIFNASGLEVLWRTVVVAIGCILIIPIPWVLGWIARWYVSQVALAPRT 293 Query: 292 A 292 A Sbjct: 294 A 294 >ref|NP_767245.1| hypothetical protein bll0605 [Bradyrhizobium japonicum USDA 110] dbj|BAC45870.1| bll0605 [Bradyrhizobium japonicum USDA 110] Length = 292 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 150/291 (51%), Positives = 192/291 (65%), Gaps = 5/291 (1%) Query: 5 NWFYASEGQQKGPLPETQLRDLITRGMVGADTLVWTEGMAGWQKAGEIPGLVPSAGAPPA 64 +WFYASEG+Q+GP PE Q RDLI +G+V DTLVWTEGMAGWQKA EIPGLV GAPP Sbjct: 3 SWFYASEGKQQGPFPEGQFRDLIAQGVVRPDTLVWTEGMAGWQKAAEIPGLV-GGGAPPM 61 Query: 65 FPQAGGPPPVVASGSYSGG--ALSADFPIWGLFGRSLLMFIGQILVIPAPWTATGLYRFA 122 P AGGPP + G+ +LS DF I RS++M IG VIPAPW ++ Sbjct: 62 IP-AGGPPTMGGRGNGGAAGGSLSVDFGILEFTWRSIVMLIGMCFVIPAPWVFVWYTKWI 120 Query: 123 IPYIRVPGRPHFAFTGQPLDIW-WVFIVLGLLTYAGAANSNIVTLLSLLLQGFLSWMIVR 181 +P ++VPGRP+ +FTG + + W F + L G S +++ L L+Q L W++++ Sbjct: 121 VPCVKVPGRPNLSFTGNAMALVPWFFGFIVLAIAIGFIGSQLLSNLLFLVQIVLYWLLIK 180 Query: 182 WIIGHLSSSGQDLPISFKGSPVAYVGWYVAMVVSAITIIGWAWVLTAWMRWICRNIDGTR 241 WI+ +L+S+GQ L ISF GS AYVGW + +S ITI+GWAWV A MRW CR+I+GTR Sbjct: 181 WIVANLASNGQPLGISFTGSVWAYVGWNLLFAISIITIVGWAWVAAAQMRWFCRSIEGTR 240 Query: 242 REVSFNASGIEVLWRTIVFTIACGFLIPIPWVLRWYGNWFVSQFALTERGA 292 RE+ F SG+E+LWR IV I +IPIPWV RW NWF SQ L RG+ Sbjct: 241 REIVFKGSGLEILWRGIVAAILFSLIIPIPWVYRWIMNWFASQTELAPRGS 291