BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0014.p (848 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767236.1| hypothetical protein bll0596 [Bradyrhizobium ja... 1218 0.0 ref|NP_772504.1| hypothetical protein bll5864 [Bradyrhizobium ja... 734 0.0 ref|YP_781858.1| PAS/PAC sensor-containing diguanylate cyclase/p... 640 0.0 ref|ZP_07028093.1| diguanylate cyclase/phosphodiesterase with MH... 625 e-177 ref|YP_004632296.1| GGDEF/EAL domain-containing protein [Oligotr... 611 e-172 >ref|NP_767236.1| hypothetical protein bll0596 [Bradyrhizobium japonicum USDA 110] dbj|BAC45861.1| bll0596 [Bradyrhizobium japonicum USDA 110] Length = 833 Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust. Identities = 605/822 (73%), Positives = 699/822 (85%) Query: 5 MFRVLTCLSGEHDWRLVLLAGLVCFVASIVAVNIFHRAIASQARTRLIWIAIAGAAIGYG 64 MFRV +CL+ EHDWRLVLLAGLVCFVASIVAV+IFHRA+AS+A RLIW+AIAGAAIGYG Sbjct: 1 MFRVFSCLTAEHDWRLVLLAGLVCFVASIVAVSIFHRAVASRAWARLIWVAIAGAAIGYG 60 Query: 65 IWATHFIAMLAYEPGIPTGYGIVLTALSLAAAMMLTSGGLGLAAGDSSRWRAPVGGAVIG 124 IWATHF+AMLAYEPG+PT YG+VLT LSLAAAM+LTSGG G+A +S +WRA GG +IG Sbjct: 61 IWATHFVAMLAYEPGVPTNYGLVLTVLSLAAAMILTSGGFGVAVNNSGQWRAAAGGGIIG 120 Query: 125 AGIASMHYLGMWALEVPGRVVWSLDLVAASVVLGMLFGYAALAIAVRRQDRWMSLVAALL 184 AGIASMHY+GMWALEVPGRV WS LV S+ LGM+ GYAALA+A+ +D+W + AALL Sbjct: 121 AGIASMHYIGMWALEVPGRVTWSPGLVLISIGLGMVLGYAALAVALGHKDKWGTFAAALL 180 Query: 185 LTLAIVSHHFTAMGAVEIVPDPLQAPAALSLSPAFLAIVIAGVALSVLGMSLVGVLADRR 244 LTLAIVSHHFTAMGAV+IVPDP A LSLSP FLA+ IAGVALSVLGMS VGVLADRR Sbjct: 181 LTLAIVSHHFTAMGAVQIVPDPTLASDTLSLSPTFLAVAIAGVALSVLGMSFVGVLADRR 240 Query: 245 LALRTRRFEEIISQLSSARQQVEASQKALEEQRFRLDTAINHMGEGLCMFNAEKRLVVCN 304 LA RT RFE+IIS+LS ARQQVE SQ+ ++EQ+ RLDTAIN+M E LCMF+AEKRLVVCN Sbjct: 241 LATRTSRFEQIISELSLARQQVEDSQQEIQEQKLRLDTAINNMVEALCMFDAEKRLVVCN 300 Query: 305 DRYAKMYRLPPELLLPGTAHREIIRHRIANGILKGETSDSAAMQVLATLNALPAGEISSR 364 +RYA++Y+LPPELL GT H +IIRHR+ GILK +TS+ AA Q L+ L ALP +SSR Sbjct: 301 ERYARLYQLPPELLRTGTPHADIIRHRVVTGILKSDTSEGAAEQFLSKLAALPFDAVSSR 360 Query: 365 VDELADGRLICVTRQPMPGGGWVATHRDVTEQRRSEAKITYMAQHDALTDLPNRVLLKEW 424 +DE DGRLICVTRQPM GGGWVATH DVTEQRRSEAKI +MAQHDALTDLPNRVLL+E Sbjct: 361 IDEFTDGRLICVTRQPMAGGGWVATHLDVTEQRRSEAKIAHMAQHDALTDLPNRVLLRER 420 Query: 425 MERALSGARCGGPSLAVLMLDLDRFKDVNDTLGHPAGDALLKSVAARLRRCVSDTTLVAR 484 ME A++ R GG LAVLMLDLDRFK+VNDTLGHP GD+LL++VA RLR C ++T L+AR Sbjct: 421 MEHAIAVTRNGGLDLAVLMLDLDRFKEVNDTLGHPTGDSLLRAVATRLRECTTETALIAR 480 Query: 485 LGGDEFAVIDHVGDPVTEAGLLAEKIRKALSEPIDLGDHRVTTTTSIGIAIAPRDGTDSD 544 LGGDEFAVID+V +P EA LAE IRKAL EP DLGDHRVT TSIGIAIAPRDG DSD Sbjct: 481 LGGDEFAVIDYVTNPAVEAAALAENIRKALCEPFDLGDHRVTVGTSIGIAIAPRDGNDSD 540 Query: 545 EVLRSADLALYSAKSCGRGSFRFFEPELDRLLQARRGLERDMRSALANGEFELHYQPFIH 604 +++SADLALYSAKS GRG+FRFFEPELD L+ ARR LERDMR A+ +FELHYQPF+ Sbjct: 541 VIMKSADLALYSAKSGGRGAFRFFEPELDELMHARRNLERDMRDAIVGRQFELHYQPFVS 600 Query: 605 VASGKTCGFEALLRWHHPQRGMVSPAQFIPLAEETGLIVPLGEWVLRTACAEAAKWPDDL 664 A+GK GFEALLRWHHPQ+G+V P++FIPLAEETGLIVPLGEWVLR ACAEAAKWP + Sbjct: 601 PATGKVNGFEALLRWHHPQQGLVMPSEFIPLAEETGLIVPLGEWVLRAACAEAAKWPPHV 660 Query: 665 KIAINLSPVQFRSPELVPVIVHALASAGISPERLELEVTETAIIQDSEAVFTALSQLHDL 724 +IA+NLSP QFRS ELVPV++ ALAS+G++P RLELEVTET I+ DSEAVF L QL +L Sbjct: 661 RIAVNLSPAQFRSKELVPVVIGALASSGVAPHRLELEVTETVIMHDSEAVFAVLGQLREL 720 Query: 725 GVRIALDDFGTGYSSLSFLQKFPFDKVKIDRSFVSELSGASDESRRIARAIVRFAVSLGK 784 GVRIALDDFGTGYSSLSFLQKFPFDK+KIDRSFV+ELS A E+R +ARA+VRFAVSLGK Sbjct: 721 GVRIALDDFGTGYSSLSFLQKFPFDKIKIDRSFVNELSSARAEARHLARAVVRFAVSLGK 780 Query: 785 TTTAEGVETREQLDILRADACVEVQGFHFSPPVQSEKVAQMI 826 TTTAEGVET+EQLDIL + C+E QG++FS P+ + +A+M+ Sbjct: 781 TTTAEGVETKEQLDILCEEGCLETQGYYFSRPMPASDIARML 822 >ref|NP_772504.1| hypothetical protein bll5864 [Bradyrhizobium japonicum USDA 110] dbj|BAC51129.1| bll5864 [Bradyrhizobium japonicum USDA 110] Length = 799 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/837 (48%), Positives = 551/837 (65%), Gaps = 42/837 (5%) Query: 5 MFRVLTCLSGEHDWRLVLLAGLVCFVASIVAVNIFHRAIASQARTRLIWIAIAGAAIGYG 64 M++VL CL+ +HDWRLV L G VC +AS A+++F RA A+ R+ WIA+ G G Sbjct: 1 MYQVLYCLTDQHDWRLVALGGAVCLLASAAAISLFQRARAASGGARVSWIALDAVVAGCG 60 Query: 65 IWATHFIAMLAYEPGIPTGYGIVLTALSLAAAMMLTSGGLGLAAGDSSRWRAPVGGAVIG 124 IWATHFIAM AY PG Y I +T LSL A+ +T GL ++ + +GGAV+G Sbjct: 61 IWATHFIAMQAYGPGAGGAYNIPVTVLSLIFAIAVTFVGLSISVSATRTIPVALGGAVVG 120 Query: 125 AGIASMHYLGMWALEVPGRVVWSLDLVAASVVLGMLFGYAALAIAVRRQDRWMSLVAALL 184 G+A+MHY GM ALE+P R+ W+ D VA S+VLG++FG AL +A RR +L A +L Sbjct: 121 GGVAAMHYTGMMALEIPARIGWATDTVAVSIVLGIVFGSLALVVAGRRDGVANALGATVL 180 Query: 185 LTLAIVSHHFTAMGAVEIVPDPLQAPAALSLSPAFLAIVIAGVALSVLGMSLVGVLADRR 244 LT+AIVSHHFTAMGAVE+ PDP + LS+ PA L+++ A A++++ ++L + DRR Sbjct: 181 LTVAIVSHHFTAMGAVELTPDPSIVISGLSIPPASLSVLTASAAVAIIAIALAAAVLDRR 240 Query: 245 LALRTRRFEEIISQLSSARQQVEASQKALEEQRFRLDTAINHMGEGLCMFNAEKRLVVCN 304 ++ L Q+ LDTA+ +M +GLCMF+A+ ++++ N Sbjct: 241 ------------------------AKGELGRQQVVLDTALENMSQGLCMFDADGKIMLFN 276 Query: 305 DRYAKMYRLPPELLLPGTAHREIIRHRIANGILKGETSDSAAMQVLATLNALPAGEISSR 364 +RYA M R ++ L G +++R A G +G+ + A V+ ++ +R Sbjct: 277 ERYAAMLR-RTDIALTGRLLVDVLREEQAKGQWQGDADEFFARLVIDAREGRTTSQVVNR 335 Query: 365 VDELADGRLICVTRQPMPGGGWVATHRDVTEQRRSEAKITYMAQHDALTDLPNRVLLKEW 424 + GR I V QPM GGGWVAT D+TE ++AKI++MA+HDALT LPNRVL E Sbjct: 336 L-----GRSIRVVNQPMQGGGWVATFEDITEWLEAQAKISHMARHDALTGLPNRVLFHEQ 390 Query: 425 MERALSGARCG-GPSLAVLMLDLDRFKDVNDTLGHPAGDALLKSVAARLRRCVSDTTLVA 483 +E+ L R G G LAVL LDLD FKD+ND+LGHP GDALLK V RL+ V ++ VA Sbjct: 391 LEQGLR--RTGSGDQLAVLCLDLDHFKDINDSLGHPIGDALLKEVGRRLKATVGESDTVA 448 Query: 484 RLGGDEFAVIDHVGDPVTEAGLLAEKIRKALSEPIDLGDHRVTTTTSIGIAIAPRDGTDS 543 RLGGDEFAV+ A LA ++ + +S P ++ DH++ SIGI+++P+DG+++ Sbjct: 449 RLGGDEFAVVQIGRSEEAAARCLAGRLVEVISAPYEIDDHQIVIGVSIGISLSPQDGSNA 508 Query: 544 DEVLRSADLALYSAKSCGRGSFRFFEPELDRLLQARRGLERDMRSALANGEFELHYQPFI 603 DE+L++ADLALY AK+ GRG++RFFE +D QARR LE D+R+AL EF+ +YQP Sbjct: 509 DELLKNADLALYRAKADGRGTYRFFETGMDARAQARRLLEMDLRAALQRDEFQPYYQPIR 568 Query: 604 HVASGKTCGFEALLRWHHPQRGMVSPAQFIPLAEETGLIVPLGEWVLRTACAEAAKWPDD 663 VASG+ FEALLRW+HPQRG+++P FIPLAEETGLIV LGE+VLR+AC +AA WPDD Sbjct: 569 DVASGRVVVFEALLRWNHPQRGLIAPINFIPLAEETGLIVQLGEFVLRSACTDAATWPDD 628 Query: 664 LKIAINLSPVQFRSPELVPVIVHALASAGISPERLELEVTETAIIQDSEAVFTALSQLHD 723 + +A+NLSPVQFR+P L+ + AL +G+ RLELE+TE+ ++Q+SEA T L +L Sbjct: 629 VDVAVNLSPVQFRNPNLIASVTAALTVSGLPARRLELEITESVLLQNSEATLTTLHELRA 688 Query: 724 LGVRIALDDFGTGYSSLSFLQKFPFDKVKIDRSFVSELSGASDESRRIARAIVRFAVSLG 783 +GVRI+LDDFGTGYSSLS+L+ FPFDK+KIDRSFVSEL+ D S I RA+ SLG Sbjct: 689 MGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVSELATRED-SMAIIRAVTGLGRSLG 747 Query: 784 KTTTAEGVETREQLDILRADACVEVQGFHFSPPVQSEKVAQMIGGRTPAAVERPAVR 840 TTAEGVE QL++LR + C + QG+ FS P + VA M+ ERP +R Sbjct: 748 IVTTAEGVENDAQLELLRREGCTQAQGYLFSKPRPASDVALML--------ERPRLR 796 >ref|YP_781858.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris BisA53] gb|ABJ06878.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) [Rhodopseudomonas palustris BisA53] Length = 802 Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/827 (45%), Positives = 514/827 (62%), Gaps = 37/827 (4%) Query: 5 MFRVLTCLSGEHDWRLVLLAGLVCFVASIVAVNIFHRAIASQARTRLIWIAIAGAAIGYG 64 MF+V CL+ EHD RLV +A +C + S+V V++F R A+Q R+RL+W+A+ + G+G Sbjct: 1 MFKVYACLTTEHDLRLVAVAAAICLLVSMVGVSMFDRCRATQGRSRLMWLALVAISSGFG 60 Query: 65 IWATHFIAMLAYEPGIPTGYGIVLTALSLAAAMMLTSGGLGLAAGDSSRWRAPVGGAVIG 124 WATHFIAMLAY P Y + LT LSLA A+++ G +A SRW A +GGAVIG Sbjct: 61 TWATHFIAMLAYHPSTHASYHLGLTLLSLALAILIIGAGAAVALIGPSRWYAGIGGAVIG 120 Query: 125 AGIASMHYLGMWALEVPGRVVWSLDLVAASVVLGMLFGYAALAIAVRRQDRWMSLVAALL 184 GIA+MHY G+ A++ P ++WS + V AS+VL + F I RR + L+A+LL Sbjct: 121 LGIAAMHYCGILAMQAPLLLIWSQETVLASIVLAVAFSIPGAIIGARRDELGYMLLASLL 180 Query: 185 LTLAIVSHHFTAMGAVEIVPDPLQAPAALSLSPAFLAIVIAGVALSVLGMSLVGVLADRR 244 +++S HFTAM A+ +PDP Q +L+ LA+VIAG A ++LG L+ L DRR Sbjct: 181 FAASVLSLHFTAMSAITALPDPDQTAVGPALTAPSLALVIAGAAAAILGGCLIAALTDRR 240 Query: 245 LALRTRRFEEIISQLSSARQQVEASQKALEEQRFRLDTAINHMGEGLCMFNAEKRLVVCN 304 + V A QK L LD AI +M + LCMF+AE + N Sbjct: 241 F------------------RAVNARQKLL------LDIAIENMPQALCMFDAEGNSTLFN 276 Query: 305 DRYAKMYRLPPELLLPGTAHREIIRHRIANGILKGETSDSAAMQVLATLNALPAGEISSR 364 YA + +P + L G + R ++G L G+ + ++A ++A G + Sbjct: 277 SHYADLMGIPADRL-NGMNLLDQFELRKSHGKLAGDPR-AIYESIMAQISA---GRPIVK 331 Query: 365 VDEL-ADGRLICVTRQPMPGGGWVATHRDVTEQRRSEAKITYMAQHDALTDLPNRVLLKE 423 D L GR++ +T QP+PG GWV T DVTE R+++ +I ++A+HDALTDLPNR +E Sbjct: 332 TDNLIVPGRVLRITEQPLPGTGWVTTIEDVTEWRKTQERIAHLARHDALTDLPNRTTFRE 391 Query: 424 WMERALSGAR--CGGPSLAVLMLDLDRFKDVNDTLGHPAGDALLKSVAARLRRCVSDTTL 481 ++R L R G AVL +DLD FK++ND+LGHP GD LL VA RL C+ D L Sbjct: 392 EIDRVLRYTRREVGA---AVLYIDLDHFKEINDSLGHPIGDELLIEVARRLADCIRDGDL 448 Query: 482 VARLGGDEFAVID-HVGDPVTEAGLLAEKIRKALSEPIDLGDHRVTTTTSIGIAIAPRDG 540 VARLGGDEFAVI +P ++A LA +I +S P +L H V+ S+GIA+AP D Sbjct: 449 VARLGGDEFAVIQISHHEPESDAAALAMRIVSIISTPYELQGHHVSIGASVGIALAPTDA 508 Query: 541 TDSDEVLRSADLALYSAKSCGRGSFRFFEPELDRLLQARRGLERDMRSALANGEFELHYQ 600 ++ DE+++ ADLALY AK+ GRGS+RFFE ++D Q RR L ++R ALA EF L YQ Sbjct: 509 SEPDELIKKADLALYRAKAEGRGSYRFFELDMDASAQTRRLLTTELRLALARNEFALLYQ 568 Query: 601 PFIHVASGKTCGFEALLRWHHPQRGMVSPAQFIPLAEETGLIVPLGEWVLRTACAEAAKW 660 P V S + FEALLRW HP+RG + P QF+ LAE +GLIVP+G+WVL+TACA+AA+W Sbjct: 569 PIRDVESDQIICFEALLRWEHPERGEILPEQFLALAESSGLIVPIGDWVLQTACADAAQW 628 Query: 661 PDDLKIAINLSPVQFRSPELVPVIVHALASAGISPERLELEVTETAIIQDSEAVFTALSQ 720 D+ +++NLSP QFR P LVP + AL ++G++P RLELEVTETA++Q + AL Sbjct: 629 HSDVGVSVNLSPSQFRHPRLVPSVAAALTASGLAPHRLELEVTETALLQQRKPAMAALKA 688 Query: 721 LHDLGVRIALDDFGTGYSSLSFLQKFPFDKVKIDRSFVSELSGASDESRRIARAIVRFAV 780 L LGV +++D FG GY+SLS L FPFD++KID SF+ E+ + D + A+ Sbjct: 689 LRALGVGVSMDHFGAGYASLSSLSSFPFDRIKIDGSFIQEIEQSGDAFAALT-AVTGLGK 747 Query: 781 SLGKTTTAEGVETREQLDILRADACVEVQGFHFSPPVQSEKVAQMIG 827 LG+TT A GVET QL +LRA C E+QG SPP + +V Q++G Sbjct: 748 RLGRTTAATGVETVHQLAMLRATGCAEIQGLLISPPRSAHEVKQILG 794 >ref|ZP_07028093.1| diguanylate cyclase/phosphodiesterase with MHYT sensor [Afipia sp. 1NLS2] gb|EFI50914.1| diguanylate cyclase/phosphodiesterase with MHYT sensor [Afipia sp. 1NLS2] Length = 806 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 334/836 (39%), Positives = 488/836 (58%), Gaps = 35/836 (4%) Query: 5 MFRVLTCLSGEHDWRLVLLAGLVCFVASIVAVNIFHRAIAS-QARTRLIWIAIAGAAIGY 63 M R++TCL +HDWRLVLLA VC + SI A+N++ RA A +A +RL W AG G Sbjct: 1 MLRIITCLQTQHDWRLVLLAAGVCLLTSISAINMYQRATADDKATSRLFWALTAGLVGGC 60 Query: 64 GIWATHFIAMLAYEPGIPTGYGIVLTALSLAAAMMLTSGGLGLAAGDSSRWRAPVGGAVI 123 G+WATHFI MLAY PG+ + ++T SL A+++ G A W +GG ++ Sbjct: 61 GVWATHFIGMLAYTPGVSISFDFLMTVASLGVAIVMMVVGFITATYGDRTWAPLIGGGIL 120 Query: 124 GAGIASMHYLGMWALEVPGRVVWSLDLVAASVVLGMLFGYAALAIAVRRQDRWMSLVAAL 183 GA I+ MHYLG+ +L +P +VW DL+A S+ G+ FG +L++ R + W + A Sbjct: 121 GAAISLMHYLGIASLRMPADIVWMPDLLAVSIACGVGFGALSLSVVRRGETVWFGAIGAG 180 Query: 184 LLTLAIVSHHFTAMGAVEIVPDPLQAPAALSLSPAFLAIVIAGVALSVLGMSLVGVLADR 243 LL +AI++ HF AM A+ ++ D + LSP L++ +A V + + L+ ++DR Sbjct: 181 LLMVAILTDHFIAMSAMGLISDVTATSENVGLSPIALSVGVASVMAAFVVACLISAISDR 240 Query: 244 RLALRTRRFEEIISQLSSARQQVEASQKALEEQRFRLDTAINHMGEGLCMFNAEKRLVVC 303 R S++ + E+ +L+ AI++M +GLCMF + L + Sbjct: 241 R------------------------SRRDINERNIQLNAAIDNMRQGLCMFGPDNCLQLW 276 Query: 304 NDRYAKMYRLPPELLLPGTAHREIIRHRIANG-ILKGETSDSAAMQVLATLNALPAGEIS 362 N++Y MY++ PE + G ++ R G I+K S S+ + N++ E + Sbjct: 277 NEKYVGMYKIAPEDIRVGMTVDDMFAARKKAGTIVKDLDSYSSHL-----WNSVENREFT 331 Query: 363 SRVDELADGRLICVTRQPMPGGGWVATHRDVTEQRRSEAKITYMAQHDALTDLPNRVLLK 422 + EL DGR I V+ Q M GGWV TH D+TEQR+SEA+I Y+AQHD+LT L NR Sbjct: 332 RWILELVDGRTISVSYQSMENGGWVGTHEDITEQRKSEAQIQYLAQHDSLTGLFNRAAFN 391 Query: 423 EWMERALSGARCGGPSLAVLMLDLDRFKDVNDTLGHPAGDALLKSVAARLRRCVSDTTLV 482 E + + A S +L LD+DRF ++NDT GH AGD L A RL+ + + Sbjct: 392 EHVHKVWEEAMREQRSFTILSLDIDRFSEINDTYGHSAGDTFLDEAARRLQAACG-SAFI 450 Query: 483 ARLGGDEFAVIDHVGDPVTEAGLLAEKIRKALSEPIDLGDHRVTTTTSIGIAIAPRDGTD 542 ARLGGDEF ++ G+ AG + ++ A + H + + ++G++I P+DG D Sbjct: 451 ARLGGDEFMIVSSEGEQPARAGDICTRVLTAFEMTFHIEGHPIHSGCTVGVSIFPQDGAD 510 Query: 543 SDEVLRSADLALYSAKSCGRGSFRFFEPELDRLLQARRGLERDMRSALANGEFELHYQPF 602 + ++ +AD+ALY AK RGS RFFEP +D+ L+ +R L D+ A+ NG+ ELHYQP Sbjct: 511 VETLITNADVALYRAKKEERGSVRFFEPAMDKQLREKRALLHDLGVAIGNGQLELHYQP- 569 Query: 603 IHVASGKTCGFEALLRWHHPQRGMVSPAQFIPLAEETGLIVPLGEWVLRTACAEAAKWPD 662 G GFE L+RW HP +G+++P FIPLAEETG IV + W+LR AC EAA WP+ Sbjct: 570 QGGPDGNPFGFETLVRWRHPAKGLIAPGAFIPLAEETGSIVAIDAWILREACREAASWPN 629 Query: 663 DLKIAINLSPVQFRSPELVPVIVHALASAGISPERLELEVTETAIIQDSEAVFTALSQLH 722 L+IAIN+SP+ F+ +L +I L G++P+RLE+E+TE ++QD + L ++ Sbjct: 630 PLQIAINVSPMSFQQNDLPGLIHSILLETGLNPKRLEIEITEGVLMQDFSRACSILRRIK 689 Query: 723 DLGVRIALDDFGTGYSSLSFLQKFPFDKVKIDRSFVSELSGASDESRRIARAIVRFAVSL 782 +LGVRIA+DDFGTGYSSLS+LQ FPFDK+KID++FV+++ + +S I RAI+ +L Sbjct: 690 NLGVRIAMDDFGTGYSSLSYLQSFPFDKIKIDQTFVAQIH-KNVQSSAIIRAIISLGEAL 748 Query: 783 GKTTTAEGVETREQLDILRADACVEVQGFHFSPPVQSEKVAQMIGGRTPAAVERPA 838 AEGVET Q D L C E+QG+ P Q I GR A + A Sbjct: 749 NLGVIAEGVETEAQRDFLADAGCTEMQGYLLGRP-QPISAYNPIIGRPSVASNKKA 803 >ref|YP_004632296.1| GGDEF/EAL domain-containing protein [Oligotropha carboxidovorans OM5] gb|AEI02479.1| GGDEF/EAL domain protein [Oligotropha carboxidovorans OM4] gb|AEI06055.1| GGDEF/EAL domain protein [Oligotropha carboxidovorans OM5] Length = 804 Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust. Identities = 328/827 (39%), Positives = 484/827 (58%), Gaps = 32/827 (3%) Query: 5 MFRVLTCLSGEHDWRLVLLAGLVCFVASIVAVNIFHRAIASQARTRLIWIAIAGAAIGYG 64 M R+L CL +HDWRLVLLA VC +ASI +N++ RA A++A++RL W AG G G Sbjct: 1 MLRILNCLQTQHDWRLVLLAAGVCVLASIATINMYQRARANKAKSRLFWTLAAGLVCGCG 60 Query: 65 IWATHFIAMLAYEPGIPTGYGIVLTALSLAAAMMLTSGGLGLAAGDSSRWRAPVGGAVIG 124 +W+THFI MLAY PG+P + +T +S A A+++ + G A W + VGG ++G Sbjct: 61 VWSTHFIGMLAYSPGVPITFDFTMTMVSFAVAVVMMTAGFVAAIYGERTWSSLVGGVIVG 120 Query: 125 AGIASMHYLGMWALEVPGRVVWSLDLVAASVVLGMLFGYAALAIAVRRQDRWMSLVAALL 184 I+ MH+LG+ AL + +VW DL+ S V G++F +L + S +AA L Sbjct: 121 IAISVMHHLGIVALRMSADIVWMPDLLVLSAVCGIVFSTLSLFTVRQGTAITHSGIAAAL 180 Query: 185 LTLAIVSHHFTAMGAVEIVPDPLQAPAALSLSPAFLAIVIAGVALSVLGMSLVGVLADRR 244 L A +S H A+ A+ ++PD LSP L+I +A + ++++ L+G ++DRR Sbjct: 181 LATATLSDHIIAVSAIGLIPDINTVSDEAGLSPIVLSISVASMMVAIVIACLIGAISDRR 240 Query: 245 LALRTRRFEEIISQLSSARQQVEASQKALEEQRFRLDTAINHMGEGLCMFNAEKRLVVCN 304 S++ + E+ +L+ AI ++ +GLCMF + L + N Sbjct: 241 ------------------------SRRHMNERNIQLNAAIQNIMQGLCMFGPDNCLQLWN 276 Query: 305 DRYAKMYRLPPELLLPGTAHREIIRHRIANGILKGETSDSAAMQVLATLNALPAGEISSR 364 D+Y MYR+ PE + G E+ R G + E D + ++ +++ E + Sbjct: 277 DKYVSMYRIAPEDIRVGATVEELFAARKKAGTIVKEL-DFYSTRLW---DSVKNRESARW 332 Query: 365 VDELADGRLICVTRQPMPGGGWVATHRDVTEQRRSEAKITYMAQHDALTDLPNRVLLKEW 424 V EL DGR I V Q M GGWV TH D+TEQR+SEA+I Y+AQHD+LT L NRV + Sbjct: 333 VLELVDGRTISVAYQAMENGGWVGTHEDITEQRKSEARIQYLAQHDSLTGLFNRVAFNDH 392 Query: 425 MERALSGARCGGPSLAVLMLDLDRFKDVNDTLGHPAGDALLKSVAARLRRCVSDTTLVAR 484 + + A +L LD+DRF ++NDT GH GDA L+ A RL+ + +AR Sbjct: 393 VRKVWQKAAAQKHPFTILSLDIDRFSEINDTYGHSTGDAFLREAARRLQ-AACGSAFIAR 451 Query: 485 LGGDEFAVIDHVGDPVTEAGLLAEKIRKALSEPIDLGDHRVTTTTSIGIAIAPRDGTDSD 544 LGGDEF ++ G+ AG + ++ A ++ H + + ++G++I P+DG D + Sbjct: 452 LGGDEFMIVSSEGEQPARAGDICTRVLTAFEMMFNIDGHAIHSGCTVGVSIYPQDGEDIE 511 Query: 545 EVLRSADLALYSAKSCGRGSFRFFEPELDRLLQARRGLERDMRSALANGEFELHYQPFIH 604 ++ +A +ALY AK RGS RFFEPE+DR L+ +R + D+ L N + ELH+QP Sbjct: 512 TLISNAGVALYRAKKEERGSIRFFEPEMDRQLREKRVMLHDLDLVLENKQLELHFQPQAD 571 Query: 605 VASGKTCGFEALLRWHHPQRGMVSPAQFIPLAEETGLIVPLGEWVLRTACAEAAKWPDDL 664 G GFEAL+RW HP++G+V P F+PLAEETG IV + EW+LR AC EAA WP L Sbjct: 572 -PDGTPFGFEALVRWRHPEKGLVPPGVFVPLAEETGAIVAIDEWILRKACQEAASWPKPL 630 Query: 665 KIAINLSPVQFRSPELVPVIVHALASAGISPERLELEVTETAIIQDSEAVFTALSQLHDL 724 IAIN+SP+ F+ +L +I L G++P+RLE+E+TE ++QD + L ++ +L Sbjct: 631 SIAINVSPMSFQHNDLPGLIHSILLETGLNPKRLEIEITEGVLVQDFSRACSILRRIKNL 690 Query: 725 GVRIALDDFGTGYSSLSFLQKFPFDKVKIDRSFVSELSGASDESRRIARAIVRFAVSLGK 784 GVR+A+DDFGTGYSSLS+LQ FPFDK+KID++FV++++ + +S I RAI+ +L Sbjct: 691 GVRVAMDDFGTGYSSLSYLQSFPFDKIKIDQAFVAQIN-KNVQSSAIIRAIISLGEALNL 749 Query: 785 TTTAEGVETREQLDILRADACVEVQGFHFSPPVQSEKVAQMIGGRTP 831 AEGVET Q D L C E+QG+ P A ++ GR P Sbjct: 750 GVIAEGVETELQRDFLADAGCFEMQGYLIGRPQPIAAYAGIV-GRPP 795