BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0002.p (247 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236514.1| putative multi anti extrusion protein MatE [... 346 2e-93 ref|YP_001202534.1| putative multi anti extrusion protein (MatE)... 332 2e-89 ref|YP_575548.1| MATE efflux family protein [Nitrobacter hamburg... 317 8e-85 ref|NP_767227.1| transmembrane protein [Bradyrhizobium japonicum... 304 8e-81 ref|YP_316782.1| multi anti extrusion protein MatE [Nitrobacter ... 295 6e-78 >ref|YP_001236514.1| putative multi anti extrusion protein MatE [Bradyrhizobium sp. BTAi1] gb|ABQ32608.1| putative multi antimicrobial extrusion protein (MatE) [Bradyrhizobium sp. BTAi1] Length = 436 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 167/233 (71%), Positives = 200/233 (85%) Query: 15 RHALAFDAAFLRAMRPNGALLRIVLRLGIPTAIGMVVVSLAELVLLGLVNGFGSDATAAY 74 +H LA DAAFLR MRP+ LLRIVLRLGIP AIGM+V+SLAE+VL+GLVNGFGSDATAAY Sbjct: 204 KHPLAIDAAFLRGMRPDPKLLRIVLRLGIPAAIGMIVMSLAEMVLIGLVNGFGSDATAAY 263 Query: 75 GAVNQVIGYVQFPAISIAISVSIFGAQAIGRGDSARVGAIVRTGIEMNLALTGGLVVLGY 134 GAVNQV+GYVQFPA+SIAISVSIFGAQAIGRG ++G IVRTG+EMN+ LTGGLVVLGY Sbjct: 264 GAVNQVLGYVQFPALSIAISVSIFGAQAIGRGSPEQIGRIVRTGVEMNVVLTGGLVVLGY 323 Query: 135 LFARPLMGFFIVDNAVLALAQQLLYIVLWSMVLFGMATVFSGAMRAGGTVWMPLLLSTLA 194 LF+R LMGFFI D V+ +AQ+ L+IVLWS VLFGM+T FS AMRAGGTVWMPL +S + Sbjct: 324 LFSRTLMGFFITDPEVIEVAQRSLHIVLWSSVLFGMSTTFSAAMRAGGTVWMPLAISAFS 383 Query: 195 IAVVEVPVAILLSRASGVSGIWIAYPVTFATMFVLQMAYYALVWRKQTIKRLI 247 IA +EVP A LSR+ G+ G+W+AYP+TF M +LQM+YY LVWRK+T++R++ Sbjct: 384 IAAIEVPAATWLSRSIGLDGVWLAYPITFTAMMLLQMSYYLLVWRKRTVRRMV 436 >ref|YP_001202534.1| putative multi anti extrusion protein (MatE) [Bradyrhizobium sp. ORS 278] emb|CAL74288.1| putative multi antimicrobial extrusion protein (MatE) [Bradyrhizobium sp. ORS 278] Length = 451 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 167/247 (67%), Positives = 210/247 (85%) Query: 1 VVTLLWLHVHMLRHRHALAFDAAFLRAMRPNGALLRIVLRLGIPTAIGMVVVSLAELVLL 60 ++TL LH+++ R +H LA DAAF+R MRP+ LLR+VLRLGIP AIGM+V+SLAE+VL+ Sbjct: 205 LITLTSLHLYLRRRKHPLAIDAAFIRGMRPDPLLLRVVLRLGIPAAIGMIVMSLAEMVLI 264 Query: 61 GLVNGFGSDATAAYGAVNQVIGYVQFPAISIAISVSIFGAQAIGRGDSARVGAIVRTGIE 120 GLVNGFGSDATAAYGAVNQV+GYVQFPA+SIAISVSIFGAQAIGRG++ ++G IVRTGIE Sbjct: 265 GLVNGFGSDATAAYGAVNQVLGYVQFPALSIAISVSIFGAQAIGRGNAEQIGRIVRTGIE 324 Query: 121 MNLALTGGLVVLGYLFARPLMGFFIVDNAVLALAQQLLYIVLWSMVLFGMATVFSGAMRA 180 MN+ LTGGLV +GYLF+R LMGFFI D AV+ +AQ+ L+IVLWS VLFGM+T FS AMRA Sbjct: 325 MNVVLTGGLVAIGYLFSRTLMGFFITDPAVIEVAQRSLHIVLWSSVLFGMSTTFSAAMRA 384 Query: 181 GGTVWMPLLLSTLAIAVVEVPVAILLSRASGVSGIWIAYPVTFATMFVLQMAYYALVWRK 240 GTVWMPL +S IA++EVP A LSR G+ G+W AYP+TF+ M +LQM++Y LVWR+ Sbjct: 385 SGTVWMPLAISAFCIALIEVPAATWLSRTIGLDGVWWAYPITFSAMALLQMSFYLLVWRR 444 Query: 241 QTIKRLI 247 +T++++I Sbjct: 445 RTVQKMI 451 >ref|YP_575548.1| MATE efflux family protein [Nitrobacter hamburgensis X14] gb|ABE61088.1| MATE efflux family protein [Nitrobacter hamburgensis X14] Length = 449 Score = 317 bits (813), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 169/245 (68%), Positives = 193/245 (78%) Query: 3 TLLWLHVHMLRHRHALAFDAAFLRAMRPNGALLRIVLRLGIPTAIGMVVVSLAELVLLGL 62 TLLWL VHM R H LA DAA LRAMR + LL VLR+G+PTA+ MVV+SLAE+VLLG+ Sbjct: 205 TLLWLGVHMRRMNHPLAPDAALLRAMRLDRELLGKVLRIGVPTAVQMVVMSLAEIVLLGI 264 Query: 63 VNGFGSDATAAYGAVNQVIGYVQFPAISIAISVSIFGAQAIGRGDSARVGAIVRTGIEMN 122 VN FGSDATAAYGAVNQV+ YVQFPAISIAI+ SIF AQAIG G + R+GAIVRTGI +N Sbjct: 265 VNRFGSDATAAYGAVNQVLSYVQFPAISIAITASIFAAQAIGAGQTGRIGAIVRTGIWLN 324 Query: 123 LALTGGLVVLGYLFARPLMGFFIVDNAVLALAQQLLYIVLWSMVLFGMATVFSGAMRAGG 182 L LTGGLV LGYL +R ++G FI + VL LAQ LL+IVLWS V FGMA VFS MRA G Sbjct: 325 LLLTGGLVALGYLLSRIIIGLFITNPEVLDLAQTLLFIVLWSTVPFGMAGVFSATMRASG 384 Query: 183 TVWMPLLLSTLAIAVVEVPVAILLSRASGVSGIWIAYPVTFATMFVLQMAYYALVWRKQT 242 TV +P LLS LAI VEVPVA++LS GV G+WIAYP F TM VLQMA+Y +VWRK+ Sbjct: 385 TVLVPTLLSILAIVAVEVPVAMVLSHRIGVEGVWIAYPAAFCTMMVLQMAFYLMVWRKRE 444 Query: 243 IKRLI 247 IKRLI Sbjct: 445 IKRLI 449 >ref|NP_767227.1| transmembrane protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45852.1| blr0587 [Bradyrhizobium japonicum USDA 110] Length = 454 Score = 304 bits (778), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 157/245 (64%), Positives = 192/245 (78%) Query: 3 TLLWLHVHMLRHRHALAFDAAFLRAMRPNGALLRIVLRLGIPTAIGMVVVSLAELVLLGL 62 TL+ L +++LR +HALA DAA LR +R NGA+L VL +G+P+AIGMVV+++AELVLLGL Sbjct: 210 TLIVLALYLLRKKHALAPDAALLRHLRLNGAVLGKVLGIGLPSAIGMVVMAIAELVLLGL 269 Query: 63 VNGFGSDATAAYGAVNQVIGYVQFPAISIAISVSIFGAQAIGRGDSARVGAIVRTGIEMN 122 VNGFGSDATAAYGAVNQV+GY QF A+SI+I+VSI GAQA+G GD R+ IVRTG+ N Sbjct: 270 VNGFGSDATAAYGAVNQVMGYTQFTAMSISITVSILGAQAVGGGDRDRLDGIVRTGLAFN 329 Query: 123 LALTGGLVVLGYLFARPLMGFFIVDNAVLALAQQLLYIVLWSMVLFGMATVFSGAMRAGG 182 L LTGGLV L YL R ++G FI D AVL LA++LL I LWS V FG+ATVFSGAMRA G Sbjct: 330 LVLTGGLVALIYLAPRAVLGIFITDCAVLDLAKELLTIALWSSVPFGLATVFSGAMRAAG 389 Query: 183 TVWMPLLLSTLAIAVVEVPVAILLSRASGVSGIWIAYPVTFATMFVLQMAYYALVWRKQT 242 P+LLS AI +E+P A++LSR G+ G+W AYP+ F MFVLQM YY LVWRK+T Sbjct: 390 VALTPMLLSIFAILAIELPAAVILSRTIGLKGVWAAYPIVFCAMFVLQMGYYLLVWRKRT 449 Query: 243 IKRLI 247 I+RLI Sbjct: 450 IRRLI 454 Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 71/154 (46%) Query: 67 GSDATAAYGAVNQVIGYVQFPAISIAISVSIFGAQAIGRGDSARVGAIVRTGIEMNLALT 126 G DA AA A V+ ++ + ++ ++ A G G+ R+ +V T + + L L+ Sbjct: 46 GVDALAAVSAFFPVMFFLFAFVMGLSTGATVLIGHAFGAGEHGRIKIVVGTTLAVGLLLS 105 Query: 127 GGLVVLGYLFARPLMGFFIVDNAVLALAQQLLYIVLWSMVLFGMATVFSGAMRAGGTVWM 186 + ++G LF+RPLM +L A ++L +M L + + + +R G Sbjct: 106 ISIALVGGLFSRPLMMALATPADILDQASAYARVMLLTMPLGFVFLLMTAMIRGVGDGLT 165 Query: 187 PLLLSTLAIAVVEVPVAILLSRASGVSGIWIAYP 220 PLL L+ A+ + +L+ A G+ I P Sbjct: 166 PLLALALSTAIGLILTPMLIRGAFGLPAAGITSP 199 >ref|YP_316782.1| multi anti extrusion protein MatE [Nitrobacter winogradskyi Nb-255] gb|ABA03430.1| Multi antimicrobial extrusion protein MatE [Nitrobacter winogradskyi Nb-255] Length = 449 Score = 295 bits (754), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 164/245 (66%), Positives = 191/245 (77%) Query: 3 TLLWLHVHMLRHRHALAFDAAFLRAMRPNGALLRIVLRLGIPTAIGMVVVSLAELVLLGL 62 TLLWL +HM H LA D LRAMR + LL VLR+GIPTA+ ++ +SLAE+VLLG+ Sbjct: 205 TLLWLGLHMRWMNHPLAPDKVLLRAMRLDRELLGKVLRIGIPTAVQLMAMSLAEIVLLGI 264 Query: 63 VNGFGSDATAAYGAVNQVIGYVQFPAISIAISVSIFGAQAIGRGDSARVGAIVRTGIEMN 122 VNGFGSDATAAYGAVNQV+GY QFPAISIAI+ SIF AQAIG G+S R+GA+VRT + +N Sbjct: 265 VNGFGSDATAAYGAVNQVLGYAQFPAISIAITASIFAAQAIGAGESERIGAVVRTAMWLN 324 Query: 123 LALTGGLVVLGYLFARPLMGFFIVDNAVLALAQQLLYIVLWSMVLFGMATVFSGAMRAGG 182 L +TGGLVVLGYLF+R ++G FI VL LAQ LLYIVLWS V FGMA VF+ MRA G Sbjct: 325 LLMTGGLVVLGYLFSRTIVGLFITSPEVLELAQTLLYIVLWSTVPFGMACVFAATMRASG 384 Query: 183 TVWMPLLLSTLAIAVVEVPVAILLSRASGVSGIWIAYPVTFATMFVLQMAYYALVWRKQT 242 TV +P LLS LAI VVEVPVAI+LSR GV G+WIAYP F M LQMA+Y +VWRKQ Sbjct: 385 TVMVPTLLSILAIVVVEVPVAIVLSRQIGVEGVWIAYPAAFCAMMALQMAFYLMVWRKQE 444 Query: 243 IKRLI 247 I+RLI Sbjct: 445 IRRLI 449