BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0191.0002.p (368 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium ja... 766 0.0 ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium e... 502 e-140 ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [... 294 1e-77 emb|CBH37109.1| conserved hypothetical protein [uncultured archa... 290 2e-76 emb|CBH37231.1| conserved hypothetical protein [uncultured archa... 270 3e-70 >ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium japonicum USDA 110] dbj|BAC53497.1| bll8232 [Bradyrhizobium japonicum USDA 110] Length = 499 Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/368 (100%), Positives = 368/368 (100%) Query: 1 LRTSSRPIAHGLRPHTAVMNFIEGARAITESELQANNITQYHATNFYRDQITNSGYYDQL 60 LRTSSRPIAHGLRPHTAVMNFIEGARAITESELQANNITQYHATNFYRDQITNSGYYDQL Sbjct: 132 LRTSSRPIAHGLRPHTAVMNFIEGARAITESELQANNITQYHATNFYRDQITNSGYYDQL 191 Query: 61 KYIVEPTIAEFKSPGSLDTSGEHDNTVVPGLQHKYAQTGLLLVTDRCASYCRYCFRKRIV 120 KYIVEPTIAEFKSPGSLDTSGEHDNTVVPGLQHKYAQTGLLLVTDRCASYCRYCFRKRIV Sbjct: 192 KYIVEPTIAEFKSPGSLDTSGEHDNTVVPGLQHKYAQTGLLLVTDRCASYCRYCFRKRIV 251 Query: 121 GKDSDEIAPDFARVAQYIAGHPEMTNVLLSGGDPFVLSTAKLGKILDHLLPIPHLESIRF 180 GKDSDEIAPDFARVAQYIAGHPEMTNVLLSGGDPFVLSTAKLGKILDHLLPIPHLESIRF Sbjct: 252 GKDSDEIAPDFARVAQYIAGHPEMTNVLLSGGDPFVLSTAKLGKILDHLLPIPHLESIRF 311 Query: 181 GTKIVAFAPRRFEDPALPALFRRISEAGKTAVIVAHFDHIGEISVDAERNIRALRAQGVQ 240 GTKIVAFAPRRFEDPALPALFRRISEAGKTAVIVAHFDHIGEISVDAERNIRALRAQGVQ Sbjct: 312 GTKIVAFAPRRFEDPALPALFRRISEAGKTAVIVAHFDHIGEISVDAERNIRALRAQGVQ 371 Query: 241 FLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGRPVKGASHFQVSLRRGIEIARG 300 FLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGRPVKGASHFQVSLRRGIEIARG Sbjct: 372 FLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGRPVKGASHFQVSLRRGIEIARG 431 Query: 301 INRRLSGIQKTFKYIMSHYTGKIEVLDLGADGRVYMRYHQNKIPEELGKVFSRRHVEGAC 360 INRRLSGIQKTFKYIMSHYTGKIEVLDLGADGRVYMRYHQNKIPEELGKVFSRRHVEGAC Sbjct: 432 INRRLSGIQKTFKYIMSHYTGKIEVLDLGADGRVYMRYHQNKIPEELGKVFSRRHVEGAC 491 Query: 361 WLDDLPEG 368 WLDDLPEG Sbjct: 492 WLDDLPEG 499 >ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium etli IE4771] Length = 320 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 232/307 (75%), Positives = 272/307 (88%) Query: 28 ITESELQANNITQYHATNFYRDQITNSGYYDQLKYIVEPTIAEFKSPGSLDTSGEHDNTV 87 +++ E QAN+ITQ+ T FYRDQI SG+++QLK+IVEP++ EF+SPGSLDTSGEH+NTV Sbjct: 1 MSQGEWQANSITQHRVTRFYRDQIVKSGFFEQLKFIVEPSLKEFESPGSLDTSGEHENTV 60 Query: 88 VPGLQHKYAQTGLLLVTDRCASYCRYCFRKRIVGKDSDEIAPDFARVAQYIAGHPEMTNV 147 VPG QHKY QTGLLL TDRCASYCRYCFRKRIVG++S EIA +FA++ +YI H EMTNV Sbjct: 61 VPGFQHKYEQTGLLLATDRCASYCRYCFRKRIVGQESSEIANEFAQIVEYIGSHLEMTNV 120 Query: 148 LLSGGDPFVLSTAKLGKILDHLLPIPHLESIRFGTKIVAFAPRRFEDPALPALFRRISEA 207 L+SGGDPFVL T KL ILD+LLP HL+SIRFGTK++A+AP+RFEDP L ALF+RI EA Sbjct: 121 LISGGDPFVLRTGKLHGILDYLLPFTHLKSIRFGTKMLAYAPKRFEDPELGALFQRIHEA 180 Query: 208 GKTAVIVAHFDHIGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDPEILAATFAKCHQ 267 GKTAVIV HFDHIGEIS+DAER+I++LR+ GVQFLNQSVLLAKVNDDPEILA+TFA CHQ Sbjct: 181 GKTAVIVTHFDHIGEISLDAERSIQSLRSHGVQFLNQSVLLAKVNDDPEILASTFATCHQ 240 Query: 268 MGVRPYYLFQGRPVKGASHFQVSLRRGIEIARGINRRLSGIQKTFKYIMSHYTGKIEVLD 327 MG+ PYYLFQ RPVKGASHFQV L RG+EIA G+++RLSG+QKTFKYIMSHYTGKIE+LD Sbjct: 241 MGIHPYYLFQSRPVKGASHFQVPLDRGLEIAHGVSQRLSGVQKTFKYIMSHYTGKIELLD 300 Query: 328 LGADGRV 334 LGADG V Sbjct: 301 LGADGLV 307 >ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] gb|ADU96669.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] Length = 372 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 152/323 (47%), Positives = 202/323 (62%), Gaps = 3/323 (0%) Query: 45 NFYRDQITNSGYYDQLKYIVEPTIAEFKSPGSLDTSGEHDNTVVPGLQHKYAQTGLLLVT 104 ++Y I S D +K I+ P++ E GS DTSGE +NTV+ GLQHKY +T LLLVT Sbjct: 41 DYYARLIDWSDPNDPIKNIIFPSLDELDVSGSYDTSGEKENTVLTGLQHKYKETALLLVT 100 Query: 105 DRCASYCRYCFRKRIVGKDSDEIAPDFARVAQYIAGHPEMTNVLLSGGDPFVLSTAKLGK 164 +RCA YCR+CFRKR+VG ++E F R +YI HPE+TNVL+SGGDP VL T + Sbjct: 101 NRCAGYCRHCFRKRLVGIPTNETLKLFDRAVEYIKEHPEITNVLISGGDPLVLPTDVIEY 160 Query: 165 ILDHLLPIPHLESIRFGTKIVAFAPRR-FEDPALPALFRRISEAGKTAVIVAHFDHIGEI 223 L L IPHL+ IRFG+++ F P R +ED L +F + S + +V HF+H E+ Sbjct: 161 FLSELSKIPHLKFIRFGSRVPVFYPMRIYEDTKLLEVFSKYSTPERRVYLVTHFNHPNEV 220 Query: 224 SVDAERNIRALRAQGVQFLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGRPV-K 282 + +A + + +L GV NQ+VLL VND PE+LA + GV PYY+FQ RPV + Sbjct: 221 TKEARKAVDSLIRAGVPVSNQTVLLKGVNDTPEVLATLMKEITSAGVIPYYVFQCRPVSR 280 Query: 283 GASHFQVSLRRGIEIARGINRRLSGIQKTFKYIMSHYTGKIEVLDLGADGRVYMRYHQNK 342 +HFQV L+ G I G R L G K FKYIMSH TGKIE++ + D ++++YHQ K Sbjct: 281 VKTHFQVPLKEGYWIVEGAKRMLDGHAKRFKYIMSHKTGKIEIVGVMGD-EIFLKYHQAK 339 Query: 343 IPEELGKVFSRRHVEGACWLDDL 365 PE +GK F + A WLDDL Sbjct: 340 NPENVGKFFRMKLTPNAGWLDDL 362 >emb|CBH37109.1| conserved hypothetical protein [uncultured archaeon] Length = 366 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 157/341 (46%), Positives = 208/341 (60%), Gaps = 6/341 (1%) Query: 30 ESELQANNITQYHA---TNFYRDQITNSGYYDQLKYIVEPTIAEFKSPGSLDTSGEHDNT 86 E E Q I H T +Y I + D ++ + P+ E GS DTSGE +NT Sbjct: 26 EMEQQLQEIVAIHPMRITQYYMSLIDKNDPNDPIRRMTVPSEEELNLLGSYDTSGERENT 85 Query: 87 VVPGLQHKYAQTGLLLVTDRCASYCRYCFRKRIVGKDSDEIAPDFARVAQYIAGHPEMTN 146 ++PGLQHKYAQT L+L T+RCA+YCRYCFRKR+VG ++EI F +YI H E+ N Sbjct: 86 MMPGLQHKYAQTALILATNRCATYCRYCFRKRLVGLPTEEILQRFNDAVKYIENHEEINN 145 Query: 147 VLLSGGDPFVLSTAKLGKILDHLLPIPHLESIRFGTKI-VAFAPRRFEDPALPALFRRIS 205 VL+SGGDPFVLST + + L+ L I HL+ IRFGT++ V F R ED L L + S Sbjct: 146 VLISGGDPFVLSTGVVKEFLEKLSTISHLDFIRFGTRVPVTFPDRIIEDDELLTLLEKNS 205 Query: 206 EAGKTAVIVAHFDHIGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDPEILAATFAKC 265 + + +V F+H EI+ A + L GV NQ+VLL VNDDPE LA K Sbjct: 206 QENRRIYVVTQFNHPREITQKATDAVSRLIRSGVILDNQTVLLKGVNDDPETLAELQNKL 265 Query: 266 HQMGVRPYYLFQGRPVKGA-SHFQVSLRRGIEIARGINRRLSGIQKTFKYIMSHYTGKIE 324 +GV PYY+FQ RPVK ++FQV L +G EI ++L+G K FKYIMSH TGKIE Sbjct: 266 VSIGVNPYYVFQCRPVKRVKNNFQVPLYKGYEIVDRAKKKLNGHSKRFKYIMSHQTGKIE 325 Query: 325 VLDLGADGRVYMRYHQNKIPEELGKVFSRRHVEGACWLDDL 365 ++ + D +Y++YHQ + E+LGK F R+ + A WLD+L Sbjct: 326 IVGVMED-YIYLKYHQARATEDLGKFFKRKINKTAGWLDEL 365 >emb|CBH37231.1| conserved hypothetical protein [uncultured archaeon] Length = 366 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 151/324 (46%), Positives = 196/324 (60%), Gaps = 3/324 (0%) Query: 44 TNFYRDQITNSGYYDQLKYIVEPTIAEFKSPGSLDTSGEHDNTVVPGLQHKYAQTGLLLV 103 T +Y + + D ++ + P+ E GS DTSGE +NT++PGLQHKYAQT L+L Sbjct: 43 TRYYLSLLDENDPDDPIRKMAVPSEEELNLVGSYDTSGERENTIMPGLQHKYAQTALILA 102 Query: 104 TDRCASYCRYCFRKRIVGKDSDEIAPDFARVAQYIAGHPEMTNVLLSGGDPFVLSTAKLG 163 T++CA YCRYCFRKR+VG + EI F A+YI H E+ NVL+SGGDPF+LST L Sbjct: 103 TNKCAMYCRYCFRKRLVGLPTKEIMHRFNGAAKYIEEHEEINNVLISGGDPFILSTVVLS 162 Query: 164 KILDHLLPIPHLESIRFGTKI-VAFAPRRFEDPALPALFRRISEAGKTAVIVAHFDHIGE 222 + L+ L I HL+ IRFGT++ V F R +D L L S + +V F+H E Sbjct: 163 EFLERLSDILHLDFIRFGTRVPVTFPDRILKDDKLLTLLGNNSHENRRIYVVTQFNHPRE 222 Query: 223 ISVDAERNIRALRAQGVQFLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGRPVK 282 I+ A + L GV NQ+VLL VNDDPE LA K +GV PYYLFQ RPVK Sbjct: 223 ITAKATGAVSRLIRAGVIVDNQTVLLKGVNDDPETLAELQNKLVSIGVIPYYLFQCRPVK 282 Query: 283 GA-SHFQVSLRRGIEIARGINRRLSGIQKTFKYIMSHYTGKIEVLDLGADGRVYMRYHQN 341 S+FQV L +G EI RL+G K FKY MSH TGKIE++ + D +Y +YHQ Sbjct: 283 RVKSYFQVPLYKGYEIVEAAKERLNGHSKRFKYTMSHRTGKIEIVGV-MDDYIYFKYHQA 341 Query: 342 KIPEELGKVFSRRHVEGACWLDDL 365 +P +GK F R+ + A WLD+L Sbjct: 342 HVPANIGKFFKRKINKTAGWLDEL 365