BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0190.0030.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_770838.1| putative integrase/recombinase [Rhizobium legum... 447 e-124 ref|YP_770432.1| putative phage integrase/recombinase [Rhizobium... 447 e-123 ref|ZP_01550076.1| Integrase [Stappia aggregata IAM 12614] >gi|1... 434 e-120 ref|ZP_01550137.1| Integrase [Stappia aggregata IAM 12614] >gi|1... 430 e-118 ref|YP_420289.1| integrase [Magnetospirillum magneticum AMB-1] >... 428 e-118 >ref|YP_770838.1| putative integrase/recombinase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK11632.1| putative integrase/recombinase [Rhizobium leguminosarum bv. viciae 3841] Length = 288 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 211/286 (73%), Positives = 245/286 (85%) Query: 1 MAEISPLRRRMIEDMTVRNLSPATQQSYLNAAAKLSRYFGRSPDRLDLEDIRAFQVHLVA 60 M EISPLRRRMI+DMT+RNLSPATQ+SYL+A K SRYFGRSPDRL LED+RAFQVHLV+ Sbjct: 3 MTEISPLRRRMIDDMTIRNLSPATQRSYLHAVTKFSRYFGRSPDRLGLEDVRAFQVHLVS 62 Query: 61 TGMSWPALNQIVCALRFFYGVTLGHDTVPERIAYARKPRKLPVVLSADEVVRFLEAIPSL 120 +G+SWPALNQ VCALRFF+GVTLGH +PERIAYAR P KLP +L+ DE+VRFLEA+PSL Sbjct: 63 SGLSWPALNQTVCALRFFFGVTLGHGEIPERIAYARTPAKLPTILNGDEIVRFLEAVPSL 122 Query: 121 KSRTALTTVYAAGLRVSEVVLLKVVDIDSQRMLIRVEHGKGGKDRYVMLSPQLLRILRTY 180 ++RTALTT YAAGLR SE V LKV DID +R +IRVEHGKGGKDR VMLS QLL ILR Y Sbjct: 123 RTRTALTTAYAAGLRASEAVHLKVRDIDGERGIIRVEHGKGGKDRNVMLSAQLLAILRVY 182 Query: 181 WRLTRPKRWLFPGRDDERPLVPNVLHAACRSACAAAGLSKSVTVHTLRHTFATHLLENGA 240 WRL RP+ WLFPGRD+ +P+ VL++ACRSAC AAG+ K VTVHTLRH+FATHLLE+G Sbjct: 183 WRLARPEVWLFPGRDETKPIDVQVLYSACRSACTAAGIDKRVTVHTLRHSFATHLLESGT 242 Query: 241 DVRIIQVLLGHASLASTARYTQVATKTISNTPSPLDWLRLEVVPPG 286 D+RIIQVLLGH +L++TARYT+V+ I +T SPLD L LEVVPPG Sbjct: 243 DIRIIQVLLGHNNLSTTARYTKVSNTLIRSTTSPLDRLTLEVVPPG 288 >ref|YP_770432.1| putative phage integrase/recombinase [Rhizobium leguminosarum bv. viciae 3841] ref|YP_770444.1| putative phage integrase/recombinase [Rhizobium leguminosarum bv. viciae 3841] ref|YP_771618.1| putative integrase/recombinase protein [Rhizobium leguminosarum bv. viciae 3841] emb|CAK10376.1| putative phage integrase/recombinase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK10389.1| putative phage integrase/recombinase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK03537.1| putative integrase/recombinase protein [Rhizobium leguminosarum bv. viciae 3841] Length = 286 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 211/286 (73%), Positives = 245/286 (85%) Query: 1 MAEISPLRRRMIEDMTVRNLSPATQQSYLNAAAKLSRYFGRSPDRLDLEDIRAFQVHLVA 60 M EISPLRRRMI+DMT+RNLSPATQ+SYL+A K SRYFGRSPDRL LED+RAFQVHLV+ Sbjct: 1 MTEISPLRRRMIDDMTIRNLSPATQRSYLHAVTKFSRYFGRSPDRLGLEDVRAFQVHLVS 60 Query: 61 TGMSWPALNQIVCALRFFYGVTLGHDTVPERIAYARKPRKLPVVLSADEVVRFLEAIPSL 120 +G+SWPALNQ VCALRFF+GVTLGH +PERIAYAR P KLP +L+ DE+VRFLEA+PSL Sbjct: 61 SGLSWPALNQTVCALRFFFGVTLGHGEIPERIAYARTPAKLPTILNGDEIVRFLEAVPSL 120 Query: 121 KSRTALTTVYAAGLRVSEVVLLKVVDIDSQRMLIRVEHGKGGKDRYVMLSPQLLRILRTY 180 ++RTALTT YAAGLR SE V LKV DID +R +IRVEHGKGGKDR VMLS QLL ILR Y Sbjct: 121 RTRTALTTAYAAGLRASEAVHLKVRDIDGERGIIRVEHGKGGKDRNVMLSAQLLAILRVY 180 Query: 181 WRLTRPKRWLFPGRDDERPLVPNVLHAACRSACAAAGLSKSVTVHTLRHTFATHLLENGA 240 WRL RP+ WLFPGRD+ +P+ VL++ACRSAC AAG+ K VTVHTLRH+FATHLLE+G Sbjct: 181 WRLARPEVWLFPGRDETKPIDVQVLYSACRSACTAAGIDKRVTVHTLRHSFATHLLESGT 240 Query: 241 DVRIIQVLLGHASLASTARYTQVATKTISNTPSPLDWLRLEVVPPG 286 D+RIIQVLLGH +L++TARYT+V+ I +T SPLD L LEVVPPG Sbjct: 241 DIRIIQVLLGHNNLSTTARYTKVSNTLIRSTTSPLDRLTLEVVPPG 286 >ref|ZP_01550076.1| Integrase [Stappia aggregata IAM 12614] ref|ZP_01550753.1| Integrase [Stappia aggregata IAM 12614] ref|ZP_01551286.1| Integrase [Stappia aggregata IAM 12614] gb|EAV40141.1| Integrase [Stappia aggregata IAM 12614] gb|EAV40704.1| Integrase [Stappia aggregata IAM 12614] gb|EAV41388.1| Integrase [Stappia aggregata IAM 12614] Length = 287 Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/283 (78%), Positives = 244/283 (86%) Query: 4 ISPLRRRMIEDMTVRNLSPATQQSYLNAAAKLSRYFGRSPDRLDLEDIRAFQVHLVATGM 63 ISPLRRRMIEDMTVRNLSPATQ+SYL+A +K SRYFGRSPDRL LED+RAFQVHLVATG+ Sbjct: 5 ISPLRRRMIEDMTVRNLSPATQRSYLHAVSKFSRYFGRSPDRLGLEDVRAFQVHLVATGI 64 Query: 64 SWPALNQIVCALRFFYGVTLGHDTVPERIAYARKPRKLPVVLSADEVVRFLEAIPSLKSR 123 SWPALNQ VCALRFFYGVTLG +PERIAYAR PRKLP VLSADEVVRFLEA+PSLK+R Sbjct: 65 SWPALNQTVCALRFFYGVTLGQAEIPERIAYARAPRKLPEVLSADEVVRFLEAVPSLKTR 124 Query: 124 TALTTVYAAGLRVSEVVLLKVVDIDSQRMLIRVEHGKGGKDRYVMLSPQLLRILRTYWRL 183 TALT YAAGLRVSEVV LKV DIDSQR +IR+ HGKGGKDRYVMLS QLL ILRTYWRL Sbjct: 125 TALTAAYAAGLRVSEVVGLKVADIDSQRGVIRIRHGKGGKDRYVMLSAQLLHILRTYWRL 184 Query: 184 TRPKRWLFPGRDDERPLVPNVLHAACRSACAAAGLSKSVTVHTLRHTFATHLLENGADVR 243 RP WLFP R+ P+ VLHAACRSA AAAG+ K VTVHTLRH+FATHLLENG D+R Sbjct: 185 ARPPDWLFPRRNGSGPISITVLHAACRSARAAAGIDKRVTVHTLRHSFATHLLENGTDIR 244 Query: 244 IIQVLLGHASLASTARYTQVATKTISNTPSPLDWLRLEVVPPG 286 IIQVLLGH +L+STARYT+V+++ I T SPLD L +EVVPP Sbjct: 245 IIQVLLGHNNLSSTARYTKVSSRLIRRTQSPLDRLNIEVVPPN 287 >ref|ZP_01550137.1| Integrase [Stappia aggregata IAM 12614] gb|EAV41449.1| Integrase [Stappia aggregata IAM 12614] Length = 287 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 221/283 (78%), Positives = 243/283 (85%) Query: 4 ISPLRRRMIEDMTVRNLSPATQQSYLNAAAKLSRYFGRSPDRLDLEDIRAFQVHLVATGM 63 ISPLRRRMIEDMTVRNLSPATQ+SYL+A +K SRYFGRSPDRL LED+RAFQVHLVATG+ Sbjct: 5 ISPLRRRMIEDMTVRNLSPATQRSYLHAVSKFSRYFGRSPDRLGLEDVRAFQVHLVATGI 64 Query: 64 SWPALNQIVCALRFFYGVTLGHDTVPERIAYARKPRKLPVVLSADEVVRFLEAIPSLKSR 123 SWPALNQ VCALRFFYGVTLG +PERIAYAR PRKLP VLSADEVVRFLEA+PSLK+R Sbjct: 65 SWPALNQTVCALRFFYGVTLGQAEIPERIAYARAPRKLPEVLSADEVVRFLEAVPSLKTR 124 Query: 124 TALTTVYAAGLRVSEVVLLKVVDIDSQRMLIRVEHGKGGKDRYVMLSPQLLRILRTYWRL 183 TALT YAAGLRVSEVV LKV DIDSQR +IR+ HGKGGKDRYVMLS QLL ILRTYWRL Sbjct: 125 TALTAAYAAGLRVSEVVGLKVADIDSQRGVIRIRHGKGGKDRYVMLSAQLLHILRTYWRL 184 Query: 184 TRPKRWLFPGRDDERPLVPNVLHAACRSACAAAGLSKSVTVHTLRHTFATHLLENGADVR 243 RP WLFP R+ P+ VLHAACRSA AAAG+ K VTVHTLRH+FATHLLENG D+R Sbjct: 185 ARPPDWLFPRRNGSGPISITVLHAACRSARAAAGIDKRVTVHTLRHSFATHLLENGTDIR 244 Query: 244 IIQVLLGHASLASTARYTQVATKTISNTPSPLDWLRLEVVPPG 286 IIQVLLGH +L+STARYT+V++ + T SPLD L +EVVPP Sbjct: 245 IIQVLLGHNNLSSTARYTKVSSSSSRRTQSPLDRLNIEVVPPN 287 >ref|YP_420289.1| integrase [Magnetospirillum magneticum AMB-1] dbj|BAE49730.1| Integrase [Magnetospirillum magneticum AMB-1] Length = 285 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 209/286 (73%), Positives = 242/286 (84%), Gaps = 1/286 (0%) Query: 1 MAEISPLRRRMIEDMTVRNLSPATQQSYLNAAAKLSRYFGRSPDRLDLEDIRAFQVHLVA 60 MAE+SPLRRRMIEDMTVRNLSPATQ+SYL+A +K SR+F RSPDRLD +D+R +QVHLV+ Sbjct: 1 MAEMSPLRRRMIEDMTVRNLSPATQRSYLHAVSKFSRFFNRSPDRLDHDDVRTWQVHLVS 60 Query: 61 TGMSWPALNQIVCALRFFYGVTLGHDTVPERIAYARKPRKLPVVLSADEVVRFLEAIPSL 120 G+SW +LNQ V ALRFFYGVTL +PERI YAR+PR+LP+VLSADEVVRFLEA+PSL Sbjct: 61 QGISWASLNQFVAALRFFYGVTLRCPEIPERIVYARQPRRLPIVLSADEVVRFLEAVPSL 120 Query: 121 KSRTALTTVYAAGLRVSEVVLLKVVDIDSQRMLIRVEHGKGGKDRYVMLSPQLLRILRTY 180 K+RTALTT YA GLRVSEVV LK+ DIDS RM+IRVE GKG KDRYVMLS QLL ILRTY Sbjct: 121 KNRTALTTAYATGLRVSEVVALKLADIDSGRMVIRVEQGKGRKDRYVMLSAQLLGILRTY 180 Query: 181 WRLTRPKRWLFPGRDDERPLVPNVLHAACRSACAAAGLSKSVTVHTLRHTFATHLLENGA 240 W L RP+ WLFPGR+D +P+ P VL++ACRSAC AAG+ K VTVHTLRH+FATHLLE G Sbjct: 181 WPLARPEHWLFPGRED-KPIEPTVLNSACRSACVAAGIDKRVTVHTLRHSFATHLLEAGT 239 Query: 241 DVRIIQVLLGHASLASTARYTQVATKTISNTPSPLDWLRLEVVPPG 286 D+RIIQVLLGH +L++TARYTQV+ I+ T SPLD L L VVPP Sbjct: 240 DIRIIQVLLGHNNLSTTARYTQVSNAMIAKTTSPLDGLDLMVVPPS 285