BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0190.0017.p (335 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241703.1| hypothetical protein BBta_5854 [Bradyrhizobi... 611 e-173 ref|YP_001207258.1| iron ABC transporter [Bradyrhizobium sp. ORS... 607 e-171 ref|YP_531154.1| putative periplasmic solute-binding protein [Rh... 589 e-166 ref|NP_946824.1| putative periplasmic solute-binding protein [Rh... 556 e-156 ref|YP_001990666.1| iron ABC transporter substrate-binding prote... 555 e-156 >ref|YP_001241703.1| hypothetical protein BBta_5854 [Bradyrhizobium sp. BTAi1] gb|ABQ37797.1| hypothetical protein BBta_5854 [Bradyrhizobium sp. BTAi1] Length = 335 Score = 611 bits (1575), Expect = e-173, Method: Compositional matrix adjust. Identities = 306/335 (91%), Positives = 322/335 (96%) Query: 1 MKTVRLVLALLALMLIAPWQSARAADVICYNCPPEWADWASMLKAIKADLNYDIPHDNKN 60 MK RLVLALLAL+++AP Q A+AADVICYNCPPEWADWASMLKAIK DL YDIPHDNKN Sbjct: 1 MKVTRLVLALLALVVLAPSQQAKAADVICYNCPPEWADWASMLKAIKTDLGYDIPHDNKN 60 Query: 61 SGQALAQILAEKSNPVGDIGYFGVTFGMKAKAQNALEPYKPAHWDQVPAGLKDADGYWTT 120 SGQALAQILAEKSNPVGDIGYFGVTFGMKAKAQ+ALE YKPA+WDQVPAGLKDADGYWTT Sbjct: 61 SGQALAQILAEKSNPVGDIGYFGVTFGMKAKAQDALEAYKPANWDQVPAGLKDADGYWTT 120 Query: 121 IHSGTLGLFVNKDALGGKPVPACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG 180 IHSGTLGLFVNKDALGGKPVPACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG Sbjct: 121 IHSGTLGLFVNKDALGGKPVPACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG 180 Query: 181 SPGNFDPAISFFKELRKNDPIVPKQTSYARVVSGEMPILFDYDFNAYRAKYSEKGNFEFV 240 S NFDPA+SFFK+LRKNDPIVPKQTSYARVVSGE+PILFDYDFNAYRAKY+EKGNFEFV Sbjct: 181 SQSNFDPALSFFKDLRKNDPIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFEFV 240 Query: 241 IPCEGSVVFPYVVGLVKNAPDKEKAKKVMDYLLSDKGQAIWTNAYLRPARPIELPASVKG 300 IPCEGSVVFPYVVGLVKNAPDK+KAKKV+DYLLSDKGQAIWTNAYLRPARPIELP +VK Sbjct: 241 IPCEGSVVFPYVVGLVKNAPDKDKAKKVIDYLLSDKGQAIWTNAYLRPARPIELPEAVKT 300 Query: 301 KFLPDSDYARAKSVDWGEMENVQKAFVDRYLAEVR 335 KFLPDSDYARAKSV+WG+ME QKAFVDRYL+EVR Sbjct: 301 KFLPDSDYARAKSVNWGDMETAQKAFVDRYLSEVR 335 >ref|YP_001207258.1| iron ABC transporter [Bradyrhizobium sp. ORS 278] emb|CAL79041.1| conserved hypothetical protein; putative ABC-type Fe3+ transport system; putative exported protein [Bradyrhizobium sp. ORS 278] Length = 335 Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust. Identities = 302/335 (90%), Positives = 320/335 (95%) Query: 1 MKTVRLVLALLALMLIAPWQSARAADVICYNCPPEWADWASMLKAIKADLNYDIPHDNKN 60 MK +RLVLALLAL ++AP Q A+AADVICYNCPPEWADWASMLKAIK DL YDIPHDNKN Sbjct: 1 MKVIRLVLALLALFVLAPSQPAKAADVICYNCPPEWADWASMLKAIKTDLGYDIPHDNKN 60 Query: 61 SGQALAQILAEKSNPVGDIGYFGVTFGMKAKAQNALEPYKPAHWDQVPAGLKDADGYWTT 120 SGQALAQILAEK+NPVGDIGYFGVTFGMKAKAQ+ALEPYKP +WDQVPAGLKDADGYWTT Sbjct: 61 SGQALAQILAEKANPVGDIGYFGVTFGMKAKAQDALEPYKPVNWDQVPAGLKDADGYWTT 120 Query: 121 IHSGTLGLFVNKDALGGKPVPACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG 180 IHSGTLGLFVNKDALGGKP+PACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG Sbjct: 121 IHSGTLGLFVNKDALGGKPIPACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG 180 Query: 181 SPGNFDPAISFFKELRKNDPIVPKQTSYARVVSGEMPILFDYDFNAYRAKYSEKGNFEFV 240 S NFDPA+SF K+LR+NDPIVPKQTSYARVVSGE+PILFDYDFNAYRAKY+EKGNFEFV Sbjct: 181 SQTNFDPAVSFLKDLRRNDPIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFEFV 240 Query: 241 IPCEGSVVFPYVVGLVKNAPDKEKAKKVMDYLLSDKGQAIWTNAYLRPARPIELPASVKG 300 IPCEGSVVFPYVVGLVKNAPDK+KAKKVMDYLLSDKGQAIWTNAYLRPARPIELP +VK Sbjct: 241 IPCEGSVVFPYVVGLVKNAPDKDKAKKVMDYLLSDKGQAIWTNAYLRPARPIELPEAVKS 300 Query: 301 KFLPDSDYARAKSVDWGEMENVQKAFVDRYLAEVR 335 KFLPDSDYARAKSV+WG+ME QK FVDRYL+EVR Sbjct: 301 KFLPDSDYARAKSVNWGDMEAAQKGFVDRYLSEVR 335 >ref|YP_531154.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris BisB18] gb|ABD86835.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris BisB18] Length = 333 Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust. Identities = 289/335 (86%), Positives = 306/335 (91%), Gaps = 2/335 (0%) Query: 1 MKTVRLVLALLALMLIAPWQSARAADVICYNCPPEWADWASMLKAIKADLNYDIPHDNKN 60 MK R V AL+A+ L+ Q A+AADVICYNCPPEWADWASMLKAIK DL YDIPHDNKN Sbjct: 1 MKLSRWVFALVAVPLLL--QPAKAADVICYNCPPEWADWASMLKAIKTDLGYDIPHDNKN 58 Query: 61 SGQALAQILAEKSNPVGDIGYFGVTFGMKAKAQNALEPYKPAHWDQVPAGLKDADGYWTT 120 SGQALAQILAEK+NPVGDIGYFGVTFGMKAK Q+ALEPYKPAHWDQV AGLKD DGYWTT Sbjct: 59 SGQALAQILAEKANPVGDIGYFGVTFGMKAKTQDALEPYKPAHWDQVDAGLKDPDGYWTT 118 Query: 121 IHSGTLGLFVNKDALGGKPVPACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG 180 IHSGTLGLFVNKDALGGKPVP CWKDLLKPDYKGMVGYLDPSSAAVGYVG+VAVNLALGG Sbjct: 119 IHSGTLGLFVNKDALGGKPVPKCWKDLLKPDYKGMVGYLDPSSAAVGYVGSVAVNLALGG 178 Query: 181 SPGNFDPAISFFKELRKNDPIVPKQTSYARVVSGEMPILFDYDFNAYRAKYSEKGNFEFV 240 S +F PAI+FFK+L+KN PIVPKQTSYARVVSGE+PILFDYDFNAYRAKYSE G+FEFV Sbjct: 179 SASDFSPAINFFKDLQKNQPIVPKQTSYARVVSGEIPILFDYDFNAYRAKYSEAGHFEFV 238 Query: 241 IPCEGSVVFPYVVGLVKNAPDKEKAKKVMDYLLSDKGQAIWTNAYLRPARPIELPASVKG 300 IPCEGSVVFPYVVGLVKNAPDK+KAKKVMDYLLSDKGQAIWTNAYLRPAR I LP +VK Sbjct: 239 IPCEGSVVFPYVVGLVKNAPDKDKAKKVMDYLLSDKGQAIWTNAYLRPARKIALPEAVKA 298 Query: 301 KFLPDSDYARAKSVDWGEMENVQKAFVDRYLAEVR 335 KFLPDSDY RAKSVDWGEME QK FV+RYLA+V Sbjct: 299 KFLPDSDYDRAKSVDWGEMETAQKGFVERYLADVH 333 >ref|NP_946824.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE26918.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris CGA009] Length = 335 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 270/335 (80%), Positives = 291/335 (86%) Query: 1 MKTVRLVLALLALMLIAPWQSARAADVICYNCPPEWADWASMLKAIKADLNYDIPHDNKN 60 M+ VRL+ AL AL A Q A+AADVICYNCPP+WADWA+MLK +KADL YDIP DNKN Sbjct: 1 MRLVRLMTALCALSAFASLQPAKAADVICYNCPPQWADWATMLKQVKADLGYDIPFDNKN 60 Query: 61 SGQALAQILAEKSNPVGDIGYFGVTFGMKAKAQNALEPYKPAHWDQVPAGLKDADGYWTT 120 SGQAL+Q++AEKSNPV DIGYFGV FGMKAKAQ +PYKPA WD+VPAGLKD DG WT Sbjct: 61 SGQALSQLIAEKSNPVADIGYFGVNFGMKAKAQGVTQPYKPAKWDEVPAGLKDPDGEWTA 120 Query: 121 IHSGTLGLFVNKDALGGKPVPACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG 180 IHSGTLGLFVN DALGGKPVPACW+DL KPDYKGMVGYLDP SAAVGYVGAVAVNLALGG Sbjct: 121 IHSGTLGLFVNVDALGGKPVPACWRDLEKPDYKGMVGYLDPPSAAVGYVGAVAVNLALGG 180 Query: 181 SPGNFDPAISFFKELRKNDPIVPKQTSYARVVSGEMPILFDYDFNAYRAKYSEKGNFEFV 240 S +F PA+ FFK+L ND IVPKQTSYARVVSGE+PILFDYDFNAYRAKY+EKGNF FV Sbjct: 181 SDQDFSPAVLFFKKLHDNDAIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFAFV 240 Query: 241 IPCEGSVVFPYVVGLVKNAPDKEKAKKVMDYLLSDKGQAIWTNAYLRPARPIELPASVKG 300 IPCEGSVVFPYVV L K AP+ +KAKKVMDYLLSDKGQAIWTNAYLRPARPI LP VK Sbjct: 241 IPCEGSVVFPYVVSLTKGAPNADKAKKVMDYLLSDKGQAIWTNAYLRPARPIALPPEVKA 300 Query: 301 KFLPDSDYARAKSVDWGEMENVQKAFVDRYLAEVR 335 KFLPDSDYARAK+VDW +ME QKAF DRYLAEVR Sbjct: 301 KFLPDSDYARAKNVDWAKMEAAQKAFTDRYLAEVR 335 >ref|YP_001990666.1| iron ABC transporter substrate-binding protein [Rhodopseudomonas palustris TIE-1] gb|ACF00191.1| extracellular solute-binding protein family 1 [Rhodopseudomonas palustris TIE-1] Length = 335 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 269/335 (80%), Positives = 291/335 (86%) Query: 1 MKTVRLVLALLALMLIAPWQSARAADVICYNCPPEWADWASMLKAIKADLNYDIPHDNKN 60 M+ VRL+ AL AL A Q A+AADVICYNCPP+WADWA+MLK +KADL YDIP DNKN Sbjct: 1 MRLVRLMTALCALSAFASLQPAKAADVICYNCPPQWADWATMLKQVKADLGYDIPFDNKN 60 Query: 61 SGQALAQILAEKSNPVGDIGYFGVTFGMKAKAQNALEPYKPAHWDQVPAGLKDADGYWTT 120 SGQAL+Q++AEKSNPV DIGYFGV FGMKAKAQ +PYKPA WD+VPAGLKD DG WT Sbjct: 61 SGQALSQLIAEKSNPVADIGYFGVNFGMKAKAQGVTQPYKPAKWDEVPAGLKDPDGEWTA 120 Query: 121 IHSGTLGLFVNKDALGGKPVPACWKDLLKPDYKGMVGYLDPSSAAVGYVGAVAVNLALGG 180 IHSGTLGLFVN DALGGKPVPACW+DL KPDYKGMVGYLDP SAAVGYVGAVAVNLALGG Sbjct: 121 IHSGTLGLFVNVDALGGKPVPACWRDLEKPDYKGMVGYLDPPSAAVGYVGAVAVNLALGG 180 Query: 181 SPGNFDPAISFFKELRKNDPIVPKQTSYARVVSGEMPILFDYDFNAYRAKYSEKGNFEFV 240 S +F PA+ FFK+L N+ IVPKQTSYARVVSGE+PILFDYDFNAYRAKY+EKGNF FV Sbjct: 181 SDQDFSPAVLFFKKLHDNEAIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFAFV 240 Query: 241 IPCEGSVVFPYVVGLVKNAPDKEKAKKVMDYLLSDKGQAIWTNAYLRPARPIELPASVKG 300 IPCEGSVVFPYVV L K AP+ +KAKKVMDYLLSDKGQAIWTNAYLRPARPI LP VK Sbjct: 241 IPCEGSVVFPYVVSLTKGAPNADKAKKVMDYLLSDKGQAIWTNAYLRPARPIALPPEVKA 300 Query: 301 KFLPDSDYARAKSVDWGEMENVQKAFVDRYLAEVR 335 KFLPDSDYARAK+VDW +ME QKAF DRYLAEVR Sbjct: 301 KFLPDSDYARAKNVDWAKMEAAQKAFTDRYLAEVR 335