BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0190.0002.p         (41 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001241619.1| hypothetical protein BBta_5763 [Bradyrhizobi...    53   2e-05
ref|NP_772739.1| hypothetical protein bsl6099 [Bradyrhizobium ja...    48   4e-04
ref|YP_001207213.1| hypothetical protein BRADO5315 [Bradyrhizobi...    46   0.001

>ref|YP_001241619.1| hypothetical protein BBta_5763 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37713.1| hypothetical protein BBta_5763 [Bradyrhizobium sp. BTAi1]
          Length = 97

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 34/40 (85%)

Query: 2  ETLIEQDRVRRSEIDATVVKTIATVLTSFGFEEGDRRKLR 41
          ETL++Q +++R EIDA V++ IAT+LTSFG EE DR++LR
Sbjct: 12 ETLMKQSQLQRDEIDAVVMRAIATILTSFGIEEEDRKELR 51


>ref|NP_772739.1| hypothetical protein bsl6099 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51364.1| bsl6099 [Bradyrhizobium japonicum USDA 110]
          Length = 99

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 30/40 (75%)

Query: 2  ETLIEQDRVRRSEIDATVVKTIATVLTSFGFEEGDRRKLR 41
          ETL EQ R ++  IDA V+K +A+VL SFG E+ DR++LR
Sbjct: 14 ETLAEQHRFQQESIDAIVLKAVASVLASFGIEDDDRKELR 53


>ref|YP_001207213.1| hypothetical protein BRADO5315 [Bradyrhizobium sp. ORS 278]
 emb|CAL78996.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 99

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 30/40 (75%)

Query: 2  ETLIEQDRVRRSEIDATVVKTIATVLTSFGFEEGDRRKLR 41
          ETL  Q  ++R E+DA V++ I T+LTSFG EE DR++LR
Sbjct: 14 ETLGTQSNLQREEMDAVVMRAIVTILTSFGIEEEDRKELR 53