BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0189.0033.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001208544.1| hypothetical protein BRADO6728 [Bradyrhizobi... 436 e-120 ref|NP_767795.1| hypothetical protein bll1155 [Bradyrhizobium ja... 432 e-119 ref|YP_001236980.1| hypothetical protein BBta_0812 [Bradyrhizobi... 431 e-118 ref|YP_316803.1| Sel1 repeat-containing protein [Nitrobacter win... 400 e-109 ref|NP_946167.1| hypothetical protein RPA0814 [Rhodopseudomonas ... 395 e-108 >ref|YP_001208544.1| hypothetical protein BRADO6728 [Bradyrhizobium sp. ORS 278] emb|CAL80329.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 1161 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 240/352 (68%), Positives = 271/352 (76%), Gaps = 17/352 (4%) Query: 1 VILLSTAKMAMNLLDTSSAPQMPAIEHSEPATPPMQPPAENSAAPAPSGVPGPSVPGSSV 60 VI+L T K AM+LLDT S P P + E T +PP + +PS P P+ P S Sbjct: 803 VIVLGTFKFAMSLLDTGSTP--PPVSSMESQT---EPPRAQMPSASPSMSPRPTTPDQS- 856 Query: 61 PGPSMTSPTPLGRQSNNTPAPNTLDSAQVTIPPATVPAPAAAPEPAAVPTAAANDVTGTI 120 GPS+TSPTPL RQS N P+ ++ + P AAA A D+TGTI Sbjct: 857 -GPSLTSPTPLDRQSYNRAMPSEAETIAMLAIPQDTERQAAA---------AGGDITGTI 906 Query: 121 PTAPPLGGKLAMVQIPAGEKLPDAIGGPALRSAAIKGDAAAAYEVGVRFAEGKGVTANVD 180 PTA G +L +VQ+PA EKLPDAIGGPALR+AA+KGD AAYEVG+R AEGKGV N + Sbjct: 907 PTAAN-GQRLGLVQVPASEKLPDAIGGPALRNAALKGDPTAAYEVGIRLAEGKGVAPNYE 965 Query: 181 EAAKWYARAAQAGVVPAMFRLGTFYEKGLSVKRDFDVARRYYVQAAERGNAKAMHNLAVL 240 EAAKWY RAAQAG++PA+FRLGTFYEKGL VK+D D+ARRYYV AAERGNAKAMHNLAVL Sbjct: 966 EAAKWYDRAAQAGLIPAVFRLGTFYEKGLGVKKDADIARRYYVVAAERGNAKAMHNLAVL 1025 Query: 241 DADGGGKGADYKSAAQWFRKAADRGVADSQVNLGILYARGIGVEQNLAESFKWFSLAAAQ 300 DADGGGKGA+YKSA+QWFRKAA+RGVADSQ NLGILYARGIGVEQNLAES+KWF+LAAAQ Sbjct: 1026 DADGGGKGANYKSASQWFRKAAERGVADSQFNLGILYARGIGVEQNLAESYKWFTLAAAQ 1085 Query: 301 GDADAGHKRDDIAKRLDPQSLAAAKLAIQTFTAEPQPSDAVNVPAPAGGWDG 352 GDADAG KRDD+AKRLD QSLAAAKLAIQTFT EPQP DAVNVP PAGGWDG Sbjct: 1086 GDADAGRKRDDVAKRLDAQSLAAAKLAIQTFTVEPQPDDAVNVPTPAGGWDG 1137 >ref|NP_767795.1| hypothetical protein bll1155 [Bradyrhizobium japonicum USDA 110] dbj|BAC46420.1| bll1155 [Bradyrhizobium japonicum USDA 110] Length = 1165 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 248/361 (68%), Positives = 271/361 (75%), Gaps = 32/361 (8%) Query: 1 VILLSTAKMAMNLLDTSSAPQMP-AIEHS--EPATPPMQPPAENSAAPAPSGVPGPSVPG 57 VI+L T KMAMNLLD S P P A+E+S EPA PP E P++P Sbjct: 809 VIVLGTFKMAMNLLDGGSTPPAPQAMENSVSEPAPQASPPPVETK----------PAIPE 858 Query: 58 SSVPGPSMTSPTPLGRQSNNT----PAPNTLDSAQVTIPPATVPAPAAAPEPAAVPTAAA 113 P SMTSPTP+GRQS N P PN+ SA V IPPA AA Sbjct: 859 QVTP--SMTSPTPIGRQSQNNAAPAPTPNSGSSASVEIPPAPAAV-----------PPAA 905 Query: 114 NDVTGTIPTAPPLGGKLAMVQIPAGEKLPDAIGGPALRSAAIKGDAAAAYEVGVRFAEGK 173 +DVTG + A +L +VQ+P EKLPDAIGGP LR+AA+KGDA AAYE+ VRFAEGK Sbjct: 906 SDVTGALSGAS--RARLGLVQVPPSEKLPDAIGGPGLRTAAMKGDATAAYEIAVRFAEGK 963 Query: 174 GVTANVDEAAKWYARAAQAGVVPAMFRLGTFYEKGLSVKRDFDVARRYYVQAAERGNAKA 233 GV AN DEAAKWY RAAQAGV+PA FRLGT YEKGL VK+D D+ARRYY QAAERGNAKA Sbjct: 964 GVAANYDEAAKWYDRAAQAGVMPATFRLGTLYEKGLGVKKDADIARRYYTQAAERGNAKA 1023 Query: 234 MHNLAVLDADGGGKGADYKSAAQWFRKAADRGVADSQVNLGILYARGIGVEQNLAESFKW 293 MHNLAVLDADGGG+GA+YKSAAQWFRKAADRGVADSQ NLGILYARGIGVEQNLAES+KW Sbjct: 1024 MHNLAVLDADGGGRGANYKSAAQWFRKAADRGVADSQFNLGILYARGIGVEQNLAESYKW 1083 Query: 294 FSLAAAQGDADAGHKRDDIAKRLDPQSLAAAKLAIQTFTAEPQPSDAVNVPAPAGGWDGA 353 FSLAAAQGDADA KRDD+AKRLDPQSLAAAKLAIQTF+AEPQP DAVNVPAP GGWD A Sbjct: 1084 FSLAAAQGDADAAGKRDDVAKRLDPQSLAAAKLAIQTFSAEPQPDDAVNVPAPNGGWDSA 1143 Query: 354 P 354 P Sbjct: 1144 P 1144 >ref|YP_001236980.1| hypothetical protein BBta_0812 [Bradyrhizobium sp. BTAi1] gb|ABQ33074.1| hypothetical protein BBta_0812 [Bradyrhizobium sp. BTAi1] Length = 1160 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 243/358 (67%), Positives = 271/358 (75%), Gaps = 26/358 (7%) Query: 1 VILLSTAKMAMNLLDTSSAPQMPAIEHSEPATPPMQPPAENSAAPAPSGVPG----PSVP 56 VI+L T K AM+LLD+ S P P PM+ E A PS P P+ P Sbjct: 801 VIVLGTFKFAMSLLDSGSTP---------PPITPMESQGEAPRAQMPSATPSLSPRPATP 851 Query: 57 GSSVPGPSMTSPTPLGRQSNNTPAPNTLDS-AQVTIPPATVPAPAAAPEPAAVPTAAAND 115 SVP S+TSPTP+ RQS N P ++ A + IP T AAA P D Sbjct: 852 DQSVP--SLTSPTPMDRQSYNRSMPTEAETIAMLAIPQDTDKQAAAAAAP---------D 900 Query: 116 VTGTIPTAPPLGGKLAMVQIPAGEKLPDAIGGPALRSAAIKGDAAAAYEVGVRFAEGKGV 175 VTGT+PTA G KL +VQ+P EKLPD IGG ALR++A+KGD AAYEVGVRFAEGKG+ Sbjct: 901 VTGTVPTAAN-GQKLGLVQVPTSEKLPDGIGGLALRNSALKGDPTAAYEVGVRFAEGKGI 959 Query: 176 TANVDEAAKWYARAAQAGVVPAMFRLGTFYEKGLSVKRDFDVARRYYVQAAERGNAKAMH 235 AN +EAAKWY RAAQAG++PA+FRLGTFYEKGL VK+D D+ARRYYV AAERGNAKAMH Sbjct: 960 AANYEEAAKWYDRAAQAGLIPAVFRLGTFYEKGLGVKKDADIARRYYVVAAERGNAKAMH 1019 Query: 236 NLAVLDADGGGKGADYKSAAQWFRKAADRGVADSQVNLGILYARGIGVEQNLAESFKWFS 295 NLAVLDADGGGKGA+YKSA+QWFRKAA+RGVADSQ NLGILYARGIGVEQNLAES+KWFS Sbjct: 1020 NLAVLDADGGGKGANYKSASQWFRKAAERGVADSQYNLGILYARGIGVEQNLAESYKWFS 1079 Query: 296 LAAAQGDADAGHKRDDIAKRLDPQSLAAAKLAIQTFTAEPQPSDAVNVPAPAGGWDGA 353 LAAAQGDADAG KRDD+AKRLD QSLAAAKLAIQTFT EPQP DAVNVPAPAGGWDGA Sbjct: 1080 LAAAQGDADAGRKRDDVAKRLDAQSLAAAKLAIQTFTVEPQPDDAVNVPAPAGGWDGA 1137 >ref|YP_316803.1| Sel1 repeat-containing protein [Nitrobacter winogradskyi Nb-255] gb|ABA03451.1| sel1-like repeat protein [Nitrobacter winogradskyi Nb-255] Length = 1059 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 218/351 (62%), Positives = 252/351 (71%), Gaps = 26/351 (7%) Query: 1 VILLSTAKMAMNLLDTSSAPQMPAIEHSEPATPPMQPPAENSAAPAPSGVPGPSVPGSSV 60 VI+LS+ K AM LLD+S + +H+ P T +PPA+ P G GP +P Sbjct: 707 VIVLSSFKFAMTLLDSSPRATLSESDHAAPVT---KPPAD------PEGSAGPEIPQP-- 755 Query: 61 PGPSMTSPTPLGRQSNNTPAPNTLDSAQVTIPPATVPAPAAAPEPAAVPTAAANDVTGTI 120 PSM +PTP+ RQS AP DSA PA P+ A PA+ P + DVTG I Sbjct: 756 --PSMIAPTPIDRQS--MIAPPAGDSA----APAKNPSDAM---PASRPDTPSADVTGAI 804 Query: 121 PTAPPLGGKLAMVQIPAGEKLPDAIGGPALRSAAIKGDAAAAYEVGVRFAEGKGVTANVD 180 P G P LPD+IGG LRSAA++GD AA++EVGVR+AEGKGVT N D Sbjct: 805 PN----GLTPEPAATPPAASLPDSIGGTTLRSAALQGDPAASFEVGVRYAEGKGVTVNYD 860 Query: 181 EAAKWYARAAQAGVVPAMFRLGTFYEKGLSVKRDFDVARRYYVQAAERGNAKAMHNLAVL 240 EAAKWY RAA AG+VPAMFRLG +EKGL +D D ARRYY+QAA+RGNAKAMHNLAVL Sbjct: 861 EAAKWYERAAHAGIVPAMFRLGALHEKGLGTSKDVDTARRYYLQAADRGNAKAMHNLAVL 920 Query: 241 DADGGGKGADYKSAAQWFRKAADRGVADSQVNLGILYARGIGVEQNLAESFKWFSLAAAQ 300 DADGGGKGADY SAAQWF KAA+RG+ADSQ NLGILYARGIGVEQNLA+S+KWFSLAAAQ Sbjct: 921 DADGGGKGADYVSAAQWFSKAAERGIADSQYNLGILYARGIGVEQNLAKSYKWFSLAAAQ 980 Query: 301 GDADAGHKRDDIAKRLDPQSLAAAKLAIQTFTAEPQPSDAVNVPAPAGGWD 351 GD D+G KRD++AKRLDP SLAAAKLA+QTF PQPSDAV+VP PAGGWD Sbjct: 981 GDVDSGRKRDEVAKRLDPPSLAAAKLAVQTFVVTPQPSDAVSVPGPAGGWD 1031 >ref|NP_946167.1| hypothetical protein RPA0814 [Rhodopseudomonas palustris CGA009] emb|CAE26258.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 1131 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 219/361 (60%), Positives = 248/361 (68%), Gaps = 35/361 (9%) Query: 1 VILLSTAKMAMNLLDTSSAPQMPAIEHSEPATPPMQPPAENSAAPAPSGVPGPSVP---- 56 VI+LS+ +MAM L D+ AP + ++ P + P + PA P+ P Sbjct: 790 VIVLSSFQMAMKLFDSGEAPPVASV-----TAPKLSPAPDKQRLPADERQSDPTEPTAPP 844 Query: 57 --GSSVPGPSMTSPTPLGRQSNNTPAPNTLDSAQVTIPPATVPAPAAAPEPAAVPTAAAN 114 P PSM SPTP+ RQS TP PP T PA A + Sbjct: 845 SVAPVAPPPSMISPTPVERQSLYTPPA----------PPQTEPA-------------APS 881 Query: 115 DVTGTIPTAPPLG-GKLAMVQIPAGEKLPDAIGGPALRSAAIKGDAAAAYEVGVRFAEGK 173 D+TGTIP+ P K V IP+ E+LPD IGG LR+ A+KGDAAAAYEV R+AEGK Sbjct: 882 DITGTIPSQPSAAPEKFGTVAIPSAERLPDTIGGATLRTLALKGDAAAAYEVATRYAEGK 941 Query: 174 GVTANVDEAAKWYARAAQAGVVPAMFRLGTFYEKGLSVKRDFDVARRYYVQAAERGNAKA 233 GV N DEAAKWY RAA AGV PA+FR+GT YEKGL VKRD DVAR Y AA+RGNAKA Sbjct: 942 GVPVNYDEAAKWYQRAADAGVTPAIFRIGTLYEKGLGVKRDLDVARTLYSTAADRGNAKA 1001 Query: 234 MHNLAVLDADGGGKGADYKSAAQWFRKAADRGVADSQVNLGILYARGIGVEQNLAESFKW 293 MHNLAVL ADGG KGA+YK+AA WFRKAA+RGVADSQ NLGILYARGIGV+QNLAES+KW Sbjct: 1002 MHNLAVLYADGGSKGANYKTAAAWFRKAAERGVADSQFNLGILYARGIGVDQNLAESYKW 1061 Query: 294 FSLAAAQGDADAGHKRDDIAKRLDPQSLAAAKLAIQTFTAEPQPSDAVNVPAPAGGWDGA 353 FSLAAAQGD DAG KR+D+AKRLDPQSLAAAKLAIQTFTAEPQP AV V APAGGWDG Sbjct: 1062 FSLAAAQGDEDAGRKREDVAKRLDPQSLAAAKLAIQTFTAEPQPDAAVKVAAPAGGWDGQ 1121 Query: 354 P 354 P Sbjct: 1122 P 1122