BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0189.0029.p (870 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07025390.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS... 1587 0.0 ref|YP_002287785.1| ATP-dependent chaperone ClpB [Oligotropha ca... 1587 0.0 ref|YP_002540916.1| ATP-dependent Clp protease [Agrobacterium ra... 1562 0.0 ref|YP_487846.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2] ... 1527 0.0 ref|NP_949769.1| endopeptidase Clp ATP-binding subunit B [Rhodop... 1526 0.0 >ref|ZP_07025390.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS2] gb|EFI52532.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS2] Length = 877 Score = 1587 bits (4110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 779/865 (90%), Positives = 826/865 (95%) Query: 1 MNIEKYTDRVRGFIQSAQSLAMREGHQQFSTLHILKVLLDDNEGLAAGLIDRAGGNSRAI 60 MN+EKYTDRV+GFIQSAQSLA+REGHQQFS LHILKVLLDD EGLA GLIDRAGGNSRAI Sbjct: 1 MNVEKYTDRVKGFIQSAQSLALREGHQQFSPLHILKVLLDDPEGLAGGLIDRAGGNSRAI 60 Query: 61 LKATEDALAKVPKVSGAGSGQIYLAPETARAFAAAEQAADKAGDSFVSVERLLQALAADK 120 L+ATE ALAK+PKVSG G+GQIYLAPETARAF AAEQAA+KAGDSFV+VERLL AL DK Sbjct: 61 LQATEQALAKLPKVSGGGAGQIYLAPETARAFTAAEQAAEKAGDSFVTVERLLLALTLDK 120 Query: 121 DSEAGRLLAKGGVNPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAARDGKLD 180 DSEAG LLAKGGV PQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAAR+GKLD Sbjct: 121 DSEAGNLLAKGGVTPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAAREGKLD 180 Query: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLQDKALL 240 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRI+NGDVPESL+DK LL Sbjct: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL 240 Query: 241 ALDLGALIAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKGDGAMDASNL 300 +LDLGA++AGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGK DGAMDASNL Sbjct: 241 SLDLGAMVAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKADGAMDASNL 300 Query: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKDKYE 360 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLK+KYE Sbjct: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKEKYE 360 Query: 361 QHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRE 420 HHG+RIADSALVAAATLSNRYITDRFLPDKAIDL+DEAAARLKMQVDSKPEELDSLDRE Sbjct: 361 LHHGIRIADSALVAAATLSNRYITDRFLPDKAIDLVDEAAARLKMQVDSKPEELDSLDRE 420 Query: 421 IIRLKIEQEALKKETDLGSKSRLQTLEKDLVDLEKKSADMTSKWRSEKSKLSDAQKMKGE 480 IIRLKIEQEALKKETD GSKSRLQTLE DLVDLEKKSAD+TSKW++EKSKLSDAQK+K E Sbjct: 421 IIRLKIEQEALKKETDAGSKSRLQTLEGDLVDLEKKSADLTSKWQAEKSKLSDAQKLKSE 480 Query: 481 LEQLRTELANAQRKGEFQKAGELAYGRIPELEKKLAAVEASETSSASETVTADNIAQVVS 540 LEQLRTELANAQRKGE+Q+AGELAYGRIP+LEK+LAAVE +E S E VTAD+IAQVVS Sbjct: 481 LEQLRTELANAQRKGEYQRAGELAYGRIPDLEKRLAAVEVTEDPSIDEAVTADSIAQVVS 540 Query: 541 RWTGVPVDKMLEGEKDKLLRMEEMLGKRVVGQAEAVRAVSTAVRRARAGLQDPNRPIGSF 600 RWTGVPVDKMLEGEKDKLLRME+MLGKRV+GQA+AVRAVSTAVRRARAGLQDPNRPIGSF Sbjct: 541 RWTGVPVDKMLEGEKDKLLRMEDMLGKRVIGQAQAVRAVSTAVRRARAGLQDPNRPIGSF 600 Query: 601 MFLGPTGVGKTELAKALAEYLFDDETAMIRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGA 660 MFLGPTGVGKTEL KALAEYLFDDETA++R+DMSEYMEKHSV+RLIGAPPGYVGYDEGGA Sbjct: 601 MFLGPTGVGKTELTKALAEYLFDDETALVRMDMSEYMEKHSVARLIGAPPGYVGYDEGGA 660 Query: 661 LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIG 720 LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIG Sbjct: 661 LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIG 720 Query: 721 AEYLVNQPEGQSTSAVREQVMNMVRAHFRPEFLNRIDEIILFHRLQKSDMGRIVEIQFSR 780 AE+LVNQPEG+ T AVR+QVM MVR HFRPEFLNRIDEIILFHRLQKS+MG+IVEIQF+R Sbjct: 721 AEFLVNQPEGEDTGAVRDQVMGMVRTHFRPEFLNRIDEIILFHRLQKSEMGKIVEIQFNR 780 Query: 781 LRRLLEDRKIELELDPKARDWLADKGWDPAYGARPLKRVIQRSVQDPLAEMILSGDVRDG 840 LR LLEDRKI+L LD K RDWLA+KGWDPAYGARPLKRVIQRSVQDPLAEMIL+GDVRDG Sbjct: 781 LRGLLEDRKIDLVLDAKGRDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILAGDVRDG 840 Query: 841 SEVKLSATKAGLTFNGKKPENAAAD 865 + VK+SA K+GLTFNGK A+D Sbjct: 841 ATVKISAGKSGLTFNGKAVGEDASD 865 >ref|YP_002287785.1| ATP-dependent chaperone ClpB [Oligotropha carboxidovorans OM5] ref|YP_004634092.1| chaperone protein ClpB [Oligotropha carboxidovorans OM5] gb|ACI91920.1| ATP-dependent chaperone ClpB [Oligotropha carboxidovorans OM5] gb|AEI04221.1| chaperone protein ClpB [Oligotropha carboxidovorans OM4] gb|AEI07851.1| chaperone protein ClpB [Oligotropha carboxidovorans OM5] Length = 877 Score = 1587 bits (4110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 779/867 (89%), Positives = 830/867 (95%), Gaps = 2/867 (0%) Query: 1 MNIEKYTDRVRGFIQSAQSLAMREGHQQFSTLHILKVLLDDNEGLAAGLIDRAGGNSRAI 60 MNIEKYTDRV+GFIQSAQSLA+REGHQQFS LHILKVLLDD+EGL+ GLIDRAGGNSRAI Sbjct: 1 MNIEKYTDRVKGFIQSAQSLALREGHQQFSPLHILKVLLDDSEGLSGGLIDRAGGNSRAI 60 Query: 61 LKATEDALAKVPKVSGAGSGQIYLAPETARAFAAAEQAADKAGDSFVSVERLLQALAADK 120 L+ATE ALAK+PKVSG G+GQIYLAPETARAF+AAEQAA+KAGDSFV+VERLL AL+ DK Sbjct: 61 LQATEQALAKLPKVSGGGAGQIYLAPETARAFSAAEQAAEKAGDSFVTVERLLLALSLDK 120 Query: 121 DSEAGRLLAKGGVNPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAARDGKLD 180 +SEAG+LLA+GGV PQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAARDGKLD Sbjct: 121 ESEAGKLLAQGGVTPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAARDGKLD 180 Query: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLQDKALL 240 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRI+NGDVPESL+DK LL Sbjct: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL 240 Query: 241 ALDLGALIAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKGDGAMDASNL 300 ALDLGALIAGAKYRGEFEERLKAVLQEVT+AEGGI+LFIDEMHTLIGAGK DGAMDASNL Sbjct: 241 ALDLGALIAGAKYRGEFEERLKAVLQEVTAAEGGIVLFIDEMHTLIGAGKADGAMDASNL 300 Query: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKDKYE 360 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDT+SILRGLK+KYE Sbjct: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYE 360 Query: 361 QHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRE 420 HHGVRIADSALVAAATLSNRYITDRFLPDKAIDL+DEAAARLKMQ+DSKPEELDSLDRE Sbjct: 361 LHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLVDEAAARLKMQIDSKPEELDSLDRE 420 Query: 421 IIRLKIEQEALKKETDLGSKSRLQTLEKDLVDLEKKSADMTSKWRSEKSKLSDAQKMKGE 480 I+RLKIEQEALKKETD GSKSRLQTLE DL +LEKKSAD+TSKW+SEKSKLSDAQK+K E Sbjct: 421 IVRLKIEQEALKKETDAGSKSRLQTLETDLAELEKKSADLTSKWQSEKSKLSDAQKLKSE 480 Query: 481 LEQLRTELANAQRKGEFQKAGELAYGRIPELEKKLAAVEASE-TSSASETVTADNIAQVV 539 LEQ RTELANAQRKGE+Q+AGELAYGRIPELEKKLAAVEASE TS+ E VTADNIAQVV Sbjct: 481 LEQARTELANAQRKGEYQRAGELAYGRIPELEKKLAAVEASESTSTIDEAVTADNIAQVV 540 Query: 540 SRWTGVPVDKMLEGEKDKLLRMEEMLGKRVVGQAEAVRAVSTAVRRARAGLQDPNRPIGS 599 SRWTGVPVDKMLEGEKDKLLRMEEMLG+RV+GQA+AVRAVSTAVRRARAGLQDPNRPIGS Sbjct: 541 SRWTGVPVDKMLEGEKDKLLRMEEMLGQRVIGQAQAVRAVSTAVRRARAGLQDPNRPIGS 600 Query: 600 FMFLGPTGVGKTELAKALAEYLFDDETAMIRLDMSEYMEKHSVSRLIGAPPGYVGYDEGG 659 FMFLGPTGVGKTEL KALAEYLFDDETA++R+DMSEYMEKHSV+RLIGAPPGYVGYDEGG Sbjct: 601 FMFLGPTGVGKTELTKALAEYLFDDETALVRMDMSEYMEKHSVARLIGAPPGYVGYDEGG 660 Query: 660 ALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNI 719 ALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNI Sbjct: 661 ALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNI 720 Query: 720 GAEYLVNQPEGQSTSAVREQVMNMVRAHFRPEFLNRIDEIILFHRLQKSDMGRIVEIQFS 779 GAE+LVNQPEG+ T AVR+QVM MVR HFRPEFLNRIDEIILFHRLQKS+MGRIV+IQ + Sbjct: 721 GAEFLVNQPEGEDTGAVRDQVMGMVRTHFRPEFLNRIDEIILFHRLQKSEMGRIVDIQLN 780 Query: 780 RLRRLLEDRKIELELDPKARDWLADKGWDPAYGARPLKRVIQRSVQDPLAEMILSGDVRD 839 RLR+LLEDRKIEL LD KARDWLA+KGWDPAYGARPLKRVIQRSVQD LAEM+L+G+V D Sbjct: 781 RLRKLLEDRKIELHLDAKARDWLAEKGWDPAYGARPLKRVIQRSVQDSLAEMVLAGEVLD 840 Query: 840 GSEVKLSATKAGLTFNGKKPENAAADE 866 G+ VK+SA K GLTFNG KP + DE Sbjct: 841 GATVKISAGKTGLTFNG-KPASRIEDE 866 >ref|YP_002540916.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84] gb|ACM29320.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84] Length = 870 Score = 1562 bits (4044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 768/870 (88%), Positives = 813/870 (93%) Query: 1 MNIEKYTDRVRGFIQSAQSLAMREGHQQFSTLHILKVLLDDNEGLAAGLIDRAGGNSRAI 60 MN EKYTDR RGFIQSAQSLA REG+QQF+ LHILKVLLDD+EGLA GLIDR+GGNSRAI Sbjct: 1 MNAEKYTDRARGFIQSAQSLATREGNQQFTPLHILKVLLDDSEGLAGGLIDRSGGNSRAI 60 Query: 61 LKATEDALAKVPKVSGAGSGQIYLAPETARAFAAAEQAADKAGDSFVSVERLLQALAADK 120 L +TEDAL K+PKV+GAG+GQ+YLAPETAR F AAEQAA+KAGDSFV+VERLLQAL ADK Sbjct: 61 LSSTEDALVKLPKVTGAGAGQVYLAPETARLFTAAEQAAEKAGDSFVTVERLLQALVADK 120 Query: 121 DSEAGRLLAKGGVNPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAARDGKLD 180 EAG+LLA+GGVNPQ LNAAINALRKGRTADSASAENAYDALKKYARDLTQAARD KLD Sbjct: 121 HGEAGKLLAQGGVNPQQLNAAINALRKGRTADSASAENAYDALKKYARDLTQAARDSKLD 180 Query: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLQDKALL 240 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESL+DK LL Sbjct: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLL 240 Query: 241 ALDLGALIAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKGDGAMDASNL 300 ALDLGALIAGAKYRGEFEERLKAVLQEVTSA GGIILFIDEMHTLIGAGK DGAMDASNL Sbjct: 241 ALDLGALIAGAKYRGEFEERLKAVLQEVTSAAGGIILFIDEMHTLIGAGKTDGAMDASNL 300 Query: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKDKYE 360 LKPALARGELHC+GATTLDEYRKHVEKD ALARRFQPVFV EPTVEDTISILRGLK+KYE Sbjct: 301 LKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVPEPTVEDTISILRGLKEKYE 360 Query: 361 QHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRE 420 HHG+RIADSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRE Sbjct: 361 LHHGIRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRE 420 Query: 421 IIRLKIEQEALKKETDLGSKSRLQTLEKDLVDLEKKSADMTSKWRSEKSKLSDAQKMKGE 480 IIR KIEQEALKKE D GSKSRL+TL ++L LEK SAD+TSKW+SEK KLSDAQKM+ E Sbjct: 421 IIRRKIEQEALKKEADAGSKSRLKTLGEELTRLEKASADLTSKWQSEKGKLSDAQKMRSE 480 Query: 481 LEQLRTELANAQRKGEFQKAGELAYGRIPELEKKLAAVEASETSSASETVTADNIAQVVS 540 LEQ RTELANAQR GE+Q+AGELAY IPELEKKLAAVEASE SS +ETVTADNIAQVVS Sbjct: 481 LEQFRTELANAQRSGEYQRAGELAYSTIPELEKKLAAVEASENSSITETVTADNIAQVVS 540 Query: 541 RWTGVPVDKMLEGEKDKLLRMEEMLGKRVVGQAEAVRAVSTAVRRARAGLQDPNRPIGSF 600 RWTGVPVDKMLEGEKDKLL MEEMLGKRVVGQA+AVRAVSTAVRRARAGLQDP+RPIGSF Sbjct: 541 RWTGVPVDKMLEGEKDKLLHMEEMLGKRVVGQAQAVRAVSTAVRRARAGLQDPSRPIGSF 600 Query: 601 MFLGPTGVGKTELAKALAEYLFDDETAMIRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGA 660 MFLGPTGVGKTELAKALAE++FDDETAM+R+DMSE+MEKHSV+RLIGAPPGYVGYDEGG Sbjct: 601 MFLGPTGVGKTELAKALAEFMFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGV 660 Query: 661 LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIG 720 LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIG Sbjct: 661 LTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIG 720 Query: 721 AEYLVNQPEGQSTSAVREQVMNMVRAHFRPEFLNRIDEIILFHRLQKSDMGRIVEIQFSR 780 AEYLVNQPEG+ TS VR +VM MVRAH RPEFLNRID IILFHRLQKS+MG+IVEIQF+R Sbjct: 721 AEYLVNQPEGEKTSMVRGEVMTMVRAHLRPEFLNRIDAIILFHRLQKSEMGQIVEIQFAR 780 Query: 781 LRRLLEDRKIELELDPKARDWLADKGWDPAYGARPLKRVIQRSVQDPLAEMILSGDVRDG 840 LR++L+DRKIEL LD K R WLADKGWDPAYGARPLKRVIQR VQDPLAEMIL+GDVRDG Sbjct: 781 LRKILDDRKIELTLDAKGRTWLADKGWDPAYGARPLKRVIQRYVQDPLAEMILAGDVRDG 840 Query: 841 SEVKLSATKAGLTFNGKKPENAAADEFEPV 870 S VKLSA K GLTFNGKKP D+F+ V Sbjct: 841 STVKLSAGKDGLTFNGKKPVMVEEDDFDLV 870 >ref|YP_487846.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2] gb|ABD08935.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2] Length = 879 Score = 1527 bits (3953), Expect = 0.0, Method: Compositional matrix adjust. Identities = 747/869 (85%), Positives = 809/869 (93%), Gaps = 2/869 (0%) Query: 1 MNIEKYTDRVRGFIQSAQSLAMREGHQQFSTLHILKVLLDDNEGLAAGLIDRAGGNSRAI 60 MN EKYT+RVRGF+QSAQSLA+REGHQQFS LHILKVLLDD+EGLA GLIDR+GGNSRAI Sbjct: 1 MNPEKYTERVRGFVQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRSGGNSRAI 60 Query: 61 LKATEDALAKVPKVSGAGSGQIYLAPETARAFAAAEQAADKAGDSFVSVERLLQALAADK 120 LKATEDAL K+PKVSG+G+GQ+YLAP TARA AEQAA+KAGDSFV+VERLL AL+ DK Sbjct: 61 LKATEDALGKMPKVSGSGAGQVYLAPATARALDGAEQAAEKAGDSFVTVERLLLALSLDK 120 Query: 121 DSEAGRLLAKGGVNPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAARDGKLD 180 DSEAG+LLAKGGV PQNLNAAINALRKGRTADSA+AENAYDALKKYARDLTQAARDGKLD Sbjct: 121 DSEAGQLLAKGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAARDGKLD 180 Query: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLQDKALL 240 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRI+NGDVPESL+DK LL Sbjct: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL 240 Query: 241 ALDLGALIAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKGDGAMDASNL 300 ALD+GALIAGAKYRGEFEERLKAVL EVT+A GGI+LFIDEMHTL+GAGK DGAMDASNL Sbjct: 241 ALDMGALIAGAKYRGEFEERLKAVLNEVTAAAGGIVLFIDEMHTLVGAGKADGAMDASNL 300 Query: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKDKYE 360 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKDKYE Sbjct: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKDKYE 360 Query: 361 QHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRE 420 QHHGVRIADSALVAA TLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS+DRE Sbjct: 361 QHHGVRIADSALVAATTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDRE 420 Query: 421 IIRLKIEQEALKKETDLGSKSRLQTLEKDLVDLEKKSADMTSKWRSEKSKLSDAQKMKGE 480 I+RLKIEQEALKKE+D GSKSRL TLEK+L DLE+KSA +T +W +EK+KLSDAQK+K E Sbjct: 421 IVRLKIEQEALKKESDAGSKSRLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSE 480 Query: 481 LEQLRTELANAQRKGEFQKAGELAYGRIPELEKKLAAVEASETSS--ASETVTADNIAQV 538 L+ LR ELA+AQR+GE+Q+AGELAYGRIPELEK+LA +EA+E + E VTAD+IAQV Sbjct: 481 LDGLRLELADAQRRGEYQRAGELAYGRIPELEKRLADIEANENAGEMMEEAVTADHIAQV 540 Query: 539 VSRWTGVPVDKMLEGEKDKLLRMEEMLGKRVVGQAEAVRAVSTAVRRARAGLQDPNRPIG 598 VSRWTGVPVDKMLEGEK+KLLRMEE +GKRVVGQ EAV AVSTAVRRARAGLQDPNRP+G Sbjct: 541 VSRWTGVPVDKMLEGEKEKLLRMEEQIGKRVVGQFEAVHAVSTAVRRARAGLQDPNRPMG 600 Query: 599 SFMFLGPTGVGKTELAKALAEYLFDDETAMIRLDMSEYMEKHSVSRLIGAPPGYVGYDEG 658 SFMFLGPTGVGKTEL KALA+YLFDDETAM+RLDMSEYMEKHSV+RLIGAPPGYVGYDEG Sbjct: 601 SFMFLGPTGVGKTELTKALAQYLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYDEG 660 Query: 659 GALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN 718 GALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI+MTSN Sbjct: 661 GALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSN 720 Query: 719 IGAEYLVNQPEGQSTSAVREQVMNMVRAHFRPEFLNRIDEIILFHRLQKSDMGRIVEIQF 778 +G+EYLVNQPEG+ T VREQVM+MVRAHFRPEFLNR+DEIILFHRLQK++MGRIV+IQF Sbjct: 721 LGSEYLVNQPEGEDTGVVREQVMDMVRAHFRPEFLNRVDEIILFHRLQKNEMGRIVDIQF 780 Query: 779 SRLRRLLEDRKIELELDPKARDWLADKGWDPAYGARPLKRVIQRSVQDPLAEMILSGDVR 838 SRL +LLEDRKI L+LDP ARDWLA+KGWDPAYGARPLKRVIQR VQDPLAEMIL G V Sbjct: 781 SRLAKLLEDRKIVLDLDPAARDWLAEKGWDPAYGARPLKRVIQRHVQDPLAEMILDGTVS 840 Query: 839 DGSEVKLSATKAGLTFNGKKPENAAADEF 867 DG++V +S LTFNG P A + F Sbjct: 841 DGAKVAISTEGGVLTFNGAPPHTADVEPF 869 >ref|NP_949769.1| endopeptidase Clp ATP-binding subunit B [Rhodopseudomonas palustris CGA009] ref|YP_001993885.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris TIE-1] sp|Q6N1H2.1|CLPB_RHOPA RecName: Full=Chaperone protein ClpB emb|CAE29874.1| endopeptidase Clp: ATP-binding subunit B, clpB [Rhodopseudomonas palustris CGA009] gb|ACF03410.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris TIE-1] Length = 879 Score = 1526 bits (3950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 752/869 (86%), Positives = 813/869 (93%), Gaps = 2/869 (0%) Query: 1 MNIEKYTDRVRGFIQSAQSLAMREGHQQFSTLHILKVLLDDNEGLAAGLIDRAGGNSRAI 60 MN+EKYT+RVRGFIQSAQSLAMREGHQQFS LHILKVLLDD+EGLA GLIDRAGGNSRAI Sbjct: 1 MNVEKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAI 60 Query: 61 LKATEDALAKVPKVSGAGSGQIYLAPETARAFAAAEQAADKAGDSFVSVERLLQALAADK 120 LKATE+AL K+PKVSG+G+GQ+YLAP TARAF AAE+AA+KAGDSFV+VERLL AL+ DK Sbjct: 61 LKATEEALGKMPKVSGSGAGQVYLAPATARAFDAAEKAAEKAGDSFVTVERLLLALSLDK 120 Query: 121 DSEAGRLLAKGGVNPQNLNAAINALRKGRTADSASAENAYDALKKYARDLTQAARDGKLD 180 DSEAG+LL KGGV PQNLNAAINALRKGRTADSA+AENAYDALKKYARDLTQAARDGKLD Sbjct: 121 DSEAGQLLTKGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAARDGKLD 180 Query: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLQDKALL 240 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRI+NGDVPESL+DK LL Sbjct: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL 240 Query: 241 ALDLGALIAGAKYRGEFEERLKAVLQEVTSAEGGIILFIDEMHTLIGAGKGDGAMDASNL 300 ALD+GALIAGAKYRGEFEERLKAVL EVT+AEGGIILFIDEMHTL+GAGK DGAMDASNL Sbjct: 241 ALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNL 300 Query: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKDKYE 360 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDT+SILRGLKDKYE Sbjct: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKDKYE 360 Query: 361 QHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSLDRE 420 QHHGVRIADSALVAA TLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS+DRE Sbjct: 361 QHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDRE 420 Query: 421 IIRLKIEQEALKKETDLGSKSRLQTLEKDLVDLEKKSADMTSKWRSEKSKLSDAQKMKGE 480 I+RLKIEQEALKKETD GSK+RL TLEK+L DLE+KSA +T +W +EK+KLSDAQK+K E Sbjct: 421 IVRLKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSE 480 Query: 481 LEQLRTELANAQRKGEFQKAGELAYGRIPELEKKLAAVEASETSSA--SETVTADNIAQV 538 L+ LR ELANAQR+GE+Q+AGELAYGRIPELEKK+A +EA+E S A E VTA++IAQV Sbjct: 481 LDALRIELANAQRRGEYQRAGELAYGRIPELEKKIAEIEANENSGAMVEEAVTANHIAQV 540 Query: 539 VSRWTGVPVDKMLEGEKDKLLRMEEMLGKRVVGQAEAVRAVSTAVRRARAGLQDPNRPIG 598 VSRWTGVPVDKMLEGEK+KLLRMEE LG+RVVGQ EAV AVSTAVRRARAGLQDPNRP+G Sbjct: 541 VSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDPNRPMG 600 Query: 599 SFMFLGPTGVGKTELAKALAEYLFDDETAMIRLDMSEYMEKHSVSRLIGAPPGYVGYDEG 658 SFMFLGPTGVGKTEL KALAEYLFDDETAM+R+DMSE+MEKHSV+RLIGAPPGYVGYDEG Sbjct: 601 SFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEG 660 Query: 659 GALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN 718 G LTEAVRRRPYQV+LFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLI+MTSN Sbjct: 661 GVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSN 720 Query: 719 IGAEYLVNQPEGQSTSAVREQVMNMVRAHFRPEFLNRIDEIILFHRLQKSDMGRIVEIQF 778 +G+EYLVNQPEG+ T AVREQVM MVRAHFRPEFLNR+DEIILFHRLQKS+MGRIV+IQF Sbjct: 721 LGSEYLVNQPEGEDTGAVREQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQF 780 Query: 779 SRLRRLLEDRKIELELDPKARDWLADKGWDPAYGARPLKRVIQRSVQDPLAEMILSGDVR 838 +RL +LLEDRKI L+LD ARDWLA+KGWDPAYGARPLKRVIQRSVQDPLAEMIL G V+ Sbjct: 781 ARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVK 840 Query: 839 DGSEVKLSATKAGLTFNGKKPENAAADEF 867 DG V +SA LTFNGK P A + F Sbjct: 841 DGDHVAISAEGGVLTFNGKPPHTAEVEPF 869