BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0189.0028.p         (84 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_04682245.1| Hypothetical protein OINT_2000708 [Ochrobactr...   135   2e-30
ref|YP_001372150.1| hypothetical protein Oant_3615 [Ochrobactrum...   130   6e-29
ref|YP_002540917.1| hypothetical protein Arad_7926 [Agrobacteriu...   126   1e-27
ref|YP_002967053.1| hypothetical protein MexAM1_META2p0890 [Meth...   125   3e-27
ref|NP_771471.1| hypothetical protein bll4831 [Bradyrhizobium ja...   106   1e-21

>ref|ZP_04682245.1| Hypothetical protein OINT_2000708 [Ochrobactrum intermedium LMG
           3301]
 gb|EEQ93549.1| Hypothetical protein OINT_2000708 [Ochrobactrum intermedium LMG
           3301]
          Length = 114

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/82 (79%), Positives = 72/82 (87%)

Query: 3   QHEIKDNMEVIGADGVHVGTVDHVEGNRIKLKKNDSDGFHKGHHHFIELGFVAGVEGSKV 62
           QHEI++NMEVIGADGVHVGTVDH+E NRIKLKK D+ G H  HHH+IELGFVA VEG KV
Sbjct: 32  QHEIRENMEVIGADGVHVGTVDHIEDNRIKLKKTDNSGQHADHHHYIELGFVADVEGDKV 91

Query: 63  RLSANAAIAVTLEEEKSGKPVD 84
           RLSANA +AVTLEEE SG+PVD
Sbjct: 92  RLSANANVAVTLEEEASGRPVD 113


>ref|YP_001372150.1| hypothetical protein Oant_3615 [Ochrobactrum anthropi ATCC 49188]
 gb|ABS16321.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
          Length = 84

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 71/82 (86%)

Query: 3  QHEIKDNMEVIGADGVHVGTVDHVEGNRIKLKKNDSDGFHKGHHHFIELGFVAGVEGSKV 62
          QH+I++NMEVIGADGVHVGTVD VE NRIKLKK D+ G H  HHH+IELGFVA +EG KV
Sbjct: 2  QHKIQENMEVIGADGVHVGTVDRVEDNRIKLKKTDNSGMHSDHHHYIELGFVADIEGDKV 61

Query: 63 RLSANAAIAVTLEEEKSGKPVD 84
          RLSANA +AVTLEEE SG+PVD
Sbjct: 62 RLSANADVAVTLEEEASGRPVD 83


>ref|YP_002540917.1| hypothetical protein Arad_7926 [Agrobacterium radiobacter K84]
 gb|ACM29321.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 84

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 75/80 (93%)

Query: 5  EIKDNMEVIGADGVHVGTVDHVEGNRIKLKKNDSDGFHKGHHHFIELGFVAGVEGSKVRL 64
          +IK+NMEVIGADGVHVGTV+ +EG+RIKLKK+DS G H+GH+H+IE+GFVAG+EG KVRL
Sbjct: 4  KIKENMEVIGADGVHVGTVERLEGDRIKLKKSDSFGRHEGHYHYIEIGFVAGIEGDKVRL 63

Query: 65 SANAAIAVTLEEEKSGKPVD 84
          SANA IAVTLEEE+SG+PV+
Sbjct: 64 SANADIAVTLEEEQSGRPVN 83


>ref|YP_002967053.1| hypothetical protein MexAM1_META2p0890 [Methylobacterium
          extorquens AM1]
 gb|ACS43712.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 76

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/75 (85%), Positives = 68/75 (90%)

Query: 10 MEVIGADGVHVGTVDHVEGNRIKLKKNDSDGFHKGHHHFIELGFVAGVEGSKVRLSANAA 69
          MEVIGADGVHVGTVD VEG RIKLKK+DS G H+GHHH+IELGFVAGVEG KVRLSANA 
Sbjct: 1  MEVIGADGVHVGTVDRVEGERIKLKKSDSYGRHEGHHHYIELGFVAGVEGDKVRLSANAD 60

Query: 70 IAVTLEEEKSGKPVD 84
          IAVTLEEE+SGK VD
Sbjct: 61 IAVTLEEERSGKAVD 75


>ref|NP_771471.1| hypothetical protein bll4831 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50096.1| bll4831 [Bradyrhizobium japonicum USDA 110]
          Length = 208

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/74 (72%), Positives = 64/74 (86%), Gaps = 1/74 (1%)

Query: 6   IKDNMEVIGADGVHVGTVDHVEGNRIKLKKNDS-DGFHKGHHHFIELGFVAGVEGSKVRL 64
           I ++MEVIGADGVH+GTVD VEG+RIKL K DS +G H+GHHHFI+ G VAGVEG+KVRL
Sbjct: 135 IAEHMEVIGADGVHIGTVDKVEGHRIKLTKKDSGEGSHRGHHHFIDKGLVAGVEGNKVRL 194

Query: 65  SANAAIAVTLEEEK 78
           SA A +AVT+EEEK
Sbjct: 195 SAKADVAVTMEEEK 208