BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0189.0023.p (403 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203018.1| cytosine deaminase [Bradyrhizobium sp. ORS 2... 647 0.0 ref|YP_001242990.1| cytosine deaminase [Bradyrhizobium sp. BTAi1... 642 0.0 ref|NP_770486.1| cytosine deaminase [Bradyrhizobium japonicum US... 632 e-179 ref|YP_002541800.1| cytosine deaminase [Agrobacterium radiobacte... 603 e-170 ref|YP_002542437.1| cytosine deaminase [Agrobacterium radiobacte... 561 e-158 >ref|YP_001203018.1| cytosine deaminase [Bradyrhizobium sp. ORS 278] emb|CAL74781.1| putative Amidohydrolase family protein; putative N-isopropylammelide isopropyl amidohydrolase [Bradyrhizobium sp. ORS 278] Length = 400 Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/400 (79%), Positives = 344/400 (86%) Query: 1 MPADKLFINARFGDGTSRNLLVRGGRIVAIEAKGERPSGIEIVDLDNALVVPGFVEGHIH 60 M DKLFINAR G + V GRI + A+ RP E++DL ALVVPGFVEGHIH Sbjct: 1 MAVDKLFINARLDRGARHAITVDHGRISGLLAETARPEAREVIDLGGALVVPGFVEGHIH 60 Query: 61 LDTSFYGDAWRPHRPCTNGFDVHERVAFQAENLAAAAPMDVRARNQLDLCIGHGTTQMRS 120 LDTSFYGDAW+PH+PCTNGFDVHERVAFQAEN+AAAAPMDVRARNQLDLCIGHGT +MRS Sbjct: 61 LDTSFYGDAWKPHKPCTNGFDVHERVAFQAENMAAAAPMDVRARNQLDLCIGHGTARMRS 120 Query: 121 HVMVDGSVGLKSLETILGVREEYRDLIDIQLVAFPQNGILTSPGTPQLLDEAIKLGANAV 180 HVMVDGSVGLKSLETIL VREEYRDLI+IQLVAFPQ+GI+ SPGTP+LLDEAIK GAN V Sbjct: 121 HVMVDGSVGLKSLETILRVREEYRDLIEIQLVAFPQSGIIKSPGTPELLDEAIKQGANVV 180 Query: 181 GGLDPASFDRDVEGHLDVVFGVAQKHGVDVDIHLHDGGMLGAFEVEQIAARTRALGMAGR 240 GGLDPASFDRDVE HLDVVFGVAQKHGVDVDIHLHDGGMLG FE+EQIA+RTRALGM G Sbjct: 181 GGLDPASFDRDVEKHLDVVFGVAQKHGVDVDIHLHDGGMLGLFELEQIASRTRALGMQGH 240 Query: 241 VTVSHAYGLGDIPADALKKTADSLARSGVAIMTNAPGSRPFPPVALLQKAGVTVFSGNDN 300 V VSHAYGLGD+PA+ LKK AD LA SGVAIMTNAPG+RPFPPVALL+ AGVTVFSGNDN Sbjct: 241 VAVSHAYGLGDLPAEPLKKIADVLAASGVAIMTNAPGARPFPPVALLRAAGVTVFSGNDN 300 Query: 301 IRDSWWPYGDGDMLGRAMMIGYRSGFYTDEELAIAFDMITAAGAKALRLEHYGLHVGAKA 360 IRDSWWPYGDGD+L RAMM+GYRSGFY D+EL AFD++TAAGAKALRL YGL VGA A Sbjct: 301 IRDSWWPYGDGDLLNRAMMVGYRSGFYVDDELRAAFDLVTAAGAKALRLADYGLEVGAHA 360 Query: 361 DFVTLNAVHIQEAVVARPSGRSVYKGGVLAARDNRVVKAA 400 DFVTLNA H+ EAV A P GRSVYK G L ARD RV++ Sbjct: 361 DFVTLNAEHVPEAVAAVPKGRSVYKDGRLIARDGRVMRTC 400 >ref|YP_001242990.1| cytosine deaminase [Bradyrhizobium sp. BTAi1] gb|ABQ39084.1| putative Amidohydrolase family protein [Bradyrhizobium sp. BTAi1] Length = 400 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/398 (78%), Positives = 347/398 (87%) Query: 1 MPADKLFINARFGDGTSRNLLVRGGRIVAIEAKGERPSGIEIVDLDNALVVPGFVEGHIH 60 M DKLFINARF G + V GRI A+ A+ ERP E++DL ALVVPGFVEGHIH Sbjct: 1 MAIDKLFINARFDRGARHAIAVDKGRISALLAETERPEAREVIDLGGALVVPGFVEGHIH 60 Query: 61 LDTSFYGDAWRPHRPCTNGFDVHERVAFQAENLAAAAPMDVRARNQLDLCIGHGTTQMRS 120 LDTSFYGDAW+PH+PCTNGFDVHERV FQA+N+AAAAPMDVRARNQLDLCIGHGTT+MRS Sbjct: 61 LDTSFYGDAWKPHKPCTNGFDVHERVTFQAQNMAAAAPMDVRARNQLDLCIGHGTTRMRS 120 Query: 121 HVMVDGSVGLKSLETILGVREEYRDLIDIQLVAFPQNGILTSPGTPQLLDEAIKLGANAV 180 HVMVDGSVGL SLETIL VR+EYR+LI+IQLVAFPQ+GIL SPGTP+LLDEAI+LGA+ V Sbjct: 121 HVMVDGSVGLNSLETILRVRDEYRELIEIQLVAFPQSGILKSPGTPELLDEAIRLGADLV 180 Query: 181 GGLDPASFDRDVEGHLDVVFGVAQKHGVDVDIHLHDGGMLGAFEVEQIAARTRALGMAGR 240 GGLDPASFDRDVE HLDVVFGVAQKHGVD+DIHLHD GMLG FE+EQIAARTR LGM G Sbjct: 181 GGLDPASFDRDVEKHLDVVFGVAQKHGVDIDIHLHDPGMLGLFELEQIAARTRVLGMQGH 240 Query: 241 VTVSHAYGLGDIPADALKKTADSLARSGVAIMTNAPGSRPFPPVALLQKAGVTVFSGNDN 300 V VSHAY LGD+ ADALK+ AD LA SGVAIMTNAPG+RPFPPVALL+ AGVTVFSGNDN Sbjct: 241 VVVSHAYALGDLAADALKRIADVLATSGVAIMTNAPGARPFPPVALLRAAGVTVFSGNDN 300 Query: 301 IRDSWWPYGDGDMLGRAMMIGYRSGFYTDEELAIAFDMITAAGAKALRLEHYGLHVGAKA 360 IRDSWWPYGDGD+L RAMM+GYRSGFY DEEL IAFD++T AGAKALRL YGL+VGA+A Sbjct: 301 IRDSWWPYGDGDLLNRAMMVGYRSGFYVDEELRIAFDLVTDAGAKALRLAGYGLNVGARA 360 Query: 361 DFVTLNAVHIQEAVVARPSGRSVYKGGVLAARDNRVVK 398 DFVTL+A H+ EAVVA P GRSVYK G L ARD RV++ Sbjct: 361 DFVTLDAEHVPEAVVAVPKGRSVYKDGRLVARDGRVLR 398 >ref|NP_770486.1| cytosine deaminase [Bradyrhizobium japonicum USDA 110] dbj|BAC49111.1| hydrolase [Bradyrhizobium japonicum USDA 110] Length = 401 Score = 632 bits (1629), Expect = e-179, Method: Compositional matrix adjust. Identities = 311/401 (77%), Positives = 343/401 (85%) Query: 1 MPADKLFINARFGDGTSRNLLVRGGRIVAIEAKGERPSGIEIVDLDNALVVPGFVEGHIH 60 M D LF+NARF GT ++ V+ GRI AI + + P+G E +DL +ALVVPGFVEGHIH Sbjct: 1 MAFDTLFLNARFDGGTRHHIAVKDGRIAAITSVDQPPAGAETIDLKDALVVPGFVEGHIH 60 Query: 61 LDTSFYGDAWRPHRPCTNGFDVHERVAFQAENLAAAAPMDVRARNQLDLCIGHGTTQMRS 120 LDTSFYGDAWRPH+PC +GF+VHERVAFQA+N+A AAPMDVRARNQLDLCIGHGTTQMRS Sbjct: 61 LDTSFYGDAWRPHKPCADGFNVHERVAFQAQNMAEAAPMDVRARNQLDLCIGHGTTQMRS 120 Query: 121 HVMVDGSVGLKSLETILGVREEYRDLIDIQLVAFPQNGILTSPGTPQLLDEAIKLGANAV 180 HV+VDGSVGLKSLETIL VREEY LIDIQLVAFPQ+GIL+SPGT QLLDEAI LGAN V Sbjct: 121 HVIVDGSVGLKSLETILRVREEYNGLIDIQLVAFPQSGILSSPGTAQLLDEAIGLGANLV 180 Query: 181 GGLDPASFDRDVEGHLDVVFGVAQKHGVDVDIHLHDGGMLGAFEVEQIAARTRALGMAGR 240 GGLDPASFDRDVE HLDVVFGVA KHGVD+DIHLHD G LGAFE+EQIAARTRALGM GR Sbjct: 181 GGLDPASFDRDVEKHLDVVFGVANKHGVDIDIHLHDMGTLGAFEIEQIAARTRALGMEGR 240 Query: 241 VTVSHAYGLGDIPADALKKTADSLARSGVAIMTNAPGSRPFPPVALLQKAGVTVFSGNDN 300 V VSHAYGLGDIPAD LKK A+ LARSGVAIMTNAPG+RPFPP+ L+ AGVTVFSGNDN Sbjct: 241 VAVSHAYGLGDIPADYLKKVAEILARSGVAIMTNAPGARPFPPILALRNAGVTVFSGNDN 300 Query: 301 IRDSWWPYGDGDMLGRAMMIGYRSGFYTDEELAIAFDMITAAGAKALRLEHYGLHVGAKA 360 IRDSWWPYGDGDML RA +GYRSGF DEEL AFD++TA+GAKALRLE YGL +GAKA Sbjct: 301 IRDSWWPYGDGDMLRRATTLGYRSGFNIDEELRAAFDVVTASGAKALRLEGYGLRIGAKA 360 Query: 361 DFVTLNAVHIQEAVVARPSGRSVYKGGVLAARDNRVVKAAG 401 DFV LNA H+ EAVVA P GRSVYK G L A + R+V +G Sbjct: 361 DFVALNAEHVPEAVVAVPQGRSVYKDGRLVAANGRIVGKSG 401 >ref|YP_002541800.1| cytosine deaminase [Agrobacterium radiobacter K84] gb|ACM30203.1| cytosine deaminase protein [Agrobacterium radiobacter K84] Length = 400 Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust. Identities = 289/398 (72%), Positives = 336/398 (84%) Query: 2 PADKLFINARFGDGTSRNLLVRGGRIVAIEAKGERPSGIEIVDLDNALVVPGFVEGHIHL 61 P + LF A+ DG+ +++ V GGRI++I+ E VDL ALVVPGFVEGHIHL Sbjct: 3 PIETLFTRAKLADGSLKDIGVSGGRIISIDPSSAEAPLAESVDLGGALVVPGFVEGHIHL 62 Query: 62 DTSFYGDAWRPHRPCTNGFDVHERVAFQAENLAAAAPMDVRARNQLDLCIGHGTTQMRSH 121 DTSF+GDAW PH+PCTNGFDVHERVAFQA+N+A AAPMD RARNQLDLCI +G+TQMRSH Sbjct: 63 DTSFFGDAWIPHKPCTNGFDVHERVAFQAQNMAQAAPMDERARNQLDLCIANGSTQMRSH 122 Query: 122 VMVDGSVGLKSLETILGVREEYRDLIDIQLVAFPQNGILTSPGTPQLLDEAIKLGANAVG 181 VMVDGSVGLKSL T+L VRE+YRD IDIQLVAFPQ+GIL S GTPQL+DEAI +GA+ VG Sbjct: 123 VMVDGSVGLKSLGTVLAVREDYRDYIDIQLVAFPQSGILKSSGTPQLMDEAISMGADLVG 182 Query: 182 GLDPASFDRDVEGHLDVVFGVAQKHGVDVDIHLHDGGMLGAFEVEQIAARTRALGMAGRV 241 GLDPASFDRDVEGHL+VVFGVA+KHGVDVDIHLHDGG LG F +EQI +RTRAL M G V Sbjct: 183 GLDPASFDRDVEGHLNVVFGVAEKHGVDVDIHLHDGGTLGLFTIEQICSRTRALSMQGHV 242 Query: 242 TVSHAYGLGDIPADALKKTADSLARSGVAIMTNAPGSRPFPPVALLQKAGVTVFSGNDNI 301 +SHAYGLGD+P +A+K+ A+++A SGV+IMTNAPG+ FPPVALL+ AGVTVFSG+DNI Sbjct: 243 AISHAYGLGDLPVEAVKRAAETIAASGVSIMTNAPGNHAFPPVALLRTAGVTVFSGSDNI 302 Query: 302 RDSWWPYGDGDMLGRAMMIGYRSGFYTDEELAIAFDMITAAGAKALRLEHYGLHVGAKAD 361 RDSWWPYGDGDMLGRAMMIGYRSGFYTD+EL AFD++T +GAKALRL+ YGL +GAKAD Sbjct: 303 RDSWWPYGDGDMLGRAMMIGYRSGFYTDDELKAAFDVVTDSGAKALRLDGYGLKIGAKAD 362 Query: 362 FVTLNAVHIQEAVVARPSGRSVYKGGVLAARDNRVVKA 399 FVTL A H+ EAVVA P RSVYK G L AR+ V++A Sbjct: 363 FVTLKAEHVPEAVVAIPRERSVYKAGRLVARNGAVIRA 400 >ref|YP_002542437.1| cytosine deaminase [Agrobacterium radiobacter K84] gb|ACM30840.1| cytosine deaminase protein [Agrobacterium radiobacter K84] Length = 397 Score = 561 bits (1446), Expect = e-158, Method: Compositional matrix adjust. Identities = 275/394 (69%), Positives = 316/394 (80%), Gaps = 2/394 (0%) Query: 6 LFINARFGDGTSRNLLVRGGRIVAIEAKGERP--SGIEIVDLDNALVVPGFVEGHIHLDT 63 LF N R + ++ VR GRI AI + G P +G +VDL LV+PG VEGHIHLDT Sbjct: 4 LFSNGRLPEAGLVDITVRDGRIEAISSAGTEPGRAGETMVDLGGRLVLPGLVEGHIHLDT 63 Query: 64 SFYGDAWRPHRPCTNGFDVHERVAFQAENLAAAAPMDVRARNQLDLCIGHGTTQMRSHVM 123 SFYG W HRPCTNGFDV ERVAFQ EN+A A PMDVRAR QL+LCI +GTT MRSHVM Sbjct: 64 SFYGGKWISHRPCTNGFDVRERVAFQHENMALAEPMDVRARKQLELCIVNGTTAMRSHVM 123 Query: 124 VDGSVGLKSLETILGVREEYRDLIDIQLVAFPQNGILTSPGTPQLLDEAIKLGANAVGGL 183 +D SVGL+SLETIL VREEYR LID+QLVAFPQ+GILTSPGT LLD+AI+LGA+ VGGL Sbjct: 124 IDASVGLRSLETILAVREEYRSLIDLQLVAFPQSGILTSPGTSDLLDKAIELGADLVGGL 183 Query: 184 DPASFDRDVEGHLDVVFGVAQKHGVDVDIHLHDGGMLGAFEVEQIAARTRALGMAGRVTV 243 DP S DRD+EGHL VVFGVA + G DVDIHLHD GMLG F ++QI RTRALG+ GRV V Sbjct: 184 DPGSLDRDIEGHLAVVFGVAARRGGDVDIHLHDAGMLGVFTIKQICVRTRALGLEGRVAV 243 Query: 244 SHAYGLGDIPADALKKTADSLARSGVAIMTNAPGSRPFPPVALLQKAGVTVFSGNDNIRD 303 SHAY LGD+ AD K+ AD LARSGV+IMTNAP ++ FPPVALL+ AGVTVFSG+DNIRD Sbjct: 244 SHAYALGDVAADIAKRAADELARSGVSIMTNAPTAQAFPPVALLRAAGVTVFSGSDNIRD 303 Query: 304 SWWPYGDGDMLGRAMMIGYRSGFYTDEELAIAFDMITAAGAKALRLEHYGLHVGAKADFV 363 SWWPYGDGDMLGRAMMIGYRSGFYTDEEL AFD++T AGA+ALRLE YGL +GAKADF+ Sbjct: 304 SWWPYGDGDMLGRAMMIGYRSGFYTDEELNAAFDVVTTAGARALRLEGYGLKIGAKADFI 363 Query: 364 TLNAVHIQEAVVARPSGRSVYKGGVLAARDNRVV 397 L A H+ EAVV+ P RSVYK G L ++D +++ Sbjct: 364 VLEAEHVAEAVVSVPRSRSVYKSGRLVSQDGKLI 397