BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0189.0017.p (406 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770004.1| hypothetical protein blr3364 [Bradyrhizobium ja... 589 e-166 ref|ZP_08630402.1| hypothetical protein CSIRO_3508 [Bradyrhizobi... 306 3e-81 ref|YP_782503.1| monooxygenase protein [Rhodopseudomonas palustr... 273 4e-71 ref|NP_103523.1| hypothetical protein mlr2092 [Mesorhizobium lot... 273 5e-71 ref|YP_004611714.1| monooxygenase FAD-binding protein [Mesorhizo... 271 1e-70 >ref|NP_770004.1| hypothetical protein blr3364 [Bradyrhizobium japonicum USDA 110] dbj|BAC48629.1| blr3364 [Bradyrhizobium japonicum USDA 110] Length = 418 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 282/406 (69%), Positives = 335/406 (82%) Query: 1 MIAEKSATKPIVACEAEVIEADVAIVGAGLAGSLARAVLARAGYRVILIDKRLIPPDEFR 60 M A+ + T+PI A I ADVAIVG GLAGSLA AVLARAG+RV L+DKR + PDEFR Sbjct: 12 MTADSTVTEPIAAAATTTIVADVAIVGGGLAGSLAAAVLARAGHRVALVDKRAVYPDEFR 71 Query: 61 VEKIAGRQIDILRRLGFIDDVEAIAAPYDRVLNIRSGKLVDIGVGRSYGISYANLVNMAR 120 VEKI G Q+++ RRLGFI + ++A PYD+VLN+R GK+VD+ VG++YG+ YA LV MAR Sbjct: 72 VEKIGGPQLEMFRRLGFIRGLASVACPYDQVLNVREGKVVDVSVGQAYGLPYAGLVAMAR 131 Query: 121 GLTPDASSFLLDQVTNVSCSEQRQQLTLASGRRVVSRLVILATGMTNVLGHSLGIRRRML 180 G PD SS ++D+VT V+CS+ Q L LASGRR+ +RLV+LATGM LG+ LGIRRR+L Sbjct: 132 GQIPDPSSLIVDEVTAVTCSDDVQHLELASGRRLNARLVVLATGMAGALGYKLGIRRRVL 191 Query: 181 AARHSVSFGFTIARPDNAPFDFDALTCYGEEATDGVDYLSLFPMSGGMRANLFMFRDPTD 240 AA HSVSFGFTI R D PFDF ALTCYGE +DGVDYLSLFP+ GMRANLFMFRDPTD Sbjct: 192 AAGHSVSFGFTIVRRDGTPFDFKALTCYGERTSDGVDYLSLFPVPAGMRANLFMFRDPTD 251 Query: 241 PIMRELRRDTRRTLLRLMPGLQPYLGDFEVVGQVQNWVMDLTVTEGHLRPGVVLIGDAFQ 300 P+MR+LRRDT T+LRL+PGLQPYLGDF V +VQNWVMDL+V EGHL+PGVVLIGDAFQ Sbjct: 252 PVMRDLRRDTEATVLRLLPGLQPYLGDFRVTDRVQNWVMDLSVVEGHLQPGVVLIGDAFQ 311 Query: 301 TNCPAAGTGVGRLLVDVERLCTDYVPRWLETAGMGVDKIAQFYSDRDKLAADQHSLQLAS 360 TNCPAAGTGV RLLVDVERLCT+Y PRWL T GMG +KI++FYSDRDK+AADQ SL++A Sbjct: 312 TNCPAAGTGVARLLVDVERLCTEYAPRWLATEGMGKEKISEFYSDRDKIAADQQSLKMAR 371 Query: 361 FRQALTLNTDMRWNLRRKLHFLRRMITHRVDRIHPGWVMRVRSALR 406 FRQALT D+ W++RR+LHFLRR ITHRVD++ PGW+ +VRSALR Sbjct: 372 FRQALTSRDDISWDVRRRLHFLRRSITHRVDQMRPGWLAQVRSALR 417 >ref|ZP_08630402.1| hypothetical protein CSIRO_3508 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06781.1| hypothetical protein CSIRO_3508 [Bradyrhizobiaceae bacterium SG-6C] Length = 388 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 155/365 (42%), Positives = 227/365 (62%) Query: 20 EADVAIVGAGLAGSLARAVLARAGYRVILIDKRLIPPDEFRVEKIAGRQIDILRRLGFID 79 D+AI+G GLAGS A A+L RAG ILID I P +FR EK+ G Q+D+LR+ G D Sbjct: 3 HTDIAIIGGGLAGSTAAAMLGRAGISAILIDPHKIYPPDFRCEKLGGYQLDLLRKTGIAD 62 Query: 80 DVEAIAAPYDRVLNIRSGKLVDIGVGRSYGISYANLVNMARGLTPDASSFLLDQVTNVSC 139 V A R G+L+D +GI Y +LVN R P+ F+ D+VT V+ Sbjct: 63 PVLAATTLDGNAWTARLGRLLDKKPSDQHGIIYDDLVNTVRRQIPETVEFIEDKVTGVAT 122 Query: 140 SEQRQQLTLASGRRVVSRLVILATGMTNVLGHSLGIRRRMLAARHSVSFGFTIARPDNAP 199 S Q LTL++G + +RL++LA G+ L H+LGI R +++ HS++ GF + Sbjct: 123 SPDLQTLTLSNGETISARLIVLANGLNIGLRHTLGIEREVISPCHSITVGFNVVPVGRDT 182 Query: 200 FDFDALTCYGEEATDGVDYLSLFPMSGGMRANLFMFRDPTDPIMRELRRDTRRTLLRLMP 259 F+F ALT + E AT + YL+LFP+ MRANL ++R DP +R +R+ + + LMP Sbjct: 183 FEFPALTYFTESATAQMSYLTLFPIGSAMRANLMVYRGMDDPWLRRMRQAPEQAIHELMP 242 Query: 260 GLQPYLGDFEVVGQVQNWVMDLTVTEGHLRPGVVLIGDAFQTNCPAAGTGVGRLLVDVER 319 L+ G+F+V G ++ DL VT+GH + G+VL+GDAF T+CPAAGTG G++ +DV+R Sbjct: 243 NLRALSGEFKVDGMIKIRPADLYVTKGHRQAGIVLVGDAFCTSCPAAGTGTGKVFMDVQR 302 Query: 320 LCTDYVPRWLETAGMGVDKIAQFYSDRDKLAADQHSLQLASFRQALTLNTDMRWNLRRKL 379 LC Y+P WL + GMG +KI+QFY D +K A D S + A ++++++T + W++RR + Sbjct: 303 LCNAYIPAWLASGGMGAEKISQFYDDPEKCANDASSQRQAYDLRSISIDTGLSWHVRRWI 362 Query: 380 HFLRR 384 FL R Sbjct: 363 RFLHR 367 >ref|YP_782503.1| monooxygenase protein [Rhodopseudomonas palustris BisA53] gb|ABJ07523.1| monooxygenase, FAD-binding protein [Rhodopseudomonas palustris BisA53] Length = 391 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 153/363 (42%), Positives = 207/363 (57%) Query: 22 DVAIVGAGLAGSLARAVLARAGYRVILIDKRLIPPDEFRVEKIAGRQIDILRRLGFIDDV 81 D+AIVG GLAGS+A A+L RAG +LID + P +FR EK+ G Q+ IL + G + Sbjct: 5 DIAIVGGGLAGSIAAAMLGRAGVSAMLIDPHPVYPVDFRCEKLGGNQLAILHKTGLAEAA 64 Query: 82 EAIAAPYDRVLNIRSGKLVDIGVGRSYGISYANLVNMARGLTPDASSFLLDQVTNVSCSE 141 V R G+LVD YGI Y LVN R P L + T +S E Sbjct: 65 LRATTHDGSVWIARFGRLVDRKPSDQYGIRYEALVNAMRAEIPARIPLLHAKATAISTGE 124 Query: 142 QRQQLTLASGRRVVSRLVILATGMTNVLGHSLGIRRRMLAARHSVSFGFTIARPDNAPFD 201 Q++TL+ G + +RLV+LA G+ L +LGI R+++ HSV+ GF +A F Sbjct: 125 TYQRVTLSDGVDISARLVVLANGLNKGLRRTLGIEHRIVSECHSVTIGFDLAPIGRQHFP 184 Query: 202 FDALTCYGEEATDGVDYLSLFPMSGGMRANLFMFRDPTDPIMRELRRDTRRTLLRLMPGL 261 F ALT Y E +D + YL+LFP+ MRANL ++R DP +++LR TL +LMP L Sbjct: 185 FRALTYYPERPSDRMAYLTLFPIGDAMRANLMVYRPLDDPWLQQLRCAPEDTLHQLMPRL 244 Query: 262 QPYLGDFEVVGQVQNWVMDLTVTEGHLRPGVVLIGDAFQTNCPAAGTGVGRLLVDVERLC 321 GDF V G+++ DL EGH + G+VLIGDAF T+CPAAGTG ++ D ERLC Sbjct: 245 GRLTGDFSVAGELKIRPADLYAVEGHRQAGLVLIGDAFATSCPAAGTGTDKVFTDAERLC 304 Query: 322 TDYVPRWLETAGMGVDKIAQFYSDRDKLAADQHSLQLASFRQALTLNTDMRWNLRRKLHF 381 ++P WL T GMG DKI FY D K+A D + + A +AL+ + + W RR F Sbjct: 305 NIHIPNWLATPGMGRDKIEAFYDDPVKVACDDRAREKAFHLRALSTDNGLTWQARRWARF 364 Query: 382 LRR 384 + R Sbjct: 365 VAR 367 >ref|NP_103523.1| hypothetical protein mlr2092 [Mesorhizobium loti MAFF303099] dbj|BAB49309.1| mlr2092 [Mesorhizobium loti MAFF303099] Length = 406 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 150/402 (37%), Positives = 226/402 (56%), Gaps = 12/402 (2%) Query: 4 EKSATKPIVACEAEVIEADVAIVGAGLAGSLARAVLARAGYRVILIDKRLIPPDEFRVEK 63 ++ K + A E DVAI+GAG+AG+ +L AG +V LID + DEFR EK Sbjct: 6 DQQKGKDMTTAAAGPTEVDVAIIGAGMAGTTLATLLGNAGRKVALIDPHRVHHDEFRAEK 65 Query: 64 IAGRQIDILRRLGFIDDVEAIAAPYDRVLNIRSGKLVDIGVGRSYGISYANLVNMARGLT 123 I Q+ + +LG V + P+ + R G+ Y SY L+N R Sbjct: 66 IGADQMQLFEKLGLDKMVMPLVTPFTDIDVFRLGQFFAREKKWEYAFSYGALINGLRDAL 125 Query: 124 PDASSFLLDQVTNVSCSEQRQQLTLASGRRVVSRLVILATGMTNVLGHSLGIRRRMLAAR 183 P + +V VS RQ+L LA G + +RL+++ATG + ++ ++G+ R L+ Sbjct: 126 PPQVPITIGKVAEVSTGPNRQRLVLADGAVIDARLLVVATGYSELVRRAIGVERIELSKA 185 Query: 184 HSVSFGFTIARPDNAPFD--FDALTCYGEEATDGVDYLSLFPMSGGMRANLFMFRDPTDP 241 HS+S GF +A AP D + A+TCYG+ A+D V YL++FP+ MRAN+F++R + Sbjct: 186 HSLSMGFDLA---IAPRDCAYRAVTCYGKRASDRVAYLTVFPIGDKMRANMFVYRTVAEQ 242 Query: 242 IMRELRRDTRRTLLRLMPGLQPYLGDFEVVGQVQNWVMDLTVTEGHLRPGVVLIGDAFQT 301 R+ R D ++ L LMP + G+FEV V+ ++LT T+GH R GVV IGDAF T Sbjct: 243 WTRDFRADPQKMLCELMPEIATQCGNFEVASPVEVRQVNLTTTQGHRRDGVVFIGDAFVT 302 Query: 302 NCPAAGTGVGRLLVDVERLCTDYVPRWLETAGMGVDKIAQFYSDRDKLAADQHSLQLASF 361 CP G G+GR++VDV++L + ++PRWLET GM DKI FY D K+AAD+ ++++ + Sbjct: 303 TCPTPGVGIGRVMVDVDQLHSVHIPRWLETPGMAADKIGAFYDDPVKVAADKAGMRVSFY 362 Query: 362 RQALTLNTDMRWNLR-------RKLHFLRRMITHRVDRIHPG 396 + +T T + W +R R+L + R + H R PG Sbjct: 363 AKQITTETGLEWRVRRLRNNAARQLMIIGRKMRHLGPRREPG 404 >ref|YP_004611714.1| monooxygenase FAD-binding protein [Mesorhizobium opportunistum WSM2075] gb|AEH87620.1| monooxygenase FAD-binding protein [Mesorhizobium opportunistum WSM2075] Length = 402 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 147/392 (37%), Positives = 221/392 (56%), Gaps = 12/392 (3%) Query: 14 CEAEVIEADVAIVGAGLAGSLARAVLARAGYRVILIDKRLIPPDEFRVEKIAGRQIDILR 73 EA+ E DVAIVGAG+AG+ +L +AG +V LID + DEFR EKI Q+ + Sbjct: 12 AEADAAEVDVAIVGAGMAGTSLAMLLGKAGRKVALIDPHRVHHDEFRAEKIGADQMQLFE 71 Query: 74 RLGFIDDVEAIAAPYDRVLNIRSGKLVDIGVGRSYGISYANLVNMARGLTPDASSFLLDQ 133 +LG V + P+ + R G+ Y SY +L+N R P + + Sbjct: 72 KLGLDKTVMPLVTPFSDLYVFRLGQFFAREKKWEYAFSYGSLINGLRDALPPQVPLTVGK 131 Query: 134 VTNVSCSEQRQQLTLASGRRVVSRLVILATGMTNVLGHSLGIRRRMLAARHSVSFGFTIA 193 VT VS RQ+L LA + +RL+++ATG + + ++G+ R + HS+S GF +A Sbjct: 132 VTEVSTGPDRQRLVLADRSVINARLLVVATGYSEAVRRAIGVERIEESKAHSLSMGFDLA 191 Query: 194 RPDNAPFD--FDALTCYGEEATDGVDYLSLFPMSGGMRANLFMFRDPTDPIMRELRRDTR 251 +P D + A+TCYG A D V YL++FP+ MRAN+F++R + R+ R D + Sbjct: 192 ---ISPRDCAYQAITCYGRRAEDRVAYLTIFPIGNKMRANMFVYRTVAEQWTRDFRADPQ 248 Query: 252 RTLLRLMPGLQPYLGDFEVVGQVQNWVMDLTVTEGHLRPGVVLIGDAFQTNCPAAGTGVG 311 + L LMP + G+FEV V+ ++L+ T+GH R GVV IGDAF T CP G G+G Sbjct: 249 KMLCELMPEISAQCGNFEVASPVEVRQINLSTTQGHRRDGVVFIGDAFWTTCPTPGVGIG 308 Query: 312 RLLVDVERLCTDYVPRWLETAGMGVDKIAQFYSDRDKLAADQHSLQLASFRQALTLNTDM 371 R++VDV++L + ++PRWLET GM DKI FY D K A+D+ ++++ + + +T T + Sbjct: 309 RVMVDVDQLHSVHIPRWLETPGMAADKIDAFYDDPVKGASDEKGMRVSFYAKRITTETGL 368 Query: 372 RWNLR-------RKLHFLRRMITHRVDRIHPG 396 W +R R+L + R + H R PG Sbjct: 369 EWRVRRLRNNTARQLMIIGRKVRHLGSRRQPG 400