BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0189.0015.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770003.1| hypothetical protein bll3363 [Bradyrhizobium ja... 415 e-114 ref|ZP_05115493.1| Polysaccharide biosynthesis protein [Labrenzi... 138 2e-30 ref|ZP_08072867.1| multi antimicrobial extrusion protein MatE [M... 110 4e-22 ref|YP_484625.1| teichoic acid export membrane protein [Rhodopse... 107 3e-21 ref|YP_568246.1| putative membrane protein involved in export of... 105 1e-20 >ref|NP_770003.1| hypothetical protein bll3363 [Bradyrhizobium japonicum USDA 110] dbj|BAC48628.1| bll3363 [Bradyrhizobium japonicum USDA 110] Length = 541 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 214/276 (77%), Positives = 243/276 (88%) Query: 1 VLQLLRRDVTRGVAGTILLKVGSGGLAFALFSLAARAMTPDAFGNFATLLSVAQIASVVG 60 ++Q LRRDVTRGV GTILLKVGSG LAFALFSLAAR M+PD FG FAT LSVAQIA+VVG Sbjct: 98 IVQFLRRDVTRGVVGTILLKVGSGALAFALFSLAARTMSPDGFGIFATWLSVAQIAAVVG 157 Query: 61 LVGQELLLVRFLNEYEVRGQTEFTKGVLLSSLKNSAIGMLISIAAIAAVASLRGEWWLLI 120 LVGQE LLVRFLNEY+V + + TKGVLLSS K +++ MLI+IAA+A ASLRG+WWLLI Sbjct: 158 LVGQESLLVRFLNEYQVEDRPDLTKGVLLSSFKMTSVAMLIAIAAVALAASLRGDWWLLI 217 Query: 121 LSVSAFTAVNAGLMLGSQIARSLVSILMGEGNREFFWRVAVVLFLIAVLFGHRQLTPTEL 180 L++SA+TAVNAGLMLGSQIARSLVSILMGEGNRE FWRV VVLFL+A+LFGHRQL P EL Sbjct: 218 LALSAYTAVNAGLMLGSQIARSLVSILMGEGNRELFWRVIVVLFLLAMLFGHRQLDPAEL 277 Query: 181 FSAMSAAMALGLVVQIVSIVRVLPNLRSVTARFEASRWNKSAFRFWLASILEAANQYFDV 240 F+ M+ AM++GLV Q+V+I R LP+LRS AR+E SRW SA FW+ASILEAANQYFDV Sbjct: 278 FAVMTIAMSVGLVAQVVAIARALPDLRSTAARYETSRWRASALHFWVASILEAANQYFDV 337 Query: 241 ILVYWMLDPATAGVYFAASRLANIFAMLSAALYTFG 276 ILVYWMLDPATAG+YFAASRLANIFAMLSAALY+FG Sbjct: 338 ILVYWMLDPATAGIYFAASRLANIFAMLSAALYSFG 373 >ref|ZP_05115493.1| Polysaccharide biosynthesis protein [Labrenzia alexandrii DFL-11] gb|EEE46092.1| Polysaccharide biosynthesis protein [Labrenzia alexandrii DFL-11] Length = 448 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 106/283 (37%), Positives = 148/283 (52%), Gaps = 25/283 (8%) Query: 7 RDVTRGVAGTILLKVGSGGLAFALFSLAARAMTPDAFGNFATLLSVAQIASVVGLVGQEL 66 R TRGV ++++K S AFALF+L+AR + + FG FA S A +A+V GQE+ Sbjct: 14 RSETRGVIVSMMVKAASILSAFALFTLSARVLGEEQFGQFALFFSAASMAAVASAFGQEM 73 Query: 67 LLVRFLNEYEVRGQTEFTKGVLLSSLKNSAIGMLISIAAIAAVASLRGEWWLLILSVSAF 126 L++R NE G+ KG ++ L SA+G + +A + W LS F Sbjct: 74 LIIRIWNENVAAGRISVAKGGIVFGLLISALGATLGAIVMAGMVYFYSNW-AAALSAGLF 132 Query: 127 TAVNAGLMLGSQIARSLVSILMGEGNREFFWRVAVVLFLIAVLFGHRQLTPTELFSAMSA 186 A L+ S +ARS+VSIL+G+G RE L A+LF + L +F S+ Sbjct: 133 VAAAVFLLFFSSLARSIVSILVGDGQRE----------LTALLFANVVLIFCLVFDWSSS 182 Query: 187 A------MALGLVV----QIVSIVRVL----PNLRSVTARFEASRWNKSAFRFWLASILE 232 + LG VV Q+ + RVL P + + F RW S+ R W ASILE Sbjct: 183 VTSVVNLIVLGKVVAIALQVFFLTRVLRRMYPEIFTAKPEFAVDRWLPSSTRLWFASILE 242 Query: 233 AANQYFDVILVYWMLDPATAGVYFAASRLANIFAMLSAALYTF 275 ++NQY DVILV ++LDP AG YF +RLAN FA ++ A F Sbjct: 243 SSNQYLDVILVGYLLDPIAAGAYFVTTRLANGFASVADAFNMF 285 >ref|ZP_08072867.1| multi antimicrobial extrusion protein MatE [Methylocystis sp. ATCC 49242] gb|EFX99613.1| multi antimicrobial extrusion protein MatE [Methylocystis sp. ATCC 49242] Length = 462 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 87/273 (31%), Positives = 136/273 (49%), Gaps = 18/273 (6%) Query: 19 LKVGSGGLAFALFSLAARAMTPDAFGNFATLLSVAQIASVVGLVGQELLLVRFLNEYEVR 78 +K G L +F+LAARAM+ D FG A + +V + GQ+ L+ R EY + Sbjct: 26 IKAGGALLTLTVFTLAARAMSADEFGRLAIWFNAMSFLAVAAVFGQDTLIARNFGEYAGK 85 Query: 79 GQTEFTKGVLLSSLKNSAIGMLISIAAIAAVASL------RGEWWLLILSVSAFTAVNAG 132 G G + + I + +A + A+A L R +L+ + F Sbjct: 86 GDYAQAWGAYRFGWRWTLISGAVFVAGLIALAPLIYPDIARTA----LLAGAFFLFTQTA 141 Query: 133 LMLGSQIARSLVSILMGEGNREFFWRVAVVLFLI-AVLFGHRQLTPTELFSAMSAAMALG 191 L S +R V+I++ E NRE WR+ +++ +I +VL H+ LTP E F+A + L Sbjct: 142 LHYSSHSSRVAVNIVVSETNRELSWRLVLLVVVIWSVL--HQGLTPAEFFAAAAIGQILS 199 Query: 192 LVVQIVSIVRVLPNLRSVTARFEASR--WNKSAFRFWLASILEAANQYFDVILVYWMLDP 249 L Q++ + R SVT + R W W ++++EAA+ YFDV+L+ + P Sbjct: 200 LGAQLIYMRRSYRT-HSVTLLRDDDRKHWFARGLAMWQSAMVEAASLYFDVMLIGYFASP 258 Query: 250 ATAGVYFAASRLANIFAMLSAAL--YTFGXEAD 280 A AG YF A+R+ANIF M+ L Y+F A+ Sbjct: 259 AVAGDYFVAARIANIFMMVLTGLNTYSFSHSAN 291 >ref|YP_484625.1| teichoic acid export membrane protein [Rhodopseudomonas palustris HaA2] gb|ABD05714.1| teichoic acid export membrane protein [Rhodopseudomonas palustris HaA2] Length = 450 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 17/285 (5%) Query: 1 VLQLLRRDVTRGVAGTILLKVGSGGLAFALFSLAARAMTPDAFGNFATLLSVAQIASVVG 60 V+QL R +AG L+VG + AL +LAAR ++ FG ++ L S A + SV+ Sbjct: 10 VIQLRHDSTVRSMAGAFALRVGITVVNLALVTLAARMLSRHDFGTYSMLFSAAGLLSVIA 69 Query: 61 LVGQELLLVRFLNEYEVRGQTEFTKGVLLSSLKNSAIGMLISIAAIAAVASLRGEWWL-- 118 GQ++ ++R +E+ G KG L S L +A + V W+ Sbjct: 70 TFGQQIFVMRSWSEFGAAGDESRLKGALTFS-------TLACLAGVTLVGLPFYVWFAAE 122 Query: 119 ----LILSVSAFTAVNAGLMLGSQIARSLVSILMGEGNREFFWRVAVVLFLIAVLFGHRQ 174 L LS + + + ++ + +ARS V + +G+G V +L+LI Sbjct: 123 HDTALALSATLYLVSYSLMLTSAHVARSAVGVRIGDGLTYLLVAVCPILYLIGCYALGAP 182 Query: 175 LTPTELFSAMSAAMALGLVVQIV----SIVRVLPNLRSVTARFEASRWNKSAFRFWLASI 230 + +F M+ A A +VV + I P L F+ W + + W+++ Sbjct: 183 IRIHVIFLTMAGASAFTVVVHMTLLRQQIRMKFPALGRSRPSFDLRTWIARSAKLWVSAG 242 Query: 231 LEAANQYFDVILVYWMLDPATAGVYFAASRLANIFAMLSAALYTF 275 LEAANQY DV+++ ++ P+ AG YF +R+AN FAM + A+Y F Sbjct: 243 LEAANQYADVVIIGYLTTPSIAGAYFVTTRIANAFAMATGAVYIF 287 >ref|YP_568246.1| putative membrane protein involved in export of O-antigen [Rhodopseudomonas palustris BisB5] gb|ABE38345.1| putative membrane protein involved in export of O-antigen [Rhodopseudomonas palustris BisB5] Length = 450 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 25/289 (8%) Query: 1 VLQLLRRDVTRGVAGTILLKVGSGGLAFALFSLAARAMTPDAFGNFATLLSVAQIASVVG 60 ++ L R + G + L+V + AL +LAAR ++ FG+++ L S A + SV+ Sbjct: 10 IIGLRNNSTVRAMTGALALRVAITIVNLALVTLAARMLSRHDFGSYSMLFSAASLLSVIA 69 Query: 61 LVGQELLLVRFLNEYEVRGQTEFTKGVLLSSLKNSAIGMLISIAAIAAVASLRG---EWW 117 GQ++ ++R +E+ G + KG M S A AA +L G +W Sbjct: 70 TFGQQIFIMRSWSEFGSAGDEKMLKG-----------AMTFSALACAAGVTLVGVPFYFW 118 Query: 118 -------LLILSVSAFTAVNAGLMLGSQIARSLVSILMGEGNREFFWRVAVVLFLIAVLF 170 LL LS + + + ++ + RS V + +G+G + +L+L Sbjct: 119 FAAEHDSLLALSATLYLVCFSLVLTSGHLTRSAVGVGVGDGLTYLLVAICPILYLTGCFV 178 Query: 171 GHRQLTPTELFSAMSAAMALGLVVQIVSI---VRV-LPNLRSVTARFEASRWNKSAFRFW 226 + +F AM+AA + ++VQ+ + VRV PNLR + F+ W + + Sbjct: 179 TGAPIQIHRIFLAMAAAASFAVLVQMALLRRRVRVQFPNLRQSKSTFDLRTWITRSSKLC 238 Query: 227 LASILEAANQYFDVILVYWMLDPATAGVYFAASRLANIFAMLSAALYTF 275 ++S LEAANQY DV+++ ++ P+ AG YF +R+AN FAM++ A+Y F Sbjct: 239 VSSGLEAANQYADVVIIGYLTSPSVAGAYFVTTRIANAFAMVTGAVYIF 287