BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0189.0014.p         (72 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770003.1| hypothetical protein bll3363 [Bradyrhizobium ja...   103   1e-20
ref|YP_568246.1| putative membrane protein involved in export of...    37   0.86 
ref|YP_003193387.1| polysaccharide biosynthesis protein [Desulfo...    37   1.0  
ref|ZP_05115668.1| MatE family [Labrenzia alexandrii DFL-11] >gi...    35   2.7  
ref|ZP_08045689.1| polysaccharide biosynthesis protein [Haladapt...    35   2.9  

>ref|NP_770003.1| hypothetical protein bll3363 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48628.1| bll3363 [Bradyrhizobium japonicum USDA 110]
          Length = 541

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 60/72 (83%)

Query: 1   VALRLLGFVVLIPWLGVLGAAISATGSLVVATVALNVLCRRRTGVDPSILVLSHLWPSKG 60
           VALRL+GF+VLIPWLGVLGAAISAT SL  AT+ALN+LCRRRTGVDPSILVL     SK 
Sbjct: 470 VALRLVGFLVLIPWLGVLGAAISATVSLAFATIALNILCRRRTGVDPSILVLLRFSASKR 529

Query: 61  DAYAVRVADSND 72
            A+AVR ADS D
Sbjct: 530 GAFAVRGADSGD 541


>ref|YP_568246.1| putative membrane protein involved in export of O-antigen
           [Rhodopseudomonas palustris BisB5]
 gb|ABE38345.1| putative membrane protein involved in export of O-antigen
           [Rhodopseudomonas palustris BisB5]
          Length = 450

 Score = 37.0 bits (84), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%)

Query: 1   VALRLLGFVVLIPWLGVLGAAISATGSLVVATVALNVLCRRRTGVDPSILVL 52
           V +R +GF +LIPW G+ GA  + T S +   + L    +   G+D S+L L
Sbjct: 385 VLMRAVGFFLLIPWFGIPGAVAATTISFITLAILLRNAAKSAAGIDGSVLRL 436


>ref|YP_003193387.1| polysaccharide biosynthesis protein [Desulfotomaculum acetoxidans
           DSM 771]
 gb|ACV64764.1| polysaccharide biosynthesis protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 430

 Score = 37.0 bits (84), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 10  VLIPWLGVLGAAISATGSLVVATVALNVLCRRRTGVDP 47
           +LIP  G+ GAA S+TGS+++  V   +   R+ G+ P
Sbjct: 387 ILIPMYGIEGAAFSSTGSIIITNVLRMIFMHRKVGIVP 424


>ref|ZP_05115668.1| MatE family [Labrenzia alexandrii DFL-11]
 gb|EEE46267.1| MatE family [Labrenzia alexandrii DFL-11]
          Length = 472

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 28/44 (63%)

Query: 9   VVLIPWLGVLGAAISATGSLVVATVALNVLCRRRTGVDPSILVL 52
           ++ IPWLG++GAA++ + +++  T AL    +R+  +   IL L
Sbjct: 420 LIFIPWLGLMGAAVATSCAILFETTALAFAAKRKLNITTFILPL 463


>ref|ZP_08045689.1| polysaccharide biosynthesis protein [Haladaptatus paucihalophilus
           DX253]
 gb|EFW90789.1| polysaccharide biosynthesis protein [Haladaptatus paucihalophilus
           DX253]
          Length = 508

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 29/39 (74%)

Query: 9   VVLIPWLGVLGAAISATGSLVVATVALNVLCRRRTGVDP 47
           ++LIP  G++GAA++++G+ VV  +ALNV+   + G+ P
Sbjct: 384 LLLIPTYGMVGAAVASSGAYVVRNLALNVVLLTKCGITP 422