BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0189.0006.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08630146.1| ABC transporter substrate-binding protein [Br... 415 e-114 ref|ZP_08627908.1| ABC transporter substrate-binding protein [Br... 408 e-112 ref|ZP_08629594.1| ABC transporter substrate-binding protein [Br... 403 e-110 ref|YP_001241056.1| putative branched-chain amino acid ABC trans... 387 e-105 ref|YP_001993616.1| branched-chain amino acid ABC transporter su... 325 7e-87 >ref|ZP_08630146.1| ABC transporter substrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07019.1| ABC transporter substrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 399 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 246/310 (79%) Query: 1 VEQTRKLIESDEVAFLFSPLGTPGIGATIKYVTAKKVPHLFVVSGATKFANFTEFPLTTT 60 VE RKL+ESDEVAF+F LGTPG AT KY+T++ VP L +VSG+ KF N +FPLTTT Sbjct: 87 VEHVRKLVESDEVAFMFGQLGTPGNTATAKYLTSRGVPALGIVSGSNKFTNVKDFPLTTT 146 Query: 61 GLPSYNTEGKIYAKYITQTAPDAKIAVLYQNDDLGRDFVAAFKEVLKADFDKKVVTSPYE 120 L S++TEGKIYAKY+ +T P+AK A+LYQNDDLG+D+V AFKE++K +FDK+VVT+ YE Sbjct: 147 SLVSFDTEGKIYAKYLNKTLPNAKYAILYQNDDLGKDYVNAFKELMKGEFDKRVVTAAYE 206 Query: 121 VTEPTIESRVVTLKASGAQAFLIAGTPKFAAQAIKKANETGWSPLTIVNYVSSSVSATIV 180 + +PT++S++V K++GA+A L+AGTPKFAAQAI+KA+E GW PL IVNY SSSV T+ Sbjct: 207 IADPTVDSQIVNFKSAGAEALLVAGTPKFAAQAIRKASEIGWKPLLIVNYPSSSVGGTLK 266 Query: 181 PAGADKAVGVVVATITKDPNDRKWADDSGMKWYRAHFEKYLPGADIGDNNYLFGTQQGQI 240 PAG DK+VGV+ T+TKDP D KW +D GMK YRA +KY+PG DI D NY+FG QG I Sbjct: 267 PAGLDKSVGVIAGTMTKDPTDSKWDNDKGMKDYRAFIDKYMPGVDISDTNYIFGYTQGMI 326 Query: 241 LEQVLKQCGDDLSRENIVKQARNIRGLVLPTLMPGITINTGPDNSMAYTQLQLQRWTGSS 300 LEQ++KQCG+DLSR NI+KQA+N++ + LPT +PG+ +NT + +TQ++LQRWTG + Sbjct: 327 LEQIIKQCGNDLSRANILKQAKNLKNIALPTALPGVLVNTSDTVNQDFTQMRLQRWTGQN 386 Query: 301 WEQFGGVLSA 310 W+QF VL A Sbjct: 387 WDQFSDVLDA 396 >ref|ZP_08627908.1| ABC transporter substrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09437.1| ABC transporter substrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 403 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 187/311 (60%), Positives = 238/311 (76%) Query: 1 VEQTRKLIESDEVAFLFSPLGTPGIGATIKYVTAKKVPHLFVVSGATKFANFTEFPLTTT 60 VE TRKL+ESDEVAF+FS LGTP A KY+ AKK+P F+V+GAT+F ++ E+P+ TT Sbjct: 91 VEHTRKLVESDEVAFMFSTLGTPSNLAIAKYLAAKKIPQAFIVTGATRFTDYKEYPMITT 150 Query: 61 GLPSYNTEGKIYAKYITQTAPDAKIAVLYQNDDLGRDFVAAFKEVLKADFDKKVVTSPYE 120 GLPSY+TE + YA+Y+ + PDAKIA+LYQNDDLG+DFV FK LK FD KVVTS YE Sbjct: 151 GLPSYDTESRAYARYLAKEMPDAKIAILYQNDDLGKDFVNGFKAELKEAFDSKVVTSSYE 210 Query: 121 VTEPTIESRVVTLKASGAQAFLIAGTPKFAAQAIKKANETGWSPLTIVNYVSSSVSATIV 180 V++PTI+S++V+LK+SGA L AGTPKFAAQAI+K +E+GW PL I N +SSS++A + Sbjct: 211 VSQPTIDSQIVSLKSSGATVMLFAGTPKFAAQAIRKTHESGWKPLFITNLISSSIAAVLA 270 Query: 181 PAGADKAVGVVVATITKDPNDRKWADDSGMKWYRAHFEKYLPGADIGDNNYLFGTQQGQI 240 PAG D + GV+ AT KDP+D KWA+D G+K YRA EK++PGAD D+NY G QG I Sbjct: 271 PAGLDISTGVMTATYRKDPDDPKWANDPGVKLYRAFMEKHMPGADHADSNYFTGLHQGVI 330 Query: 241 LEQVLKQCGDDLSRENIVKQARNIRGLVLPTLMPGITINTGPDNSMAYTQLQLQRWTGSS 300 LE +LKQCG+DLSRENI+KQ RNI+GL LP +PGI +NT N+ YTQL LQRW G + Sbjct: 331 LETLLKQCGNDLSRENILKQTRNIKGLALPMSLPGIVVNTSATNNKMYTQLNLQRWNGKA 390 Query: 301 WEQFGGVLSAD 311 W+ GG++ D Sbjct: 391 WDLVGGLIDDD 401 >ref|ZP_08629594.1| ABC transporter substrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08087.1| ABC transporter substrate-binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 397 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/311 (60%), Positives = 235/311 (75%) Query: 1 VEQTRKLIESDEVAFLFSPLGTPGIGATIKYVTAKKVPHLFVVSGATKFANFTEFPLTTT 60 VE TRKLIESDEVAF+F LGTP ATIKY+T KKVP F+ +GATKF + E+PLTTT Sbjct: 87 VEHTRKLIESDEVAFMFGQLGTPSNSATIKYITGKKVPDTFITTGATKFTDSKEYPLTTT 146 Query: 61 GLPSYNTEGKIYAKYITQTAPDAKIAVLYQNDDLGRDFVAAFKEVLKADFDKKVVTSPYE 120 LPSY+TEGK+YAKY P+AK+ +LYQNDDLG+DFV AFK + K +F KVV YE Sbjct: 147 SLPSYDTEGKVYAKYFKAQLPNAKVGILYQNDDLGKDFVNAFKPIYKDEFASKVVALAYE 206 Query: 121 VTEPTIESRVVTLKASGAQAFLIAGTPKFAAQAIKKANETGWSPLTIVNYVSSSVSATIV 180 V +PT++S+VV LKA+ +A LIAGTPKFAAQA++K NE GW PLT+VN+V++S+ T V Sbjct: 207 VADPTVDSQVVNLKAAAPEALLIAGTPKFAAQALRKMNEMGWKPLTLVNFVAASIGNTFV 266 Query: 181 PAGADKAVGVVVATITKDPNDRKWADDSGMKWYRAHFEKYLPGADIGDNNYLFGTQQGQI 240 P G DK GV+ A KD D KW DD G+K + A +KYLPGAD+ D NYL+G QQG I Sbjct: 267 PVGLDKVTGVMTAGFQKDATDPKWKDDQGVKDFTAFAQKYLPGADLSDQNYLYGYQQGMI 326 Query: 241 LEQVLKQCGDDLSRENIVKQARNIRGLVLPTLMPGITINTGPDNSMAYTQLQLQRWTGSS 300 LEQ+LKQ G+DLSRENI+KQ+++ + VLPT +PGI INT P + AYTQ+Q+QRW G S Sbjct: 327 LEQLLKQAGNDLSRENILKQSKSFKDFVLPTTLPGIKINTSPAVNQAYTQMQMQRWNGKS 386 Query: 301 WEQFGGVLSAD 311 W+Q G V+ AD Sbjct: 387 WDQLGDVVKAD 397 >ref|YP_001241056.1| putative branched-chain amino acid ABC transport system substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ37150.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Bradyrhizobium sp. BTAi1] Length = 399 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 236/310 (76%) Query: 1 VEQTRKLIESDEVAFLFSPLGTPGIGATIKYVTAKKVPHLFVVSGATKFANFTEFPLTTT 60 VE RKL+ESDEVAF++ LGT GI AT KY+ K VP + ++SG+ KF N +++PL TT Sbjct: 87 VEHVRKLVESDEVAFMYGQLGTAGISATAKYLRTKGVPSIAIISGSAKFTNVSDYPLITT 146 Query: 61 GLPSYNTEGKIYAKYITQTAPDAKIAVLYQNDDLGRDFVAAFKEVLKADFDKKVVTSPYE 120 GL SY+TEGKIYAKY+T+ P+AK A+LYQNDDLG+D+V AFK L +FD KVV++ YE Sbjct: 147 GLVSYDTEGKIYAKYLTKALPNAKYAILYQNDDLGKDYVNAFKSYLGKNFDSKVVSASYE 206 Query: 121 VTEPTIESRVVTLKASGAQAFLIAGTPKFAAQAIKKANETGWSPLTIVNYVSSSVSATIV 180 V+EPTI+S+V LK+SGA+A +IAGTPKFAAQAI++A GW IVN+ S SV T+ Sbjct: 207 VSEPTIDSQVTNLKSSGAEALVIAGTPKFAAQAIRQAYLIGWKATVIVNFPSGSVGGTLA 266 Query: 181 PAGADKAVGVVVATITKDPNDRKWADDSGMKWYRAHFEKYLPGADIGDNNYLFGTQQGQI 240 PAG DK+VGV+V + KD D W D G++ YRA F+KYL GAD+ + +YL G QQG + Sbjct: 267 PAGLDKSVGVIVGSTNKDALDESWKSDPGVQAYRAFFDKYLQGADLSNGSYLTGYQQGLV 326 Query: 241 LEQVLKQCGDDLSRENIVKQARNIRGLVLPTLMPGITINTGPDNSMAYTQLQLQRWTGSS 300 LEQ+LKQCGDDLSR+NI+ QA+++R V+PT +PG+ +NT +M +TQ++LQRWTGS+ Sbjct: 327 LEQILKQCGDDLSRKNILAQAKSLRDFVVPTALPGVKVNTSETENMIWTQMRLQRWTGSA 386 Query: 301 WEQFGGVLSA 310 WE FG VL A Sbjct: 387 WEAFGDVLDA 396 >ref|YP_001993616.1| branched-chain amino acid ABC transporter substrate-binding protein [Rhodopseudomonas palustris TIE-1] gb|ACF03141.1| putative ABC transporter (substrate-binding protein); putative branched-chain amino acid transporter [Rhodopseudomonas palustris TIE-1] Length = 400 Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 154/310 (49%), Positives = 215/310 (69%), Gaps = 1/310 (0%) Query: 1 VEQTRKLIESDEVAFLFSPLGTPGIGATIKYVTAKKVPHLFVVSGATKFANFTEFPLTTT 60 VEQTR+L+ESDEV+F+FS +GT A KY+ KKVP LFV SGA+KF + +++PL Sbjct: 89 VEQTRRLVESDEVSFIFSTMGTAHNTAIAKYLQNKKVPQLFVASGASKFGDISQYPLAIM 148 Query: 61 GLPS-YNTEGKIYAKYITQTAPDAKIAVLYQNDDLGRDFVAAFKEVLKADFDKKVVTSPY 119 G+ + + E ++YA+Y + PDA AV+ QNDD GRD++A ++VL +DK V S Y Sbjct: 149 GIMAPFRNEARMYARYALEKKPDATFAVIAQNDDFGRDYLAGLRDVLGERYDKAVTASMY 208 Query: 120 EVTEPTIESRVVTLKASGAQAFLIAGTPKFAAQAIKKANETGWSPLTIVNYVSSSVSATI 179 EVT+PTI+S++V+LKASGA A +IA TPKFAAQAI+K E GW P+ ++ VS +S+ + Sbjct: 209 EVTDPTIDSQIVSLKASGADALIIAATPKFAAQAIRKTFEIGWKPMRFLSNVSVWMSSVM 268 Query: 180 VPAGADKAVGVVVATITKDPNDRKWADDSGMKWYRAHFEKYLPGADIGDNNYLFGTQQGQ 239 PAG D VG++ KDP D WA+D G+K +RA+ +KY+P D+ D+NY+ G G Sbjct: 269 EPAGVDAGVGIISTAYVKDPLDPAWANDPGVKDWRAYMQKYIPDGDLRDSNYVNGYNNGM 328 Query: 240 ILEQVLKQCGDDLSRENIVKQARNIRGLVLPTLMPGITINTGPDNSMAYTQLQLQRWTGS 299 +LE VLK G+DLSR+NI+KQA +I+ L LP L+PGI + T D+ + Q+Q R+TG Sbjct: 329 VLEHVLKAAGNDLSRDNIMKQALSIKELELPMLLPGIKVQTAADDHLPIEQVQFMRFTGK 388 Query: 300 SWEQFGGVLS 309 WE+FG V S Sbjct: 389 QWERFGEVRS 398