BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0188.0008.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_571021.1| hypothetical protein RPD_3899 [Rhodopseudomonas... 454 e-126 ref|YP_001205444.1| hypothetical protein BRADO3429 [Bradyrhizobi... 446 e-123 ref|YP_001240233.1| hypothetical protein BBta_4276 [Bradyrhizobi... 446 e-123 ref|YP_484944.1| hypothetical protein RPB_1323 [Rhodopseudomonas... 439 e-121 ref|NP_769621.1| hypothetical protein blr2981 [Bradyrhizobium ja... 402 e-110 >ref|YP_571021.1| hypothetical protein RPD_3899 [Rhodopseudomonas palustris BisB5] gb|ABE41120.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 281 Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust. Identities = 212/280 (75%), Positives = 244/280 (87%) Query: 1 MTLPELAADALGKFLGEYMQRRFGSSQTQLVEMVPSIARIALECIGNSDALYHNVEHTML 60 +T+P LAADALG FLG+YM++R+G+S+ L E+VPS+ARIALECIGNSDALYHNVEHTML Sbjct: 2 ITVPALAADALGNFLGKYMRKRYGASEAHLTEIVPSVARIALECIGNSDALYHNVEHTML 61 Query: 61 VTLAGHDILRGRALHSHMSAEDYAHVIIACLTHDIGYVRGLFEADGQDGYLVDADGRKII 120 VTLAGH ILRGRALH+HM AEDYAH+II CLTHDIGYVRGLFEADG+DGY+V DGRK+ Sbjct: 62 VTLAGHHILRGRALHTHMPAEDYAHLIIGCLTHDIGYVRGLFEADGEDGYVVGTDGRKVT 121 Query: 121 LPRGSSDAALMSHHVDRSKIFVMERLKGVTLLDKERIVRAIEGTRFPLSAPDDDEDFGEE 180 LPRG+SDA+++ HVDRSK+FV+ER+ G+ LD +RI AIEGTRFP P D E EE Sbjct: 122 LPRGASDASMLPWHVDRSKLFVLERIGGIAQLDAKRIACAIEGTRFPPQMPLDGECCEEE 181 Query: 181 ATLLRAADLIGQLGDPHYIRKANALYVEFEEAGLNRQLGYDSPADLVDRYPRFYWDSVAP 240 A LLRAADLIGQLGDP YIRK NALY EFEEAGLNRQLGY SPADL++ YP+FYW++VAP Sbjct: 182 AALLRAADLIGQLGDPAYIRKTNALYYEFEEAGLNRQLGYGSPADLINLYPQFYWNNVAP 241 Query: 241 HVQKAIRYLNITSSGRQWIANLYSNVFRAERDISLSGPQK 280 H+Q AIRYLN+T+ GRQWIANLYSNVFRAERDI LSGPQK Sbjct: 242 HIQTAIRYLNVTAGGRQWIANLYSNVFRAERDIRLSGPQK 281 >ref|YP_001205444.1| hypothetical protein BRADO3429 [Bradyrhizobium sp. ORS 278] emb|CAL77217.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 278 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 207/280 (73%), Positives = 246/280 (87%), Gaps = 3/280 (1%) Query: 1 MTLPELAADALGKFLGEYMQRRFGSSQTQLVEMVPSIARIALECIGNSDALYHNVEHTML 60 MTLPELAA AL +FL YM+RRFGSS TQL EM+P+ AR+ALECIGNSDALYHNVEHT+L Sbjct: 2 MTLPELAAAALERFLSSYMRRRFGSSHTQLSEMLPAAARVALECIGNSDALYHNVEHTLL 61 Query: 61 VTLAGHDILRGRALHSHMSAEDYAHVIIACLTHDIGYVRGLFEADGQDGYLVDADGRKII 120 VTLAGH+ILRGRALHSH++AEDY HVI+ACL HDIGYVRGLF+ D DG+++D GRK+ Sbjct: 62 VTLAGHEILRGRALHSHITAEDYVHVIMACLLHDIGYVRGLFKEDDSDGFVIDGSGRKVC 121 Query: 121 LPRGSSDAALMSHHVDRSKIFVMERLKGVTLLDKERIVRAIEGTRFPLSAPDDDEDFGEE 180 LPRGSSDA+LM +HVDRSK++V+ R++G+ LDK+RI RAIEGTRFP P + F EE Sbjct: 122 LPRGSSDASLMQYHVDRSKLYVINRIEGMAPLDKDRIARAIEGTRFP---PLAGQQFDEE 178 Query: 181 ATLLRAADLIGQLGDPHYIRKANALYVEFEEAGLNRQLGYDSPADLVDRYPRFYWDSVAP 240 +++RAADLIGQLGDP+YIRKANALY EFEE G+NRQLGY+SPAD+V+RYP+FYW+SVAP Sbjct: 179 QSIVRAADLIGQLGDPNYIRKANALYHEFEEVGINRQLGYESPADIVNRYPQFYWNSVAP 238 Query: 241 HVQKAIRYLNITSSGRQWIANLYSNVFRAERDISLSGPQK 280 H+Q IRYLN+TS+GRQWIANLY+NVFRAERDISLSGPQ Sbjct: 239 HIQTEIRYLNMTSTGRQWIANLYANVFRAERDISLSGPQS 278 >ref|YP_001240233.1| hypothetical protein BBta_4276 [Bradyrhizobium sp. BTAi1] gb|ABQ36327.1| hypothetical protein BBta_4276 [Bradyrhizobium sp. BTAi1] Length = 278 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 211/279 (75%), Positives = 245/279 (87%), Gaps = 3/279 (1%) Query: 1 MTLPELAADALGKFLGEYMQRRFGSSQTQLVEMVPSIARIALECIGNSDALYHNVEHTML 60 MTLPELAA AL +FL YM+RRFGSSQTQL E +P+ ARIALECIGNSDALYHNVEHT+L Sbjct: 2 MTLPELAAAALEQFLSSYMRRRFGSSQTQLSEFLPAAARIALECIGNSDALYHNVEHTLL 61 Query: 61 VTLAGHDILRGRALHSHMSAEDYAHVIIACLTHDIGYVRGLFEADGQDGYLVDADGRKII 120 VTLAGH+ILRGRALHSHM+A+DY HVI+ACL HDIGYVRGLF D DG++VD GRKI Sbjct: 62 VTLAGHEILRGRALHSHMTADDYVHVIMACLLHDIGYVRGLFREDDADGFVVDPAGRKIC 121 Query: 121 LPRGSSDAALMSHHVDRSKIFVMERLKGVTLLDKERIVRAIEGTRFPLSAPDDDEDFGEE 180 LPRGSSDA+LM++HVDRSK++V+ R++G+ LDK+RI RAIEGTRFP P + F EE Sbjct: 122 LPRGSSDASLMAYHVDRSKLYVINRIEGMAPLDKDRIARAIEGTRFP---PLAGQQFDEE 178 Query: 181 ATLLRAADLIGQLGDPHYIRKANALYVEFEEAGLNRQLGYDSPADLVDRYPRFYWDSVAP 240 +++RAADLIGQLGDP+YIRKANALY EFEE G+NRQLGYDSPAD+V RYP+FYW+SVAP Sbjct: 179 QSIVRAADLIGQLGDPNYIRKANALYHEFEEVGINRQLGYDSPADIVHRYPQFYWNSVAP 238 Query: 241 HVQKAIRYLNITSSGRQWIANLYSNVFRAERDISLSGPQ 279 H+Q IRYLN+TS+GRQWIANLY+NVFRAERDISLSGPQ Sbjct: 239 HIQTEIRYLNMTSTGRQWIANLYANVFRAERDISLSGPQ 277 >ref|YP_484944.1| hypothetical protein RPB_1323 [Rhodopseudomonas palustris HaA2] gb|ABD06033.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 281 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 206/280 (73%), Positives = 241/280 (86%) Query: 1 MTLPELAADALGKFLGEYMQRRFGSSQTQLVEMVPSIARIALECIGNSDALYHNVEHTML 60 +T+P LAADALG FLG+YM+RR+G+S+ L E+VPS+AR+ LECIGNSDALYHNVEHTML Sbjct: 2 ITIPALAADALGGFLGDYMRRRYGASEAHLAEVVPSVARMTLECIGNSDALYHNVEHTML 61 Query: 61 VTLAGHDILRGRALHSHMSAEDYAHVIIACLTHDIGYVRGLFEADGQDGYLVDADGRKII 120 VTLAGH ILRGRAL++H+ AEDYAH+II CLTHDIGYVRGLFEADG+DGY++DA GRK Sbjct: 62 VTLAGHHILRGRALYTHVPAEDYAHLIIGCLTHDIGYVRGLFEADGEDGYVIDAGGRKKT 121 Query: 121 LPRGSSDAALMSHHVDRSKIFVMERLKGVTLLDKERIVRAIEGTRFPLSAPDDDEDFGEE 180 LPRG+SDA+++ HVDRSK+FV +R+ + LD RI AIEGTRFP P D E GE+ Sbjct: 122 LPRGASDASMLPWHVDRSKLFVTQRIGAIAGLDAARIACAIEGTRFPPQVPADGEQCGED 181 Query: 181 ATLLRAADLIGQLGDPHYIRKANALYVEFEEAGLNRQLGYDSPADLVDRYPRFYWDSVAP 240 A LLRAADLIGQLGDP YIRKANALY EFEE+GLNR+LGY SPADL++ YP+FYW+SVAP Sbjct: 182 AALLRAADLIGQLGDPAYIRKANALYYEFEESGLNRRLGYGSPADLINLYPQFYWNSVAP 241 Query: 241 HVQKAIRYLNITSSGRQWIANLYSNVFRAERDISLSGPQK 280 HVQ AIRYLN T+ G+QWIA+LYSNVFRAERDI LSGPQK Sbjct: 242 HVQTAIRYLNATAGGQQWIASLYSNVFRAERDIRLSGPQK 281 >ref|NP_769621.1| hypothetical protein blr2981 [Bradyrhizobium japonicum USDA 110] dbj|BAC48246.1| blr2981 [Bradyrhizobium japonicum USDA 110] Length = 290 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/280 (67%), Positives = 229/280 (81%), Gaps = 6/280 (2%) Query: 1 MTLPELAADALGKFLGEYMQRRFGSSQTQLVEMVPSIARIALECIGNSDALYHNVEHTML 60 +TLP LAA++L K LG +M+RR+ + +VE S R A+ECIGNSDALYHN+EHTML Sbjct: 17 ITLPRLAAESLEKLLGTFMRRRYDETSASIVE---SATRTAMECIGNSDALYHNIEHTML 73 Query: 61 VTLAGHDILRGRALHSHMSAEDYAHVIIACLTHDIGYVRGLFEADGQDGYLVDADGRKII 120 VTLAGH IL GR+LH+H+SA DY H++IACL HDIGYVRGLFE D DG+++DA KI Sbjct: 74 VTLAGHSILSGRSLHTHLSAADYVHILIACLAHDIGYVRGLFEEDDVDGFVIDAADTKIC 133 Query: 121 LPRGSSDAALMSHHVDRSKIFVMERLKGVTLLDKERIVRAIEGTRFPLSAPDDDEDFGEE 180 LPRG+SDA+LM +HVDRSK++V RL+ + LD ERI RAIEGTRFP + +D+ +E Sbjct: 134 LPRGASDASLMMYHVDRSKLYVTRRLRHIPGLDPERIARAIEGTRFPAR---EGQDYDDE 190 Query: 181 ATLLRAADLIGQLGDPHYIRKANALYVEFEEAGLNRQLGYDSPADLVDRYPRFYWDSVAP 240 A++LRAAD IGQLGDP+Y+RKANALY EFEE G+NRQLGYDSPAD+V+RYP+FYW+SVAP Sbjct: 191 ASILRAADFIGQLGDPNYLRKANALYYEFEEVGMNRQLGYDSPADIVNRYPQFYWNSVAP 250 Query: 241 HVQKAIRYLNITSSGRQWIANLYSNVFRAERDISLSGPQK 280 H+Q I YLN T GRQWIANLYSNVFRAERDISLSGPQK Sbjct: 251 HIQTEIGYLNKTEIGRQWIANLYSNVFRAERDISLSGPQK 290