BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0188.0006.p (206 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773698.1| transcriptional regulator [Bradyrhizobium japon... 264 7e-69 ref|YP_004751343.1| transcriptional regulatory protein [Collimon... 207 8e-52 ref|ZP_06974578.1| transcriptional regulator, TetR family [Ktedo... 151 5e-35 ref|ZP_06974923.1| transcriptional regulator, TetR family [Ktedo... 129 3e-28 ref|YP_482024.1| TetR family transcriptional regulator [Frankia ... 72 7e-11 >ref|NP_773698.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC52323.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 210 Score = 264 bits (674), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 133/197 (67%), Positives = 156/197 (79%), Gaps = 1/197 (0%) Query: 1 MPPRSYVSPARSAARRQTRERVIEAASRTLR-DESIARFSLDTVAKAAGVTRLTVYNQFG 59 MP RSYVS R++A +TRER+I A +R LR D SIA FSLD VAKAAGVTRLTVYNQFG Sbjct: 1 MPKRSYVSSVRASAAAETRERIIAAGARLLRKDASIANFSLDVVAKAAGVTRLTVYNQFG 60 Query: 60 SRRGLLEAVFDEIARHGGLQQLADAMTMADPRAALDRMVEIFCGFWSRDSAVGRLHDAMA 119 SRRGLLEAVFD+IAR GGL +LAD M + DPRAALDR+V IFC FW+ D A+G L+ A+A Sbjct: 61 SRRGLLEAVFDDIARQGGLFELADVMALPDPRAALDRVVAIFCTFWAHDPAIGGLNQAIA 120 Query: 120 TDPEFAEAVRERNERRRRGVTALIDRIAGKRASPQARKDAVDLIFALTSYPTFASLSAGR 179 TDPEF A+ RNERRR VT L+ RI RA+ +A +DAVDLIF LTSYPTFA+LS R Sbjct: 121 TDPEFGNALVARNERRRELVTGLVTRITESRAAKRAMQDAVDLIFVLTSYPTFAALSPQR 180 Query: 180 SGDEVCRVVQAACHAAL 196 S +EVCR++Q ACHAA+ Sbjct: 181 STEEVCRLLQTACHAAV 197 >ref|YP_004751343.1| transcriptional regulatory protein [Collimonas fungivorans Ter331] gb|AEK60520.1| transcriptional regulatory protein [Collimonas fungivorans Ter331] Length = 205 Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 108/197 (54%), Positives = 138/197 (70%), Gaps = 1/197 (0%) Query: 1 MPPRSYVSPARSAARRQTRERVIEAASRTLRDE-SIARFSLDTVAKAAGVTRLTVYNQFG 59 MP RSYVS R+ A + R RV+EAA++ LR+E SI FSL+ VAKAAGVTRLTVYNQFG Sbjct: 1 MPKRSYVSSVRADAAAEKRSRVVEAATQLLREEHSITAFSLEAVAKAAGVTRLTVYNQFG 60 Query: 60 SRRGLLEAVFDEIARHGGLQQLADAMTMADPRAALDRMVEIFCGFWSRDSAVGRLHDAMA 119 SR+GLLEAVFD+IAR G + +L +A DPR LD + EIFC FWS D A+GRL DAM Sbjct: 61 SRQGLLEAVFDDIARRGRIMRLGEAWAAPDPRLGLDLLAEIFCEFWSSDPAIGRLQDAML 120 Query: 120 TDPEFAEAVRERNERRRRGVTALIDRIAGKRASPQARKDAVDLIFALTSYPTFASLSAGR 179 DP+ A+A+ ER R R+ + AL+ R+A RA+ ++D DLIF LT + F L+ GR Sbjct: 121 VDPDIAQALGERLGRGRQIIGALVGRLAEGRATAAQQRDTADLIFGLTGFAMFRLLAPGR 180 Query: 180 SGDEVCRVVQAACHAAL 196 S + VC +V+ AC A+ Sbjct: 181 SAEAVCLLVKTACGDAI 197 >ref|ZP_06974578.1| transcriptional regulator, TetR family [Ktedonobacter racemifer DSM 44963] gb|EFH82645.1| transcriptional regulator, TetR family [Ktedonobacter racemifer DSM 44963] Length = 206 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 87/202 (43%), Positives = 120/202 (59%), Gaps = 5/202 (2%) Query: 1 MPPRSYVSPARSAARRQTRERVIEAASRTLR-DESIARFSLDTVAKAAGVTRLTVYNQFG 59 M PR Y R AA QTR R++ AA L DE I+ FS+D VA+ A V R+TVY+QFG Sbjct: 1 MSPRPYRLGQRQAATEQTRNRILIAARELLMLDEGISGFSIDAVARQADVARMTVYHQFG 60 Query: 60 SRRGLLEAVFDEIARHGGLQQLADAMTMADPRAALDRMVEIFCGFWSRDSAVG-RLHDAM 118 S+ GLLEA+ D +A GG++QLA A DP ALD + +F FW D V RL Sbjct: 61 SKTGLLEALCDSLATSGGMEQLASAFRQVDPFEALDTYIAVFARFWQADRLVTRRLRGLA 120 Query: 119 ATDPEFAEAVRERNERRRRGVTALIDRIAGKRASPQAR--KDAVDLIFALTSYPTFASLS 176 A DPEF + +R R+ERRR+G+ L+ R +++ P R +D V++++ L S+ F +L+ Sbjct: 121 ALDPEFEQVIRARDERRRKGLHVLVQRFGEQQSLPAFRPHEDIVNMLYTLLSFECFDTLA 180 Query: 177 A-GRSGDEVCRVVQAACHAALA 197 R +EV +Q HA LA Sbjct: 181 GPARPIEEVVPAIQRLVHATLA 202 >ref|ZP_06974923.1| transcriptional regulator, TetR family [Ktedonobacter racemifer DSM 44963] gb|EFH82990.1| transcriptional regulator, TetR family [Ktedonobacter racemifer DSM 44963] Length = 240 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 111/203 (54%), Gaps = 11/203 (5%) Query: 1 MPPRSYVSPARSAARRQTRERVIEAASRTLR-DESIARFSLDTVAKAAGVTRLTVYNQFG 59 M PR Y R A QTR R+I AA L +S + FSLD VA+ A V R TVY+QFG Sbjct: 35 MSPRPYRLGQRQVANEQTRSRIINAARELLMAYDSFSTFSLDAVARRADVVRATVYHQFG 94 Query: 60 SRRGLLEAVFDEIARHGGLQQLADAMTMADPRAALDRMVEIFCGFWSRDSAVG-RLHDAM 118 ++ GLLEA+ D +A GG++QLA DP L + F FW D V RL Sbjct: 95 TKAGLLEALSDSLAASGGMEQLATVFRHPDPLDVLTHYILAFSRFWDADRLVTRRLRALA 154 Query: 119 ATDPEFAEAVRERNERRRRGVTALIDRIAGKR--ASPQARKDAVDLIFALTSYPTFASLS 176 A D +F +R R+ERRR+GV ++ R+ K+ A Q+ +A D +F L S+ TF +L Sbjct: 155 ALDADFERVIRARDERRRQGVKVILQRLGEKQMLAPTQSLDEAADTLFTLISFETFDTL- 213 Query: 177 AGRS------GDEVCRVVQAACH 193 AG+ +VC +V AA H Sbjct: 214 AGKERSMLEVAPQVCSLVCAALH 236 >ref|YP_482024.1| TetR family transcriptional regulator [Frankia sp. CcI3] gb|ABD12295.1| transcriptional regulator, TetR family [Frankia sp. CcI3] Length = 193 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 19/204 (9%) Query: 1 MPPRSYVSPARSAARRQTRERVIEAASRTLRDESIARF-SLDTVAKAAGVTRLTVYNQFG 59 M PR Y R+A QTR R+++A E + R S++ VA+ AGV R TVY FG Sbjct: 1 MSPRRYEQRLRTAGADQTRRRILDAMY-----EQLPRLASVEAVARQAGVARSTVYLVFG 55 Query: 60 SRRGLLEAVFDEIARHGGLQQLADAMTMADP----RAALDRMVEIFCGFWSRDSAVGRLH 115 SR GL +A+ ++ GG L A+ DP R + V ++ G RD+ L Sbjct: 56 SRAGLFDALTQDVLDRGGFADLVRAVQDPDPLVHLRGGITASVRVYAG--QRDA----LW 109 Query: 116 DAMATDPEFAEAVRERNERRRRGVTALIDRIAGKRASPQARKDAVDLIFALTSYPTFASL 175 + + A++ + R G+ L +R+A AVD+++ LTS+ F L Sbjct: 110 ALRSMEQALDGALQRAEQDRLGGMEHLAERLAAHGLLRVPVAAAVDVLWLLTSFDAFDLL 169 Query: 176 SAGR--SGDEV-CRVVQAACHAAL 196 GR S DEV R++ A HA L Sbjct: 170 YTGRRLSVDEVAARLLATAEHALL 193