BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0188.0004.p         (85 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773697.1| hypothetical protein bll7057 [Bradyrhizobium ja...    65   3e-09
ref|YP_004613542.1| hypothetical protein Mesop_5029 [Mesorhizobi...    63   2e-08
ref|YP_004143717.1| hypothetical protein Mesci_4558 [Mesorhizobi...    61   7e-08
ref|NP_108418.1| hypothetical protein mll8293 [Mesorhizobium lot...    55   3e-06
ref|YP_004751344.1| hypothetical protein CFU_0686 [Collimonas fu...    49   3e-04

>ref|NP_773697.1| hypothetical protein bll7057 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52322.1| bll7057 [Bradyrhizobium japonicum USDA 110]
          Length = 134

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 57/84 (67%)

Query: 1   VTGATLWRLVHEGSFGLSEQILAGGAIAALAAIAVQIIVGGGAVRQLCSSTGDTSAARSR 60
           +TG  L  LVH GSFG +EQ+LA GA+ AL A  VQ   G  A+  L   T + +  RSR
Sbjct: 50  LTGGYLGHLVHSGSFGAAEQVLALGAVCALIAAGVQAATGPRALLSLRRGTSEATNVRSR 109

Query: 61  LAVAQRIAAGLLAVTALCMGAARY 84
           +A AQR+AA LLA+TALCMGAARY
Sbjct: 110 IATAQRVAAALLAITALCMGAARY 133


>ref|YP_004613542.1| hypothetical protein Mesop_5029 [Mesorhizobium opportunistum
           WSM2075]
 gb|AEH89448.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 135

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 1   VTGATLWRLVHEGSFGLSEQILAGGAIAALAAIAVQIIVGGGAVRQLCSSTGDT-SAARS 59
           +TG  LW   HEG+FG  E++LA G + AL A  VQ  + G A RQL  +   T S  R+
Sbjct: 50  LTGILLWYFFHEGAFGSMEKVLALGIVTALIAAGVQGALVGSASRQLAGADAATESRLRA 109

Query: 60  RLAVAQRIAAGLLAVTALCMGAAR 83
           ++   +RIA GLL +T LCM  AR
Sbjct: 110 KMTRGERIAGGLLVLTVLCMATAR 133


>ref|YP_004143717.1| hypothetical protein Mesci_4558 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gb|ADV13667.1| hypothetical protein Mesci_4558 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 135

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 1   VTGATLWRLVHEGSFGLSEQILAGGAIAALAAIAVQIIVGGGAVRQLCSSTGDTS-AARS 59
           +TG  LW   HEG FG  E++LA G + AL A  VQ  + G A RQL  +   T    R+
Sbjct: 50  LTGILLWYFFHEGVFGSMEKVLALGIVTALIAAGVQGALVGSASRQLAGADAATERQLRA 109

Query: 60  RLAVAQRIAAGLLAVTALCMGAAR 83
           ++   +RIA GLL +T LCM  AR
Sbjct: 110 KMTRGERIAGGLLVLTVLCMATAR 133


>ref|NP_108418.1| hypothetical protein mll8293 [Mesorhizobium loti MAFF303099]
 dbj|BAB53879.1| mll8293 [Mesorhizobium loti MAFF303099]
          Length = 135

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 1   VTGATLWRLVHEGSFGLSEQILAGGAIAALAAIAVQIIVGGGAVRQLCSSTGDTSA-ARS 59
           +TGA LW   H   FG  E +LA G +AA AA  V   +     RQL  +  +     R+
Sbjct: 50  LTGALLWYFFHGAYFGSMEMVLALGILAAFAAAGVLGAMVRAPSRQLAGANAEIETRLRA 109

Query: 60  RLAVAQRIAAGLLAVTALCMGAAR 83
           R+A+ +RIAA LL VT LCM  AR
Sbjct: 110 RMAMGERIAAWLLVVTVLCMAIAR 133


>ref|YP_004751344.1| hypothetical protein CFU_0686 [Collimonas fungivorans Ter331]
 gb|AEK60521.1| hypothetical protein CFU_0686 [Collimonas fungivorans Ter331]
          Length = 135

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 49/85 (57%)

Query: 1   VTGATLWRLVHEGSFGLSEQILAGGAIAALAAIAVQIIVGGGAVRQLCSSTGDTSAARSR 60
           +TG  LW  +H G  G  E+ILA GA  AL A  +Q ++ G AV +L         AR+R
Sbjct: 49  LTGVYLWHTLHAGEPGPGERILAIGAGCALLAFVLQGLLAGPAVWKLSKGASGEGGARTR 108

Query: 61  LAVAQRIAAGLLAVTALCMGAARYA 85
           + V  R AA LLAV A+ MGA RYA
Sbjct: 109 ILVGYRAAALLLAVAAIAMGAFRYA 133