BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0187.0026.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002498015.1| family 1 extracellular solute-binding protei... 140 2e-31 dbj|BAK13299.1| molybdate-binding periplasmic protein precursor ... 137 1e-30 ref|YP_003518353.1| ModA [Pantoea ananatis LMG 20103] >gi|291150... 136 4e-30 ref|YP_004155867.1| family 1 extracellular solute-binding protei... 135 8e-30 ref|NP_771437.1| hypothetical protein blr4797 [Bradyrhizobium ja... 133 3e-29 >ref|YP_002498015.1| family 1 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gb|ACL57712.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] Length = 263 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/230 (40%), Positives = 128/230 (55%), Gaps = 3/230 (1%) Query: 22 IKVIISGGFASVYRDVLPEFERSTGISVETGSGASEGTGPKTIRHQLANGTKADVVILSR 81 ++V+ SGGFA+ YR + PEFER TG + T G S G P+ + +LA G DVVI+ Sbjct: 28 VRVVSSGGFAAAYRALAPEFERRTGHGLVTEWGPSMGQTPQAVPARLARGEPIDVVIMVG 87 Query: 82 EGLRSLTEDGRIRAGSEAGLATAPLAAAVRAGSRKPDIGNDIALRKALIDAGQVVAPSST 141 L L G++ A S LA + +A AVRAG+ KPDI + LR+ L+ A + S Sbjct: 88 YALDDLIRQGKVSADSRTALARSGIALAVRAGAPKPDISSIDGLRRTLLAAKSIAYSDSA 147 Query: 142 SGQYVRDKVFPRLNLPDTVRLTLEARGTE-AAEVLRAGKANLSIGPTSELVQESGIEVVG 200 SG Y+ ++F RL + D V+ E V+ G+A + SEL GIE+VG Sbjct: 148 SGVYIETELFRRLGIADAVKAKARMIPAEPVGAVVARGEAEVGFQQLSELKPVPGIEIVG 207 Query: 201 LLPPDLQLVQTFTAAIVSDAQAPEAAKRLIDFLSLDSDILLAAIKRAGME 250 LLP ++QL F+A V ++APEAA LI FL+ S AI+ +GME Sbjct: 208 LLPAEVQLYTEFSAGRVEGSRAPEAASALIGFLA--SPDAAGAIRESGME 255 >dbj|BAK13299.1| molybdate-binding periplasmic protein precursor ModA [Pantoea ananatis AJ13355] Length = 268 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 1/216 (0%) Query: 20 QTIKVIISGGFASVYRDVLPEFERSTGISVETGSGASEGTGPKTIRHQLANGTKADVVIL 79 + + V+ISGGF + + P+FE +G + SG S G P+ I ++LA G KADVVI+ Sbjct: 24 KDVTVMISGGFKAALEKLTPQFEAKSGDKIILVSGPSMGKTPQAIPNRLARGEKADVVIM 83 Query: 80 SREGLRSLTEDGRIRAGSEAGLATAPLAAAVRAGSRKPDIGNDIALRKALIDAGQVVAPS 139 + L L +D I+ GS LA +P+ V+ G KPDI D LRK L++A + Sbjct: 84 VGDALSQLEKDRWIKPGSRVELADSPIGIVVKKGDAKPDIKTDDTLRKTLLNAKSIAYSD 143 Query: 140 STSGQYVRDKVFPRLNLPDTVR-LTLEARGTEAAEVLRAGKANLSIGPTSELVQESGIEV 198 S SGQYV +++F +L + D V+ E A + G L SEL+ G+ Sbjct: 144 SASGQYVSNQLFKKLGIEDKVKGKAHEVERIPVASEVAKGHYALGFQQVSELLPVPGVTF 203 Query: 199 VGLLPPDLQLVQTFTAAIVSDAQAPEAAKRLIDFLS 234 VG LP D+Q + F A+ + A+ PE K L+DFL+ Sbjct: 204 VGELPDDVQYITRFAGAVPAKAEHPEEGKALLDFLA 239 >ref|YP_003518353.1| ModA [Pantoea ananatis LMG 20103] gb|ADD75225.1| ModA [Pantoea ananatis LMG 20103] Length = 268 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 117/216 (54%), Gaps = 1/216 (0%) Query: 20 QTIKVIISGGFASVYRDVLPEFERSTGISVETGSGASEGTGPKTIRHQLANGTKADVVIL 79 + + V+ISGGF + + P+FE +G + SG S G P+ I ++LA G KADVVI+ Sbjct: 24 KDVTVMISGGFKAALEKLTPQFEAKSGDKIILVSGPSMGKTPQAIPNRLARGEKADVVIM 83 Query: 80 SREGLRSLTEDGRIRAGSEAGLATAPLAAAVRAGSRKPDIGNDIALRKALIDAGQVVAPS 139 + L L +D I+ GS LA +P+ V+ G KPDI D LRK L++A + Sbjct: 84 VGDALSQLEKDRWIKPGSRVELADSPIGIVVKKGDAKPDIKTDDTLRKTLLNAKSIAYSD 143 Query: 140 STSGQYVRDKVFPRLNLPDTVR-LTLEARGTEAAEVLRAGKANLSIGPTSELVQESGIEV 198 S SGQYV +++F +L + D V+ E A + G L SEL+ G+ Sbjct: 144 SASGQYVSNQLFKKLGIEDKVKGKAHEVERIPVASEVAKGHYALGFQQVSELLPVPGVTF 203 Query: 199 VGLLPPDLQLVQTFTAAIVSDAQAPEAAKRLIDFLS 234 VG LP D+Q + F A+ + A+ PE + L+DFL+ Sbjct: 204 VGELPDDVQYITRFAGAVPAKAEHPEEGRALLDFLA 239 >ref|YP_004155867.1| family 1 extracellular solute-binding protein [Variovorax paradoxus EPS] gb|ADU37756.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 272 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 88/234 (37%), Positives = 130/234 (55%), Gaps = 11/234 (4%) Query: 22 IKVIISGGFASVYRDVLPEFERSTGISVETGSGASEGTGPKTIRHQLANGTKADVVILSR 81 I V+ SGGF + Y D+ PEFERS+G SV+T GAS G +I +LA ADVVIL+R Sbjct: 40 IHVMTSGGFTAAYNDLRPEFERSSGRSVKTAYGASMGNAQDSIPSRLARNEPADVVILAR 99 Query: 82 EGLRSLTEDGRIRAGSEAGLATAPLAAAVRAGSRKPDIGNDIALRKALIDAGQVVAPSST 141 L L G++ GS+ L + + AVR G+ KPDI AL++ LI A + +S Sbjct: 100 PALDDLVAKGKVVPGSQVDLVRSAIGFAVRKGAPKPDISTVDALKRTLIAAPSIAYSASA 159 Query: 142 SGQYVRDKVFPRLNLPDTV-----RLTLEARGTEAAEVLRAGKANLSIGPTSELVQESGI 196 SG Y ++ +L + D V R+ E GT ++ G A L + SEL+ +GI Sbjct: 160 SGTYYETELLKKLGIEDQVKPKSKRILSERVGT----IVARGDAALGLQQVSELLPIAGI 215 Query: 197 EVVGLLPPDLQLVQTFTAAIVSDAQAPEAAKRLIDFLSLDSDILLAAIKRAGME 250 + +G LP ++Q F+A I + ++ PEAA++LI + L+S I + G+E Sbjct: 216 DYIGPLPAEVQQNTVFSAGIATASKQPEAARQLIRY--LNSPAAAPTIAKTGLE 267 >ref|NP_771437.1| hypothetical protein blr4797 [Bradyrhizobium japonicum USDA 110] dbj|BAC50062.1| blr4797 [Bradyrhizobium japonicum USDA 110] Length = 269 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/216 (37%), Positives = 126/216 (58%), Gaps = 5/216 (2%) Query: 22 IKVIISGGFASVYRDVLPEFERSTGISVETGSGASEGTGPKTIRHQLANGTKADVVILSR 81 ++V+ISGG + Y+ ++PEFE++TG V T G S GT I +L G ADV+I+ Sbjct: 34 VRVMISGGLTAAYQALVPEFEKATGNKVLTAFGPSMGTTTNAIPVRLERGEPADVLIMVG 93 Query: 82 EGLRSLTEDGRIRAGSEAGLATAPLAAAVRAGSRKPDIGNDIALRKALIDAGQVVAPSST 141 L L G++ AGS+ L +P+ AV++G+ KPDI + A+++AL+ A + S Sbjct: 94 YALNDLASKGKVVAGSQVDLTRSPIGIAVKSGAPKPDISSVEAVKRALLAAKTIAYSDSA 153 Query: 142 SGQYVRDKVFPRLNLPDTVRLTLEAR---GTEAAEVLRAGKANLSIGPTSELVQESGIEV 198 SG YV ++F +L + D ++ +AR T E++ G+A L SEL GI++ Sbjct: 154 SGVYVSTEMFDKLGIADVMK--DKARKIPATPVGEIVAHGEAELGFQQISELKPVKGIDI 211 Query: 199 VGLLPPDLQLVQTFTAAIVSDAQAPEAAKRLIDFLS 234 VG LP +LQ + F+A I + ++ PEA + LI FL+ Sbjct: 212 VGPLPSELQKITIFSAGIATVSKEPEAGRALIKFLA 247