BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0187.0025.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773120.1| hypothetical protein bll6480 [Bradyrhizobium ja... 332 3e-89 ref|YP_001207437.1| hypothetical protein BRADO5546 [Bradyrhizobi... 306 2e-81 ref|YP_001241898.1| hypothetical protein BBta_6065 [Bradyrhizobi... 302 3e-80 ref|YP_577956.1| hypothetical protein Nham_2717 [Nitrobacter ham... 283 1e-74 ref|YP_533100.1| hypothetical protein RPC_3239 [Rhodopseudomonas... 282 4e-74 >ref|NP_773120.1| hypothetical protein bll6480 [Bradyrhizobium japonicum USDA 110] dbj|BAC51745.1| bll6480 [Bradyrhizobium japonicum USDA 110] Length = 234 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 158/231 (68%), Positives = 186/231 (80%) Query: 1 MQSPLICRVTALDLALQRRPWPFADQRRAEIDAHFAEQQRLNPNLWNGRVLLGRDPVFAG 60 M SP+I RVT LDLA++ WPFA++RRAEI AHFAE+QR P +WNGRVLLGRD VF Sbjct: 1 MTSPVIHRVTTLDLAVRPIIWPFAEERRAEIAAHFAEKQRERPKIWNGRVLLGRDAVFTD 60 Query: 61 ERLSASYFETDFASFLAWRDWGFPDREVFNGFGMGALLASDGAFVCGVMGEQTANAGRIY 120 L+A+YFETDFASFLAWRDWGFPD VFNGFGMGAL ASDGAFV G M + TANAGRIY Sbjct: 61 GHLAATYFETDFASFLAWRDWGFPDTAVFNGFGMGALRASDGAFVMGEMAQHTANAGRIY 120 Query: 121 FPSGTPDLDDIRGETVDIAGSVMRELEEETGLLPSDCRGDADWHCIYTGVALAMMQILRV 180 FPSGTPDLDD+R +DI GSV+REL EETGL +D + DWHC+ +G A+AM+QI+ + Sbjct: 121 FPSGTPDLDDVRDGVLDIPGSVVRELAEETGLTAADYAAETDWHCVVSGHAIAMIQIINL 180 Query: 181 DMPGDALRARIEANLAQQEDPELAGIHLVRSRADLTPAMPRFVTAFIETQL 231 DMPG+A+RARIEANLA++ +PEL+ IHLVR DLTP MPRFVTAF+ Q Sbjct: 181 DMPGEAIRARIEANLARETEPELSAIHLVRGMDDLTPTMPRFVTAFVAQQF 231 >ref|YP_001207437.1| hypothetical protein BRADO5546 [Bradyrhizobium sp. ORS 278] emb|CAL79220.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 238 Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 147/233 (63%), Positives = 178/233 (76%) Query: 1 MQSPLICRVTALDLALQRRPWPFADQRRAEIDAHFAEQQRLNPNLWNGRVLLGRDPVFAG 60 M +I RVT LDL ++ WPFA +RR +I AHFAE+QR P LWNGR+LLGRD F Sbjct: 1 MTEVVIHRVTTLDLKVEPWDWPFAQERRDDIAAHFAERQREKPGLWNGRILLGRDARFES 60 Query: 61 ERLSASYFETDFASFLAWRDWGFPDREVFNGFGMGALLASDGAFVCGVMGEQTANAGRIY 120 + SA YFETDFAS LAWRDWGFPDR FNGFGMGAL ++DGAFV G MG TANAGR+Y Sbjct: 61 GQFSARYFETDFASLLAWRDWGFPDRTAFNGFGMGALRSADGAFVLGEMGAHTANAGRLY 120 Query: 121 FPSGTPDLDDIRGETVDIAGSVMRELEEETGLLPSDCRGDADWHCIYTGVALAMMQILRV 180 FP+GTPDLDD+ G T+D+A +V RE+EEETGL P+D R A W C+ TG ++A+M++L Sbjct: 121 FPAGTPDLDDVDGNTLDLAANVAREVEEETGLTPADYRASAHWDCVVTGASIALMRVLDA 180 Query: 181 DMPGDALRARIEANLAQQEDPELAGIHLVRSRADLTPAMPRFVTAFIETQLPA 233 G+ L+ RIEA+LA Q++PELAG+ LVR RADLT AMPRFVTAF+ETQ A Sbjct: 181 AQTGEVLQRRIEAHLAAQDEPELAGVRLVRCRADLTAAMPRFVTAFLETQFSA 233 >ref|YP_001241898.1| hypothetical protein BBta_6065 [Bradyrhizobium sp. BTAi1] gb|ABQ37992.1| hypothetical protein BBta_6065 [Bradyrhizobium sp. BTAi1] Length = 238 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 147/231 (63%), Positives = 175/231 (75%) Query: 1 MQSPLICRVTALDLALQRRPWPFADQRRAEIDAHFAEQQRLNPNLWNGRVLLGRDPVFAG 60 M +I RVTALDL ++ WPFA +RR +I AHFAE+QR P LWNGR+LLGRD F G Sbjct: 1 MTGAVIHRVTALDLKVEPWDWPFARERRDDIAAHFAERQREKPGLWNGRILLGRDARFDG 60 Query: 61 ERLSASYFETDFASFLAWRDWGFPDREVFNGFGMGALLASDGAFVCGVMGEQTANAGRIY 120 SASYFE DFAS LAWRDWGFPDR FNGFGMGAL ASDGAFV G MG TANAGR+Y Sbjct: 61 GTFSASYFEADFASLLAWRDWGFPDRTAFNGFGMGALRASDGAFVLGEMGAHTANAGRLY 120 Query: 121 FPSGTPDLDDIRGETVDIAGSVMRELEEETGLLPSDCRGDADWHCIYTGVALAMMQILRV 180 FP+GTPDLDD+R T+D+A +V RE+EEETGL P+D + W C+ TG ++A+M++L Sbjct: 121 FPAGTPDLDDVRDGTLDLAANVAREVEEETGLAPADYQASPHWDCVVTGASIALMRVLDA 180 Query: 181 DMPGDALRARIEANLAQQEDPELAGIHLVRSRADLTPAMPRFVTAFIETQL 231 G+ L+ RIEANLA Q++PEL+ I LVRSRADLT AMP FVTAF+ TQ Sbjct: 181 AETGEILKRRIEANLAAQDEPELSAIRLVRSRADLTAAMPHFVTAFLNTQF 231 >ref|YP_577956.1| hypothetical protein Nham_2717 [Nitrobacter hamburgensis X14] gb|ABE63496.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 233 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 142/223 (63%), Positives = 168/223 (75%) Query: 6 ICRVTALDLALQRRPWPFADQRRAEIDAHFAEQQRLNPNLWNGRVLLGRDPVFAGERLSA 65 I RV+ LDL ++ W FAD+RR+EI AHFA + P LWNGR+LLGR+PVF + A Sbjct: 4 IHRVSRLDLTVRPWRWAFADERRSEIGAHFAALRVKTPALWNGRILLGRNPVFERDCFRA 63 Query: 66 SYFETDFASFLAWRDWGFPDREVFNGFGMGALLASDGAFVCGVMGEQTANAGRIYFPSGT 125 YFETDFASFLAWRDWGFPD+ VFNGFGMGAL +DGAFV G MG TANAGRIYFPSGT Sbjct: 64 DYFETDFASFLAWRDWGFPDKSVFNGFGMGALRGNDGAFVLGEMGANTANAGRIYFPSGT 123 Query: 126 PDLDDIRGETVDIAGSVMRELEEETGLLPSDCRGDADWHCIYTGVALAMMQILRVDMPGD 185 PDL D+R +DIAGS++RE++EETGL PS R D +C+ G +A++Q+L VDMPG+ Sbjct: 124 PDLSDVRDGALDIAGSILREVKEETGLDPSAYRADPFRYCVVAGPLIAVIQLLDVDMPGE 183 Query: 186 ALRARIEANLAQQEDPELAGIHLVRSRADLTPAMPRFVTAFIE 228 ALRARI LA Q PEL+ IHLVR D TPAMP FVTAFI+ Sbjct: 184 ALRARIVRALAGQRSPELSTIHLVRGPEDFTPAMPVFVTAFID 226 >ref|YP_533100.1| hypothetical protein RPC_3239 [Rhodopseudomonas palustris BisB18] gb|ABD88781.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 234 Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 139/231 (60%), Positives = 169/231 (73%) Query: 1 MQSPLICRVTALDLALQRRPWPFADQRRAEIDAHFAEQQRLNPNLWNGRVLLGRDPVFAG 60 M +P+ RV L+L WPFAD RRAEIDAHFA+++ P+L+NGRVLLGR+ F Sbjct: 1 MTAPVFHRVAQLELIRDDWRWPFADDRRAEIDAHFAKRRLEKPDLFNGRVLLGRNARFTP 60 Query: 61 ERLSASYFETDFASFLAWRDWGFPDREVFNGFGMGALLASDGAFVCGVMGEQTANAGRIY 120 + SA FETDFASFL+WRDWG+PD VFNGFGMGAL ASDGAFV G MG+ TANAGR+Y Sbjct: 61 QCFSADIFETDFASFLSWRDWGYPDHNVFNGFGMGALRASDGAFVLGEMGQHTANAGRVY 120 Query: 121 FPSGTPDLDDIRGETVDIAGSVMRELEEETGLLPSDCRGDADWHCIYTGVALAMMQILRV 180 FP GTPD D+RG+ +DIAGS+ RE+ EETGLL SD R W C+ +G +A++++L+V Sbjct: 121 FPGGTPDPSDLRGDRLDIAGSISREIAEETGLLESDYRSSDGWCCVVSGTLIAILRVLQV 180 Query: 181 DMPGDALRARIEANLAQQEDPELAGIHLVRSRADLTPAMPRFVTAFIETQL 231 D P LR +IEA+LAQQ PEL IHLVR D T AMP FVTAF+ TQ Sbjct: 181 DRPSAVLRDKIEASLAQQVAPELCAIHLVREPGDFTAAMPSFVTAFLATQF 231