BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0187.0024.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773121.1| ABC transporter substrate-binding protein [Brad... 470 e-131 ref|YP_001241899.1| ABC transporter substrate-binding protein [B... 470 e-130 ref|YP_001207438.1| ABC transporter substrate-binding protein [B... 465 e-129 ref|YP_486940.1| extracellular solute-binding protein [Rhodopseu... 431 e-119 ref|YP_004109771.1| family 3 extracellular solute-binding protei... 430 e-119 >ref|NP_773121.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51746.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 351 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/260 (86%), Positives = 245/260 (94%) Query: 1 VSGYFDHCVNLAAKKQELQAFVVYDRYPGLVLVVSPKHTGEINSIKDLAGKKVGVSAPGS 60 VSGYFDHCVNLAAKKQELQAFVVYDRYPGLVLVVSP HT EI SIKDLAGKKVGVSAPGS Sbjct: 92 VSGYFDHCVNLAAKKQELQAFVVYDRYPGLVLVVSPAHTNEIKSIKDLAGKKVGVSAPGS 151 Query: 61 STDFFLKYLLKKNGLDPAGTAVIGVGLGATAVAAMEQGQIDAAVMLDPAVTVLQGSYKDL 120 STDFFLKY+LK+NGLDPAGTAVIGVGLGATAVAAMEQGQIDAAVMLDP+VTVLQGS+KDL Sbjct: 152 STDFFLKYMLKRNGLDPAGTAVIGVGLGATAVAAMEQGQIDAAVMLDPSVTVLQGSHKDL 211 Query: 121 KILSDTRTQHDTLAVFGGEYPGGALYSTAAWVNGHEKEVQALTNAIMATLAWIHSHSAED 180 +ILSDTRTQ DTL FGGEYPGGALYSTAAWVNGHEKE QALTNAI+ATL WIHSHS E+ Sbjct: 212 RILSDTRTQKDTLETFGGEYPGGALYSTAAWVNGHEKETQALTNAILATLVWIHSHSPEE 271 Query: 181 IMAKMPDEIVGKDRAQYLAALKNTIPMYSETGKMDPKGAEAVLAVFSEGSPDVAKAGIDV 240 IMAKMP+E VGK++ YLAALKNTIPM+SETGKMDPKGA+AVLAVFS GSP+VA A IDV Sbjct: 272 IMAKMPEETVGKNKDLYLAALKNTIPMFSETGKMDPKGADAVLAVFSVGSPEVANAKIDV 331 Query: 241 TKTYTNKFVDQAKKTTGNAK 260 +KT+TN++V+QAKKTTG+AK Sbjct: 332 SKTFTNRYVEQAKKTTGSAK 351 >ref|YP_001241899.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ37993.1| Putative ABC transporter (substrate-binding protein) [Bradyrhizobium sp. BTAi1] Length = 342 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 225/258 (87%), Positives = 242/258 (93%) Query: 1 VSGYFDHCVNLAAKKQELQAFVVYDRYPGLVLVVSPKHTGEINSIKDLAGKKVGVSAPGS 60 VSGYFDHCVNLAAKKQE+Q+FVVYDRYPGLVLVVSP H EINSIKDLAGKKVGVSAPGS Sbjct: 82 VSGYFDHCVNLAAKKQEMQSFVVYDRYPGLVLVVSPSHNKEINSIKDLAGKKVGVSAPGS 141 Query: 61 STDFFLKYLLKKNGLDPAGTAVIGVGLGATAVAAMEQGQIDAAVMLDPAVTVLQGSYKDL 120 STDFFLKYLLKKNGLDP GTAVIGVGLGATAVAAMEQGQIDAAVMLDP+VTVLQG++ DL Sbjct: 142 STDFFLKYLLKKNGLDPTGTAVIGVGLGATAVAAMEQGQIDAAVMLDPSVTVLQGTHPDL 201 Query: 121 KILSDTRTQHDTLAVFGGEYPGGALYSTAAWVNGHEKEVQALTNAIMATLAWIHSHSAED 180 KILSDTRTQHDTL VFGGEYPGGALYST AW+ GHEKE QALTNAI+ATL WIH+HS E+ Sbjct: 202 KILSDTRTQHDTLEVFGGEYPGGALYSTVAWIAGHEKETQALTNAIVATLGWIHAHSPEE 261 Query: 181 IMAKMPDEIVGKDRAQYLAALKNTIPMYSETGKMDPKGAEAVLAVFSEGSPDVAKAGIDV 240 IMAKMP+E+VGKD+A YLAALKNTIPMYS+TGKMDPKGA+AVLAVFS GSPDVAKA IDV Sbjct: 262 IMAKMPEELVGKDKALYLAALKNTIPMYSQTGKMDPKGADAVLAVFSTGSPDVAKANIDV 321 Query: 241 TKTYTNKFVDQAKKTTGN 258 +KT+TNKFV+QAK TTG Sbjct: 322 SKTFTNKFVEQAKGTTGT 339 >ref|YP_001207438.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL79221.1| Putative ABC transporter (substrate-binding protein) [Bradyrhizobium sp. ORS 278] Length = 335 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 220/254 (86%), Positives = 242/254 (95%) Query: 1 VSGYFDHCVNLAAKKQELQAFVVYDRYPGLVLVVSPKHTGEINSIKDLAGKKVGVSAPGS 60 VSGYFDHCVNLAAKKQE+Q+FVVYDRYPGLVLVV+P H EINSIKDLAGKKVGVSAPGS Sbjct: 82 VSGYFDHCVNLAAKKQEMQSFVVYDRYPGLVLVVAPSHNKEINSIKDLAGKKVGVSAPGS 141 Query: 61 STDFFLKYLLKKNGLDPAGTAVIGVGLGATAVAAMEQGQIDAAVMLDPAVTVLQGSYKDL 120 STDFFLKY+LKKNGLDPAGT+VIGVGLGATAVAAMEQGQIDAAVMLDP+VTVLQG++ DL Sbjct: 142 STDFFLKYMLKKNGLDPAGTSVIGVGLGATAVAAMEQGQIDAAVMLDPSVTVLQGTHPDL 201 Query: 121 KILSDTRTQHDTLAVFGGEYPGGALYSTAAWVNGHEKEVQALTNAIMATLAWIHSHSAED 180 KILSDTRTQHDTL VFGGEYPGGALYST AW+ GHEKE QALTNAI+AT+AWIH+H+ E+ Sbjct: 202 KILSDTRTQHDTLEVFGGEYPGGALYSTVAWIAGHEKETQALTNAILATIAWIHAHTPEE 261 Query: 181 IMAKMPDEIVGKDRAQYLAALKNTIPMYSETGKMDPKGAEAVLAVFSEGSPDVAKAGIDV 240 IMAKMP+E+VGKD+A YLAALKNTIPMYS+TGKMDPKGA+AVLAVFS GSPDVAKA IDV Sbjct: 262 IMAKMPEELVGKDKALYLAALKNTIPMYSQTGKMDPKGADAVLAVFSTGSPDVAKANIDV 321 Query: 241 TKTYTNKFVDQAKK 254 +KT+TNKFV+QAKK Sbjct: 322 SKTFTNKFVEQAKK 335 >ref|YP_486940.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gb|ABD08029.1| extracellular solute-binding protein, family 3 [Rhodopseudomonas palustris HaA2] Length = 341 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/260 (79%), Positives = 230/260 (88%) Query: 1 VSGYFDHCVNLAAKKQELQAFVVYDRYPGLVLVVSPKHTGEINSIKDLAGKKVGVSAPGS 60 VSGYFDH VNLAAKKQE+Q+FVVYDRYPGLVLVVSP HT +I S+KDLAGKKVGVSAPGS Sbjct: 82 VSGYFDHTVNLAAKKQEMQSFVVYDRYPGLVLVVSPGHTAKIASVKDLAGKKVGVSAPGS 141 Query: 61 STDFFLKYLLKKNGLDPAGTAVIGVGLGATAVAAMEQGQIDAAVMLDPAVTVLQGSYKDL 120 STDFFLKYLLKKNG+DP AVIGVGLGATAVAAM+QGQI+AAVMLDPAVT+LQ ++ DL Sbjct: 142 STDFFLKYLLKKNGVDPNDVAVIGVGLGATAVAAMQQGQIEAAVMLDPAVTILQAAHADL 201 Query: 121 KILSDTRTQHDTLAVFGGEYPGGALYSTAAWVNGHEKEVQALTNAIMATLAWIHSHSAED 180 +ILSDTRT+HDT VFGG+YPGGALYST AW+ H KE Q LTNAI+ TL+WIH+HSAE+ Sbjct: 202 RILSDTRTEHDTREVFGGDYPGGALYSTVAWIKAHPKEAQGLTNAILNTLSWIHAHSAEE 261 Query: 181 IMAKMPDEIVGKDRAQYLAALKNTIPMYSETGKMDPKGAEAVLAVFSEGSPDVAKAGIDV 240 I KMP IVGKD+AQY+AALKNTIPMYS TG MDPKGAEAVLAVFS SPDVAKA IDV Sbjct: 262 IADKMPPNIVGKDKAQYVAALKNTIPMYSTTGLMDPKGAEAVLAVFSTSSPDVAKANIDV 321 Query: 241 TKTYTNKFVDQAKKTTGNAK 260 T+TYTN FV+QA KT+G AK Sbjct: 322 TRTYTNAFVEQAAKTSGAAK 341 >ref|YP_004109771.1| family 3 extracellular solute-binding protein [Rhodopseudomonas palustris DX-1] gb|ADU45038.1| extracellular solute-binding protein family 3 [Rhodopseudomonas palustris DX-1] Length = 341 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/260 (80%), Positives = 229/260 (88%) Query: 1 VSGYFDHCVNLAAKKQELQAFVVYDRYPGLVLVVSPKHTGEINSIKDLAGKKVGVSAPGS 60 VSGYFDH VNLAAKKQE+Q+FVVYDRYPGLVL VSP HT EI SIKDLAGKKVGVSAPGS Sbjct: 82 VSGYFDHTVNLAAKKQEMQSFVVYDRYPGLVLAVSPAHTAEIKSIKDLAGKKVGVSAPGS 141 Query: 61 STDFFLKYLLKKNGLDPAGTAVIGVGLGATAVAAMEQGQIDAAVMLDPAVTVLQGSYKDL 120 STDFFLKYLLKK+G+DP AVIGVGLGATAVAAM+QGQIDAAVMLDPAVT+LQ ++ DL Sbjct: 142 STDFFLKYLLKKHGVDPNNVAVIGVGLGATAVAAMQQGQIDAAVMLDPAVTILQAAHADL 201 Query: 121 KILSDTRTQHDTLAVFGGEYPGGALYSTAAWVNGHEKEVQALTNAIMATLAWIHSHSAED 180 +ILSDTRT+HDT VFGG+YPGGALYST AW+ H KE Q+LTNAI+ATL WIHSHSAE+ Sbjct: 202 RILSDTRTEHDTREVFGGDYPGGALYSTVAWIKAHPKEAQSLTNAILATLQWIHSHSAEE 261 Query: 181 IMAKMPDEIVGKDRAQYLAALKNTIPMYSETGKMDPKGAEAVLAVFSEGSPDVAKAGIDV 240 I +MP IVGKD+AQY+AALKNTIPMYS TG MDPKGA+AVLAVFS GSPDVAKA IDV Sbjct: 262 IADRMPPNIVGKDKAQYVAALKNTIPMYSTTGLMDPKGADAVLAVFSTGSPDVAKANIDV 321 Query: 241 TKTYTNKFVDQAKKTTGNAK 260 TKTYTN FV+QA K G +K Sbjct: 322 TKTYTNAFVEQAAKGAGGSK 341