BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0187.0019.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03525104.1| putative transcriptional regulator protein [R... 439 e-121 ref|YP_001978886.1| transcriptional regulator protein [Rhizobium... 438 e-121 ref|YP_470126.1| transcriptional regulator protein [Rhizobium et... 431 e-119 ref|YP_002281788.1| XRE family transcriptional regulator [Rhizob... 427 e-118 ref|YP_001832609.1| XRE family transcriptional regulator [Beijer... 426 e-117 >ref|ZP_03525104.1| putative transcriptional regulator protein [Rhizobium etli GR56] Length = 289 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 210/273 (76%), Positives = 237/273 (86%) Query: 1 MSEPLAQENLLGAYLKDRRSKLDPAVFGFPPERRRTPGLRREEVAQRANISATWYTWLEQ 60 M E + EN LGAYLKDRR+KLDPA FGF ERRRTPGLRREEVA RANIS TWYTWLEQ Sbjct: 1 MDEFITSENRLGAYLKDRRAKLDPAAFGFAGERRRTPGLRREEVASRANISPTWYTWLEQ 60 Query: 61 GRGGAPSADVLDRIARALMLTDVEREHLFLLGLGRTPEVRYQKSEGVTPRLQRVLDALEP 120 GRGGAPSADVLDRI+RALMLTD+EREHLFL+GLGR PEVRY++ +GVTPRLQ VLDAL+P Sbjct: 61 GRGGAPSADVLDRISRALMLTDIEREHLFLIGLGRPPEVRYRRQDGVTPRLQGVLDALDP 120 Query: 121 RPAVLRTATWDIVAWNRASTVMLTDYGSLPPRERNVLRFMFLDPRVRAAQHDWASVARFV 180 PA++R A WD++AWNRA+TV+LTDYG+LPP ERNVLRF+FLDPRVRAAQ+DW VARFV Sbjct: 121 SPALIRNAIWDVIAWNRAATVLLTDYGALPPEERNVLRFIFLDPRVRAAQYDWEGVARFV 180 Query: 181 VGAFRVDAARAGAAAEVQPFVDELCRLSPEFAALWRDNDVRTHGEGVKQLRHPILGPVKF 240 V AFRVDAARAGAA +V+P VDELCR SPEF A+WRDNDVRTHGEG K ++HP+LG + F Sbjct: 181 VAAFRVDAARAGAAEQVKPLVDELCRRSPEFLAMWRDNDVRTHGEGAKHIKHPLLGLLSF 240 Query: 241 EYSAFAVDGRPDLSMIVYNPIDPEVTEKIRGLI 273 EYSAF VDGRPDLSM+VYNP E KI GL+ Sbjct: 241 EYSAFQVDGRPDLSMVVYNPATAEDAAKIEGLV 273 >ref|YP_001978886.1| transcriptional regulator protein [Rhizobium etli CIAT 652] gb|ACE91708.1| putative transcriptional regulator protein [Rhizobium etli CIAT 652] Length = 274 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 211/273 (77%), Positives = 238/273 (87%) Query: 1 MSEPLAQENLLGAYLKDRRSKLDPAVFGFPPERRRTPGLRREEVAQRANISATWYTWLEQ 60 MSE + EN LGAYLK RR+KLDPA GF ERRRTPGLRREEVA RANIS TWYTWLEQ Sbjct: 1 MSEFVTSENRLGAYLKGRRAKLDPAALGFAGERRRTPGLRREEVASRANISPTWYTWLEQ 60 Query: 61 GRGGAPSADVLDRIARALMLTDVEREHLFLLGLGRTPEVRYQKSEGVTPRLQRVLDALEP 120 GRGGAPSADVLDRI+RALMLTD+EREHLFL+GLGR PEVRY++ EGVTPRLQ VLDAL+P Sbjct: 61 GRGGAPSADVLDRISRALMLTDIEREHLFLIGLGRPPEVRYRRQEGVTPRLQGVLDALDP 120 Query: 121 RPAVLRTATWDIVAWNRASTVMLTDYGSLPPRERNVLRFMFLDPRVRAAQHDWASVARFV 180 PA++R A WD+VAWNRA+TV+LTDYG+LPP ERNVLRF+FLDPRVRAAQ+DW SVARFV Sbjct: 121 SPALIRNAIWDVVAWNRAATVLLTDYGALPPEERNVLRFIFLDPRVRAAQYDWESVARFV 180 Query: 181 VGAFRVDAARAGAAAEVQPFVDELCRLSPEFAALWRDNDVRTHGEGVKQLRHPILGPVKF 240 V AFRVDAARAGAA +V+P VDELCR SPEF A+WRDNDVR+HGEG K ++HP+LG + F Sbjct: 181 VAAFRVDAARAGAAEQVEPLVDELCRKSPEFLAMWRDNDVRSHGEGAKHIKHPLLGLLSF 240 Query: 241 EYSAFAVDGRPDLSMIVYNPIDPEVTEKIRGLI 273 EYSAF VDGRPDLSM+VYNP E EKIR ++ Sbjct: 241 EYSAFQVDGRPDLSMVVYNPATVEDAEKIRRVV 273 >ref|YP_470126.1| transcriptional regulator protein [Rhizobium etli CFN 42] gb|ABC91399.1| putative transcriptional regulator protein [Rhizobium etli CFN 42] Length = 274 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 216/273 (79%), Positives = 240/273 (87%) Query: 1 MSEPLAQENLLGAYLKDRRSKLDPAVFGFPPERRRTPGLRREEVAQRANISATWYTWLEQ 60 MSE + EN LGAYLKDRR KLDPA GF ERRRTPGLRREEVA RANIS TWYTWLEQ Sbjct: 1 MSEFVTSENRLGAYLKDRRGKLDPAALGFAGERRRTPGLRREEVASRANISPTWYTWLEQ 60 Query: 61 GRGGAPSADVLDRIARALMLTDVEREHLFLLGLGRTPEVRYQKSEGVTPRLQRVLDALEP 120 GRGGAPSADVLDRI+RALMLTD+EREHLFL+GLGR PEVRY+K EGVTPRLQ VLDAL+P Sbjct: 61 GRGGAPSADVLDRISRALMLTDIEREHLFLIGLGRLPEVRYRKEEGVTPRLQGVLDALDP 120 Query: 121 RPAVLRTATWDIVAWNRASTVMLTDYGSLPPRERNVLRFMFLDPRVRAAQHDWASVARFV 180 PA++RTA WD+VAWNRA+TV+LTDYG+LPP+ERNVLRF+FLDPRVRAAQ+DW SVARFV Sbjct: 121 CPALIRTAIWDVVAWNRAATVLLTDYGALPPKERNVLRFIFLDPRVRAAQYDWESVARFV 180 Query: 181 VGAFRVDAARAGAAAEVQPFVDELCRLSPEFAALWRDNDVRTHGEGVKQLRHPILGPVKF 240 V AFRVDAARAGAAAEV+P +DELCR SPEF A+WRDNDVRTHGEG K ++HP+LG + F Sbjct: 181 VAAFRVDAARAGAAAEVEPLLDELCRKSPEFLAMWRDNDVRTHGEGAKHIKHPVLGLLSF 240 Query: 241 EYSAFAVDGRPDLSMIVYNPIDPEVTEKIRGLI 273 EYSAF VDGRPDLSM+VYNP E KIR L+ Sbjct: 241 EYSAFLVDGRPDLSMVVYNPATAEDAGKIRSLL 273 >ref|YP_002281788.1| XRE family transcriptional regulator [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI55562.1| transcriptional regulator, XRE family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 278 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/273 (78%), Positives = 238/273 (87%) Query: 1 MSEPLAQENLLGAYLKDRRSKLDPAVFGFPPERRRTPGLRREEVAQRANISATWYTWLEQ 60 MSE + EN LGAYLKDRR+KLDPA GF ERRRTPGLRREEVA RANIS TWYTWLEQ Sbjct: 5 MSEFVTSENRLGAYLKDRRAKLDPAALGFAGERRRTPGLRREEVAGRANISPTWYTWLEQ 64 Query: 61 GRGGAPSADVLDRIARALMLTDVEREHLFLLGLGRTPEVRYQKSEGVTPRLQRVLDALEP 120 GRGGAPSADVLDRI+RALMLTD+EREHLFL+GLGR PEVRY + +GVTPRLQ VLDAL+P Sbjct: 65 GRGGAPSADVLDRISRALMLTDIEREHLFLIGLGRPPEVRYCRQDGVTPRLQGVLDALDP 124 Query: 121 RPAVLRTATWDIVAWNRASTVMLTDYGSLPPRERNVLRFMFLDPRVRAAQHDWASVARFV 180 PA++R A WD++AWNRA+TV+LTDYG+LPP ERNVLRF+FLDPRVRAAQHDW SVARFV Sbjct: 125 SPALIRNAIWDVIAWNRAATVLLTDYGALPPAERNVLRFIFLDPRVRAAQHDWESVARFV 184 Query: 181 VGAFRVDAARAGAAAEVQPFVDELCRLSPEFAALWRDNDVRTHGEGVKQLRHPILGPVKF 240 V AFRVDAARAGAAAEV+P VDELCR SPEF A+WRDNDVRTHGEG K +RH +LG + F Sbjct: 185 VAAFRVDAARAGAAAEVEPLVDELCRKSPEFLAMWRDNDVRTHGEGAKHIRHRVLGLLSF 244 Query: 241 EYSAFAVDGRPDLSMIVYNPIDPEVTEKIRGLI 273 EYSAF VDGRPDLSM+VYNP E EKIR L+ Sbjct: 245 EYSAFQVDGRPDLSMVVYNPATVEDAEKIRELV 277 >ref|YP_001832609.1| XRE family transcriptional regulator [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB95120.1| transcriptional regulator, XRE family [Beijerinckia indica subsp. indica ATCC 9039] Length = 276 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 214/268 (79%), Positives = 237/268 (88%), Gaps = 1/268 (0%) Query: 8 ENLLGAYLKDRRSKLDPAVFGFPPERRRTPGLRREEVAQRANISATWYTWLEQGRGGAPS 67 EN LG YLKDRR KLDPA FGFP ERRRTPGLRREEVAQRANISATWYTWLEQGRGGAPS Sbjct: 7 ENALGTYLKDRRMKLDPAAFGFPSERRRTPGLRREEVAQRANISATWYTWLEQGRGGAPS 66 Query: 68 ADVLDRIARALMLTDVEREHLFLLGLGRTPEVRYQKSEGVTPRLQRVLDALEPRPAVLRT 127 ADVLDRIARALMLTDVEREHLFLLGLGR PE RYQK+ GVTPRLQRVLDAL+PRPA++RT Sbjct: 67 ADVLDRIARALMLTDVEREHLFLLGLGRPPEARYQKTGGVTPRLQRVLDALDPRPALIRT 126 Query: 128 ATWDIVAWNRASTVMLTDYGSLPPRERNVLRFMFLDPRVRAAQHDWASVARFVVGAFRVD 187 ATWD++AWNRA+TVML DYGSLPP ERN+LRF+FLDP RAAQ+DW SVARF +G FRVD Sbjct: 127 ATWDVLAWNRAATVMLMDYGSLPPEERNILRFIFLDPHARAAQYDWESVARFALGTFRVD 186 Query: 188 AARAGAAAEVQPFVDELCRLSPEFAALWRDNDVR-THGEGVKQLRHPILGPVKFEYSAFA 246 AARAGAAAEV+P VDELCRLSPEF A+W +NDVR + E VK +RHPILGP+ FEYSAFA Sbjct: 187 AARAGAAAEVEPLVDELCRLSPEFKAMWAENDVRGSQHEAVKHIRHPILGPLAFEYSAFA 246 Query: 247 VDGRPDLSMIVYNPIDPEVTEKIRGLIE 274 VDGR DL+M+VYNP E E+I+ L++ Sbjct: 247 VDGRTDLAMVVYNPATEEDAERIKSLMK 274