BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0187.0012.p (268 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_887279.1| short chain dehydrogenase [Bordetella bronchise... 333 2e-89 gb|EGC09279.1| short chain dehydrogenase [Escherichia fergusonii... 293 2e-77 ref|YP_001737036.1| short-chain dehydrogenase/reductase SDR [Can... 139 5e-31 ref|YP_004460643.1| 3-oxoacyl-(acyl-carrier-protein) reductase [... 137 2e-30 ref|YP_004024214.1| 3-oxoacyl-(acyl-carrier-protein) reductase [... 135 5e-30 >ref|NP_887279.1| short chain dehydrogenase [Bordetella bronchiseptica RB50] emb|CAE31229.1| putative short chain dehydrogenase [Bordetella bronchiseptica RB50] Length = 279 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 175/263 (66%), Positives = 210/263 (79%), Gaps = 4/263 (1%) Query: 8 VLVSGGTFGIGRAITLGLARRGHAVVAFGLEAAQVSSTAQNAIPALREQLDREGLSAEL- 66 +V+GGTFG+G+AITL LARRGH V+AFGLE+AQ SSTA LR L GL + Sbjct: 10 TIVTGGTFGLGQAITLSLARRGHRVLAFGLESAQASSTAAG-FDGLRAALAEAGLQERVA 68 Query: 67 -MEADVSQANDVARVVAHAMARFGRIDGVVNNAAIGPLGTVLDTDEALFDRIIAVNLKGP 125 M ADV+ D RVV A+ R+GR+DG+VNNAAIGPLGTVL T+ A+ DRI+AVN+KG Sbjct: 69 VMAADVADEADTGRVVDEALRRYGRVDGLVNNAAIGPLGTVLSTEPAMADRILAVNVKGV 128 Query: 126 YLTSRAAIPYMIAQGGGSIVNIGSGAGWGKPNMAVYSASKGGVVALSAAMAYDFFHQRIR 185 YL SRA IP+M AQGGG+IVNIGSGAG+GKP+MA+Y+ASKG V+ALS+AMAYD FH RIR Sbjct: 129 YLMSRAVIPHMRAQGGGAIVNIGSGAGYGKPDMAIYAASKGAVLALSSAMAYDHFHDRIR 188 Query: 186 VNTVIPGGGGIVSGMSLGRVGGDAARF-GKGAPGTAAGRVAAGDDIANVVAFLLSPEAET 244 VN IPGGGGIVSGMS+GRVGGD A F + A G+AAGR A+G+D+AN VAFLLS EAE Sbjct: 189 VNVAIPGGGGIVSGMSVGRVGGDEALFRRRQAAGSAAGRPASGEDLANAVAFLLSGEAEA 248 Query: 245 LSGTVIDVGCFAQQGGPIPPQPA 267 +SGTV+DVGCFA QGGP+P +P+ Sbjct: 249 ISGTVVDVGCFANQGGPVPARPS 271 >gb|EGC09279.1| short chain dehydrogenase [Escherichia fergusonii B253] gb|EGC96518.1| hypothetical protein ECD227_2756 [Escherichia fergusonii ECD227] Length = 264 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 151/263 (57%), Positives = 196/263 (74%), Gaps = 8/263 (3%) Query: 6 KTVLVSGGTFGIGRAITLGLARRGHAVVAFGLEAAQVSSTAQNAIPALREQLDREGLSAE 65 KTVL+SGGTFG+GR I LGLAR G+ VVAFGL++ Q +S AQN+I A+R + ++E L + Sbjct: 2 KTVLISGGTFGLGREIALGLARSGYNVVAFGLDSKQPASLAQNSIQAMRSEAEQEHLPLQ 61 Query: 66 LMEADVSQANDVARVVAHAMARFGRIDGVVNNAAIGPLGTVLDTDEALFDRIIAVNLKGP 125 ++EADV++ D+A VV A++ +GRID VVNNAAIGPLG DT+ +L+DR++AVNLKGP Sbjct: 62 VLEADVTREQDIAAVVNCALSHYGRIDAVVNNAAIGPLGKATDTEPSLWDRVLAVNLKGP 121 Query: 126 YLTSRAAIPYMIAQGGGSIVNIGSGAGWGKPNMAVYSASKGGVVALSAAMAYDFFHQRIR 185 YL +RA +PY+ Q GGSI+N+GSGAGWGK NM Y+ASKGG++A +AAMA D+F RIR Sbjct: 122 YLLARAVVPYLQQQNGGSIINVGSGAGWGKANMLAYAASKGGLIAFNAAMALDYFADRIR 181 Query: 186 VNTVIPGGGGIVSGMSLGRVGGDAARFGKGAP----GTAAGRVAAGDDIANVVAFLLSPE 241 VN VIPGGGGI GMSLGR +G+G G+ AGR G+D+ + FLLS E Sbjct: 182 VNMVIPGGGGIAGGMSLGR----NQEYGQGVAQPYIGSVAGRAVNGEDMMATIRFLLSDE 237 Query: 242 AETLSGTVIDVGCFAQQGGPIPP 264 A+ +SGT+ID+GCF QG PP Sbjct: 238 AQAISGTIIDIGCFFHQGSSTPP 260 >ref|YP_001737036.1| short-chain dehydrogenase/reductase SDR [Candidatus Korarchaeum cryptofilum OPF8] gb|ACB07353.1| short-chain dehydrogenase/reductase SDR [Candidatus Korarchaeum cryptofilum OPF8] Length = 254 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/247 (36%), Positives = 131/247 (53%), Gaps = 14/247 (5%) Query: 6 KTVLVSGGTFGIGRAITLGLARRGHAVVAFGLEAAQVSSTAQNAIPALREQLDREGLSAE 65 K L++GG+ GIGRAI L L++ G + ++ + +L ++ R+ A Sbjct: 12 KVALITGGSSGIGRAIALKLSQAGAKIAILDIKECE----------SLLNEIGRD--KAR 59 Query: 66 LMEADVSQANDVARVVAHAMARFGRIDGVVNNAAIGPLGTVLDTDEALFDRIIAVNLKGP 125 DV+ A++V VV FGRID VVN A + ++T E +D+++ VNLKGP Sbjct: 60 FYRCDVTSADEVREVVRSVYEEFGRIDIVVNAAGVIVRKDAVETSEEEWDKVLNVNLKGP 119 Query: 126 YLTSRAAIPYMIAQGGGSIVNIGSGAGW-GKPNMAVYSASKGGVVALSAAMAYDFFHQRI 184 +L S+ +IPYMI GGGSIVN+ SG G G P Y ASKGG++ ++ AMA D I Sbjct: 120 FLVSKYSIPYMIRGGGGSIVNVASGWGLKGGPKAVAYCASKGGLINMTRAMAIDHGKDGI 179 Query: 185 RVNTVIPGGGGIVSGMSLG-RVGGDAARFGKGAPGTAAGRVAAGDDIANVVAFLLSPEAE 243 RVN V PG S ++G F + A R+ +DIAN V FL+S A Sbjct: 180 RVNCVAPGDVDTPMLRSEAEQLGMKWEDFLREAANRPLARIGKPEDIANAVLFLVSDMAS 239 Query: 244 TLSGTVI 250 ++G + Sbjct: 240 WITGATL 246 >ref|YP_004460643.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Tepidanaerobacter sp. Re1] gb|AEE91336.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Tepidanaerobacter sp. Re1] Length = 246 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/247 (36%), Positives = 136/247 (55%), Gaps = 16/247 (6%) Query: 6 KTVLVSGGTFGIGRAITLGLARRG-HAVVAFGLEAAQVSSTAQNAIPALREQLDREGLSA 64 K LV+GG+ GIGR+I L LAR G H +V + S+ + A + +++ G A Sbjct: 6 KVCLVTGGSRGIGRSICLELARNGAHVIVNY--------SSDEKAATQVVNEIELLGKKA 57 Query: 65 ELMEADVSQANDVARVVAHAMARFGRIDGVVNNAAIGPLGTVLDTDEALFDRIIAVNLKG 124 ++ +ADVS + V +V + FG+ID +VNNA + +L E +D+++AVNLKG Sbjct: 58 KMYKADVSSFDQVVNMVDNVYNEFGKIDILVNNAGVAKDALILRMTEKDWDKVVAVNLKG 117 Query: 125 PYLTSRAAIPYMIAQGGGSIVNIGSGAG-WGKPNMAVYSASKGGVVALSAAMAYDFFHQR 183 + S+A YM+ Q G I+NI S G +G Y+A+K G++ + ++A + + Sbjct: 118 VFNASKACAKYMVKQKEGKIINISSIVGIYGNAGQVNYAAAKAGIIGFTKSLAKELGSRG 177 Query: 184 IRVNTVIPGGGGIVSGMSLGRVGGDAARFGKGAPGTAAGRVAAGDDIANVVAFLLSPEAE 243 I VN V P G I + M+ + D A K P RV DD+ANVVAFL S +A+ Sbjct: 178 ITVNAVAP--GFIKTDMTFSLLEKD-ADISKNIP---LKRVGMPDDVANVVAFLASKKAD 231 Query: 244 TLSGTVI 250 ++G VI Sbjct: 232 YITGQVI 238 >ref|YP_004024214.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Caldicellulosiruptor kronotskyensis 2002] gb|ADQ46395.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Caldicellulosiruptor kronotskyensis 2002] Length = 248 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 89/248 (35%), Positives = 137/248 (55%), Gaps = 13/248 (5%) Query: 6 KTVLVSGGTFGIGRAITLGLARRGHAVVAFGLEAAQVSSTAQNAIPALREQLDREGLSAE 65 K L++G + GIGRAI L A+ G VV + + S A+N L+E++++ G Sbjct: 7 KVALITGASRGIGRAIALKFAQNGANVV---INYSSSQSQAEN----LKEEIEKIGTKTM 59 Query: 66 LMEADVSQANDVARVVAHAMARFGRIDGVVNNAAIGPLGTVLDTDEALFDRIIAVNLKGP 125 +++ DVS ++V+ + + FGR+D +VNNA I G +L +E FD++IA+NLKG Sbjct: 60 IIKCDVSNPDEVSHMFSQVEKEFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGA 119 Query: 126 YLTSRAAIPYMIAQGGGSIVNIGSGAGW-GKPNMAVYSASKGGVVALSAAMAYDFFHQRI 184 +L +RAA M+ Q G+I+NI S G G A Y+ASK G++ L+ ++A + + I Sbjct: 120 FLCARAAAKMMVKQRFGNIINISSVVGIAGNVGQANYAASKAGIIGLTKSLAKELASRNI 179 Query: 185 RVNTVIPGGGGIVSGMSLGRVGGDAARFGKGAPGTAAGRVAAGDDIANVVAFLLSPEAET 244 RVN + P G I + M+ V D + GR D+IANV FL S + Sbjct: 180 RVNAIAP--GFIKTDMT--EVLSDKVKEAM-LSSIPLGRFGEADEIANVALFLASSLSSY 234 Query: 245 LSGTVIDV 252 ++G VI V Sbjct: 235 ITGQVIVV 242