BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0187.0011.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EGC96517.1| hypothetical protein ECD227_2755 [Escherichia fer... 219 1e-55 gb|EGC09280.1| ring hydroxylating beta subunit [Escherichia ferg... 219 1e-55 ref|NP_887280.1| 3-phenylpropionate dioxygenase subunit beta [Bo... 209 3e-52 ref|YP_638840.1| 3-phenylpropionate dioxygenase subunit beta [My... 183 1e-44 ref|YP_935644.1| 3-phenylpropionate dioxygenase subunit beta [My... 182 3e-44 >gb|EGC96517.1| hypothetical protein ECD227_2755 [Escherichia fergusonii ECD227] Length = 178 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 103/170 (60%), Positives = 129/170 (75%) Query: 28 LKADIEDFYYREADLLDDRRFRDWLELLTDDISYFMPIRRNVKFGQQAARENTKRGEGIS 87 + A+I DF+Y EA LLD+R F+ WL+LL DDI YFMP+RRNVKFGQ AA+ENT G IS Sbjct: 9 ITAEIADFFYAEASLLDERNFQAWLDLLHDDIVYFMPMRRNVKFGQHAAKENTVLGNDIS 68 Query: 88 WFDEDKWTLTKRVEQILTGVHYAEEPLSRITHMVSNVQIKGARPDVGAVRELDVTSRFLV 147 WFDE KWTLTKRVEQILTGVHYAEEPLSR TH++SNV++ R D + + F++ Sbjct: 69 WFDEGKWTLTKRVEQILTGVHYAEEPLSRTTHLISNVRVLDVRKDEDNQLLISTSCHFIM 128 Query: 148 YQNRVEYETYIFVGRRNDTLRLTDTAWKIARREILLEQNILLAKNLTTFF 197 Y NRVEYE + G+R DTL T ++++ +REI+L+QN+LL KNLTTFF Sbjct: 129 YLNRVEYEVNLLAGKRYDTLIATGDSYQVLKREIILDQNVLLVKNLTTFF 178 >gb|EGC09280.1| ring hydroxylating beta subunit [Escherichia fergusonii B253] Length = 178 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 103/170 (60%), Positives = 129/170 (75%) Query: 28 LKADIEDFYYREADLLDDRRFRDWLELLTDDISYFMPIRRNVKFGQQAARENTKRGEGIS 87 + A+I DF+Y EA LLD+R F+ WL+LL DDI YFMP+RRNVKFGQ AA+ENT G IS Sbjct: 9 ITAEIADFFYAEASLLDERNFQAWLDLLHDDIVYFMPMRRNVKFGQHAAKENTVLGNDIS 68 Query: 88 WFDEDKWTLTKRVEQILTGVHYAEEPLSRITHMVSNVQIKGARPDVGAVRELDVTSRFLV 147 WFDE KWTLTKRVEQILTGVHYAEEPLSR TH++SNV++ R D + + F++ Sbjct: 69 WFDEGKWTLTKRVEQILTGVHYAEEPLSRTTHLISNVRVLDVRKDEDNQLLISTSCHFIM 128 Query: 148 YQNRVEYETYIFVGRRNDTLRLTDTAWKIARREILLEQNILLAKNLTTFF 197 Y NRVEYE + G+R DTL T ++++ +REI+L+QN+LL KNLTTFF Sbjct: 129 YLNRVEYEVNLLAGKRYDTLIATGDSYQVLKREIILDQNVLLVKNLTTFF 178 >ref|NP_887280.1| 3-phenylpropionate dioxygenase subunit beta [Bordetella bronchiseptica RB50] emb|CAE31230.1| hydroxylating beta subunit of a dioxygenase system [Bordetella bronchiseptica RB50] Length = 194 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 104/197 (52%), Positives = 131/197 (66%), Gaps = 3/197 (1%) Query: 1 MTTTVQDQDKQQHAGIAAIERSAAYYRLKADIEDFYYREADLLDDRRFRDWLELLTDDIS 60 MT T+ D IA + R A YY LK +IE+ Y E +LLD R+F WL+ L +D+ Sbjct: 1 MTETLACADS---PAIAPLARDARYYELKREIEEHMYDECELLDTRQFSRWLDTLAEDLV 57 Query: 61 YFMPIRRNVKFGQQAARENTKRGEGISWFDEDKWTLTKRVEQILTGVHYAEEPLSRITHM 120 YFMP+ NVKFG+ A E+T+ + +SWF+E KWTLTKR EQI+TGVH+AEEPLSR+ + Sbjct: 58 YFMPMNFNVKFGRHAQDEHTRVEKDMSWFNEGKWTLTKRAEQIMTGVHWAEEPLSRLCRV 117 Query: 121 VSNVQIKGARPDVGAVRELDVTSRFLVYQNRVEYETYIFVGRRNDTLRLTDTAWKIARRE 180 VSNVQ+ E+D SRF++YQNR EYE Y F GRR D LR W++ RRE Sbjct: 118 VSNVQLTAIAEGADGALEVDARSRFVMYQNRCEYEEYYFTGRRYDRLRRVGDGWQLVRRE 177 Query: 181 ILLEQNILLAKNLTTFF 197 I L QN+LLAKNLT FF Sbjct: 178 IHLPQNVLLAKNLTMFF 194 >ref|YP_638840.1| 3-phenylpropionate dioxygenase subunit beta [Mycobacterium sp. MCS] ref|YP_937692.1| 3-phenylpropionate dioxygenase subunit beta [Mycobacterium sp. KMS] ref|YP_951384.1| 3-phenylpropionate dioxygenase subunit beta [Mycobacterium vanbaalenii PYR-1] ref|YP_001069932.1| 3-phenylpropionate dioxygenase subunit beta [Mycobacterium sp. JLS] ref|YP_001131829.1| 3-phenylpropionate dioxygenase subunit beta [Mycobacterium gilvum PYR-GCK] ref|YP_001131908.1| 3-phenylpropionate dioxygenase subunit beta [Mycobacterium gilvum PYR-GCK] gb|ABG07784.1| aromatic-ring-hydroxylating dioxygenase, beta subunit [Mycobacterium sp. MCS] gb|ABL90902.1| aromatic-ring-hydroxylating dioxygenase, beta subunit [Mycobacterium sp. KMS] gb|ABM11378.1| aromatic-ring-hydroxylating dioxygenase, beta subunit [Mycobacterium vanbaalenii PYR-1] gb|ABN97441.1| aromatic-ring-hydroxylating dioxygenase, beta subunit [Mycobacterium sp. JLS] gb|ABP43041.1| aromatic-ring-hydroxylating dioxygenase, beta subunit [Mycobacterium gilvum PYR-GCK] gb|ABP43120.1| aromatic-ring-hydroxylating dioxygenase, beta subunit [Mycobacterium gilvum PYR-GCK] Length = 184 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 91/170 (53%), Positives = 122/170 (71%), Gaps = 5/170 (2%) Query: 28 LKADIEDFYYREADLLDDRRFRDWLELLTDDISYFMPIRRNVKFGQQAARENTKRGEGIS 87 L+A+I DF YREADLLD+RR+ +WL LLTDD Y +P+R NV + A E T+ G I Sbjct: 20 LQAEIADFLYREADLLDERRYSEWLGLLTDDYEYSVPLRANVAYDDLAQLEQTQEGHDIC 79 Query: 88 WFDEDKWTLTKRVEQILTGVHYAEEPLSRITHMVSNVQIKGARPDVGAVRELDVTSRFLV 147 WFDE K T+ RVEQ++TG+H+AEEP+SR++H+V+NV+I+G GA E+DV+ RFLV Sbjct: 80 WFDEKKETVALRVEQLMTGLHWAEEPVSRVSHLVTNVRIEGVD---GA--EVDVSCRFLV 134 Query: 148 YQNRVEYETYIFVGRRNDTLRLTDTAWKIARREILLEQNILLAKNLTTFF 197 Y+NRV ET + VGRR D LR W++ RR +LL+Q +LLAKNL+ Sbjct: 135 YRNRVADETDLLVGRRKDRLRRVAGDWQLCRRRLLLDQTVLLAKNLSIIL 184 >ref|YP_935644.1| 3-phenylpropionate dioxygenase subunit beta [Mycobacterium sp. KMS] ref|YP_004074754.1| small subunit of phenylpropionate dioxygenase [Mycobacterium sp. Spyr1] gb|ABL94829.1| aromatic-ring-hydroxylating dioxygenase, beta subunit [Mycobacterium sp. KMS] gb|ADT96919.1| small subunit of phenylpropionate dioxygenase [Mycobacterium sp. Spyr1] Length = 184 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 90/170 (52%), Positives = 122/170 (71%), Gaps = 5/170 (2%) Query: 28 LKADIEDFYYREADLLDDRRFRDWLELLTDDISYFMPIRRNVKFGQQAARENTKRGEGIS 87 L+A+I DF YREADLLD+RR+ +WL LLT+D Y +P+R NV + A E T+ G I Sbjct: 20 LQAEIADFLYREADLLDERRYSEWLGLLTEDYEYSVPLRANVAYDDLAQLEQTQEGHDIC 79 Query: 88 WFDEDKWTLTKRVEQILTGVHYAEEPLSRITHMVSNVQIKGARPDVGAVRELDVTSRFLV 147 WFDE K T+ RVEQ++TG+H+AEEP+SR++H+V+NV+I+G GA E+DV+ RFLV Sbjct: 80 WFDEKKETVALRVEQLMTGLHWAEEPVSRVSHLVTNVRIEGVD---GA--EVDVSCRFLV 134 Query: 148 YQNRVEYETYIFVGRRNDTLRLTDTAWKIARREILLEQNILLAKNLTTFF 197 Y+NRV ET + VGRR D LR W++ RR +LL+Q +LLAKNL+ Sbjct: 135 YRNRVADETDLLVGRRKDRLRRVAGDWQLCRRRLLLDQTVLLAKNLSIIL 184