BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0187.0010.p         (60 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_887281.1| hypothetical protein BB0731 [Bordetella bronchi...    48   5e-04
ref|YP_004416770.1| hypothetical protein PT7_1606 [Pusillimonas ...    38   0.40 
gb|EGC09281.1| hypothetical protein ERIG_00193 [Escherichia ferg...    37   0.93 
ref|YP_003835576.1| KR domain-containing protein [Micromonospora...    35   2.9  

>ref|NP_887281.1| hypothetical protein BB0731 [Bordetella bronchiseptica RB50]
 emb|CAE31231.1| hypothetical protein BB0731 [Bordetella bronchiseptica RB50]
          Length = 62

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 32/54 (59%)

Query: 1  MAIKVGTRLKLAAGVVAEVEENMDDGQWLQVRYLECPARPADVGTVELCHAQDV 54
          M ++ G  L L  G   EV ENM DG W+QVR+L+   RP D G  EL H ++V
Sbjct: 5  MQLQPGQLLALRDGRKGEVVENMGDGIWVQVRWLDQEGRPLDGGEDELVHCEEV 58


>ref|YP_004416770.1| hypothetical protein PT7_1606 [Pusillimonas sp. T7-7]
 gb|AEC20146.1| hypothetical protein PT7_1606 [Pusillimonas sp. T7-7]
          Length = 69

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 23/42 (54%)

Query: 6  GTRLKLAAGVVAEVEENMDDGQWLQVRYLECPARPADVGTVE 47
          G  + LA G +AEV EN  DG WL  RYL  P  P  V + E
Sbjct: 15 GMCVSLADGAIAEVVENPQDGSWLICRYLSHPTMPELVTSRE 56


>gb|EGC09281.1| hypothetical protein ERIG_00193 [Escherichia fergusonii B253]
          Length = 58

 Score = 37.0 bits (84), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 9/56 (16%)

Query: 3  IKVGTRLKLAAGVVAEVEENMDDGQWLQVRYLECPARPADVGTVELCHAQDVIKVL 58
          IK G  L +  G   E  ENM+DGQW++V   E           EL H+QD+++VL
Sbjct: 7  IKPGDLLVIKNGRQVECSENMNDGQWIEVISSEGN---------ELIHSQDILEVL 53


>ref|YP_003835576.1| KR domain-containing protein [Micromonospora aurantiaca ATCC 27029]
 gb|ADL46000.1| KR domain protein [Micromonospora aurantiaca ATCC 27029]
          Length = 1855

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 14  GVVAEVEENMDDGQWLQVRYLECPARPADVGTVELCHAQDVIKVL 58
           G VAE EE  D G W  VR++  P R AD   V   H QDV++ L
Sbjct: 788 GAVAEAEELTDPGYW--VRHVRQPVRFADA--VRTLHQQDVVQFL 828