BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0187.0004.p         (216 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001242308.1| hypothetical protein BBta_6493 [Bradyrhizobi...   192   3e-47
ref|YP_001203679.1| putative signal peptide [Bradyrhizobium sp. ...   188   5e-46
ref|NP_767931.1| hypothetical protein bll1291 [Bradyrhizobium ja...   187   9e-46
ref|YP_771555.1| hypothetical protein pRL110521 [Rhizobium legum...    48   8e-04
gb|EFN65472.1| Retinol dehydrogenase 14 [Camponotus floridanus]        36   3.2  

>ref|YP_001242308.1| hypothetical protein BBta_6493 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38402.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 192

 Score =  192 bits (488), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 83/145 (57%), Positives = 115/145 (79%)

Query: 21  DVDLYALMSGTCRNVTVAGRSYTCKAVAYFHTLRGRSEFTVVLDDPSDKSHIISFSGEST 80
           D+DLYALMSG+CR + V GR + CK VA+FH+ +GR+ FTV LDDP+D+SHII+FSG + 
Sbjct: 38  DIDLYALMSGSCRTLKVDGRDFPCKTVAFFHSEKGRAHFTVALDDPADESHIIAFSGING 97

Query: 81  ERTQDNLFELAVDRMLLKSSDRPRVDGLPVPLVEMSTGSCRQVGSFITRQVSTITCAATD 140
            R+  N++EL +DRMLL S  RP+VDG+PVP  + S+G CRQVG+F   +V+++TC+A D
Sbjct: 98  RRSIQNVYELPIDRMLLNSKTRPKVDGIPVPATQSSSGHCRQVGNFAMLKVTSVTCSAKD 157

Query: 141 QNGKKYELSFESDGSPMTLRRLRQS 165
            +G+ YEL F SDG+P+TLRR+RQ+
Sbjct: 158 DSGRAYELQFVSDGTPITLRRVRQT 182


>ref|YP_001203679.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL75442.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS 278]
          Length = 189

 Score =  188 bits (477), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 84/151 (55%), Positives = 112/151 (74%)

Query: 21  DVDLYALMSGTCRNVTVAGRSYTCKAVAYFHTLRGRSEFTVVLDDPSDKSHIISFSGEST 80
           D+DLYALMSG+C  V V GR + CK VA+FH+ +GR+ FTV LDDP+D SHIISFSG + 
Sbjct: 35  DIDLYALMSGSCGGVKVDGREFPCKTVAFFHSEKGRAHFTVALDDPNDDSHIISFSGING 94

Query: 81  ERTQDNLFELAVDRMLLKSSDRPRVDGLPVPLVEMSTGSCRQVGSFITRQVSTITCAATD 140
            R+  N++ L +DRMLL S  RP+VDG+PVP  + S+G CRQVG+F   +V+++TC A D
Sbjct: 95  RRSVQNVYVLPIDRMLLNSKHRPKVDGIPVPAAQSSSGVCRQVGNFAMLKVTSVTCTAKD 154

Query: 141 QNGKKYELSFESDGSPMTLRRLRQSTLPSER 171
             G+ YEL F SDG+P+TLRR+RQ+   +E 
Sbjct: 155 DAGRAYELKFVSDGTPITLRRVRQTMTNAEH 185


>ref|NP_767931.1| hypothetical protein bll1291 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46556.1| bll1291 [Bradyrhizobium japonicum USDA 110]
          Length = 261

 Score =  187 bits (475), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 83/145 (57%), Positives = 110/145 (75%)

Query: 22  VDLYALMSGTCRNVTVAGRSYTCKAVAYFHTLRGRSEFTVVLDDPSDKSHIISFSGESTE 81
           +DL ALMSG C+ + VAGR+  CK VAY H   GR  F V +DDP+D +H++SFSGE+ +
Sbjct: 109 IDLLALMSGHCKTLKVAGRTLACKTVAYAHGDTGRVNFAVAVDDPTDANHVVSFSGENGK 168

Query: 82  RTQDNLFELAVDRMLLKSSDRPRVDGLPVPLVEMSTGSCRQVGSFITRQVSTITCAATDQ 141
           R  DN +EL +DRMLL S DRP+VDGLPVP  + STG CRQ G+F  R+V+ +TC+ATD 
Sbjct: 169 RADDNSYELPIDRMLLNSKDRPKVDGLPVPAEQTSTGICRQTGNFAARKVTDVTCSATDS 228

Query: 142 NGKKYELSFESDGSPMTLRRLRQST 166
            G+KYEL F SDG+P+++RR+RQS+
Sbjct: 229 EGRKYELLFVSDGTPVSVRRIRQSS 253


>ref|YP_771555.1| hypothetical protein pRL110521 [Rhizobium leguminosarum bv. viciae
           3841]
 emb|CAK03474.1| conserved hypothetical exported protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 163

 Score = 48.1 bits (113), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 55  GRSEFTVVLDDPSDKSHIISFSGESTERTQDNLFELAVDRMLLKSSDRPRVDGLPVPLVE 114
           GR  F  +LDD      I++FSG        +   + VD++++    +P+      P V 
Sbjct: 71  GRVGFYFILDD----GRIVTFSGMDAPNPTPDTDVVKVDKVIMGVKGKPKD-----PEVV 121

Query: 115 MSTGSCRQVGSFITRQVSTITCAATDQNGKKYELSFESDGSPMT 158
            +TG+C     +  +  ST++C  T  NG+++   F SDG P T
Sbjct: 122 AATGTCTYGNPY--KGESTVSCDGTMSNGQRFSARFTSDGKPPT 163


>gb|EFN65472.1| Retinol dehydrogenase 14 [Camponotus floridanus]
          Length = 332

 Score = 36.2 bits (82), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 102 RPRVDGLPVPLVEMSTGSCRQVGSFITRQVS--TITCAATDQ-NGKKYELSFESDGSPMT 158
           + R+DG  V +   ++G  ++    + ++ +   + C  TD  N  K E   ES+ + + 
Sbjct: 44  KSRMDGKTVIITGCTSGIGKETARDLAKRGARLIMACRNTDTANQLKDEFVKESNNNNIV 103

Query: 159 LRRLRQSTLPSERQRARQIAQLECRL 184
           +R+L  S+L S R+ ARQI Q E RL
Sbjct: 104 VRKLDLSSLQSIREFARQINQEESRL 129