BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0187.0003.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205444.1| hypothetical protein BRADO3429 [Bradyrhizobi... 442 e-122 ref|YP_001240233.1| hypothetical protein BBta_4276 [Bradyrhizobi... 435 e-120 ref|NP_769621.1| hypothetical protein blr2981 [Bradyrhizobium ja... 395 e-108 ref|YP_571021.1| hypothetical protein RPD_3899 [Rhodopseudomonas... 386 e-105 ref|YP_484944.1| hypothetical protein RPB_1323 [Rhodopseudomonas... 379 e-103 >ref|YP_001205444.1| hypothetical protein BRADO3429 [Bradyrhizobium sp. ORS 278] emb|CAL77217.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 278 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 203/266 (76%), Positives = 235/266 (88%) Query: 1 LEKFLATHVSRTFGASQARFGELLPAAARIALECIGNSDALYHNVEHTMLVTLAGHDIIR 60 LE+FL++++ R FG+S + E+LPAAAR+ALECIGNSDALYHNVEHT+LVTLAGH+I+R Sbjct: 12 LERFLSSYMRRRFGSSHTQLSEMLPAAARVALECIGNSDALYHNVEHTLLVTLAGHEILR 71 Query: 61 GRALHTHVTAEDYTHTIIACLTHDIGYVRGLLKGDGPDGYVIDASGNKVVLPRGSSDAGL 120 GRALH+H+TAEDY H I+ACL HDIGYVRGL K D DG+VID SG KV LPRGSSDA L Sbjct: 72 GRALHSHITAEDYVHVIMACLLHDIGYVRGLFKEDDSDGFVIDGSGRKVCLPRGSSDASL 131 Query: 121 MPYHVDRSKLYVLDRLEAVLPLDRERVARNIEGTRFPAPEGQQYDDEASIVRAADFIGQL 180 M YHVDRSKLYV++R+E + PLD++R+AR IEGTRFP GQQ+D+E SIVRAAD IGQL Sbjct: 132 MQYHVDRSKLYVINRIEGMAPLDKDRIARAIEGTRFPPLAGQQFDEEQSIVRAADLIGQL 191 Query: 181 GDPNYIRKANALYHEFEEVGINRQLGYESPADIVDRYPQFYWNMVAPHIQGAINCLNMTA 240 GDPNYIRKANALYHEFEEVGINRQLGYESPADIV+RYPQFYWN VAPHIQ I LNMT+ Sbjct: 192 GDPNYIRKANALYHEFEEVGINRQLGYESPADIVNRYPQFYWNSVAPHIQTEIRYLNMTS 251 Query: 241 SGRQWIANLYSNVFRAEREVTLSGPQ 266 +GRQWIANLY+NVFRAER+++LSGPQ Sbjct: 252 TGRQWIANLYANVFRAERDISLSGPQ 277 >ref|YP_001240233.1| hypothetical protein BBta_4276 [Bradyrhizobium sp. BTAi1] gb|ABQ36327.1| hypothetical protein BBta_4276 [Bradyrhizobium sp. BTAi1] Length = 278 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 199/266 (74%), Positives = 234/266 (87%) Query: 1 LEKFLATHVSRTFGASQARFGELLPAAARIALECIGNSDALYHNVEHTMLVTLAGHDIIR 60 LE+FL++++ R FG+SQ + E LPAAARIALECIGNSDALYHNVEHT+LVTLAGH+I+R Sbjct: 12 LEQFLSSYMRRRFGSSQTQLSEFLPAAARIALECIGNSDALYHNVEHTLLVTLAGHEILR 71 Query: 61 GRALHTHVTAEDYTHTIIACLTHDIGYVRGLLKGDGPDGYVIDASGNKVVLPRGSSDAGL 120 GRALH+H+TA+DY H I+ACL HDIGYVRGL + D DG+V+D +G K+ LPRGSSDA L Sbjct: 72 GRALHSHMTADDYVHVIMACLLHDIGYVRGLFREDDADGFVVDPAGRKICLPRGSSDASL 131 Query: 121 MPYHVDRSKLYVLDRLEAVLPLDRERVARNIEGTRFPAPEGQQYDDEASIVRAADFIGQL 180 M YHVDRSKLYV++R+E + PLD++R+AR IEGTRFP GQQ+D+E SIVRAAD IGQL Sbjct: 132 MAYHVDRSKLYVINRIEGMAPLDKDRIARAIEGTRFPPLAGQQFDEEQSIVRAADLIGQL 191 Query: 181 GDPNYIRKANALYHEFEEVGINRQLGYESPADIVDRYPQFYWNMVAPHIQGAINCLNMTA 240 GDPNYIRKANALYHEFEEVGINRQLGY+SPADIV RYPQFYWN VAPHIQ I LNMT+ Sbjct: 192 GDPNYIRKANALYHEFEEVGINRQLGYDSPADIVHRYPQFYWNSVAPHIQTEIRYLNMTS 251 Query: 241 SGRQWIANLYSNVFRAEREVTLSGPQ 266 +GRQWIANLY+NVFRAER+++LSGPQ Sbjct: 252 TGRQWIANLYANVFRAERDISLSGPQ 277 >ref|NP_769621.1| hypothetical protein blr2981 [Bradyrhizobium japonicum USDA 110] dbj|BAC48246.1| blr2981 [Bradyrhizobium japonicum USDA 110] Length = 290 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 189/266 (71%), Positives = 218/266 (81%), Gaps = 3/266 (1%) Query: 1 LEKFLATHVSRTFGASQARFGELLPAAARIALECIGNSDALYHNVEHTMLVTLAGHDIIR 60 LEK L T + R + + A ++ +A R A+ECIGNSDALYHN+EHTMLVTLAGH I+ Sbjct: 27 LEKLLGTFMRRRYDETSA---SIVESATRTAMECIGNSDALYHNIEHTMLVTLAGHSILS 83 Query: 61 GRALHTHVTAEDYTHTIIACLTHDIGYVRGLLKGDGPDGYVIDASGNKVVLPRGSSDAGL 120 GR+LHTH++A DY H +IACL HDIGYVRGL + D DG+VIDA+ K+ LPRG+SDA L Sbjct: 84 GRSLHTHLSAADYVHILIACLAHDIGYVRGLFEEDDVDGFVIDAADTKICLPRGASDASL 143 Query: 121 MPYHVDRSKLYVLDRLEAVLPLDRERVARNIEGTRFPAPEGQQYDDEASIVRAADFIGQL 180 M YHVDRSKLYV RL + LD ER+AR IEGTRFPA EGQ YDDEASI+RAADFIGQL Sbjct: 144 MMYHVDRSKLYVTRRLRHIPGLDPERIARAIEGTRFPAREGQDYDDEASILRAADFIGQL 203 Query: 181 GDPNYIRKANALYHEFEEVGINRQLGYESPADIVDRYPQFYWNMVAPHIQGAINCLNMTA 240 GDPNY+RKANALY+EFEEVG+NRQLGY+SPADIV+RYPQFYWN VAPHIQ I LN T Sbjct: 204 GDPNYLRKANALYYEFEEVGMNRQLGYDSPADIVNRYPQFYWNSVAPHIQTEIGYLNKTE 263 Query: 241 SGRQWIANLYSNVFRAEREVTLSGPQ 266 GRQWIANLYSNVFRAER+++LSGPQ Sbjct: 264 IGRQWIANLYSNVFRAERDISLSGPQ 289 >ref|YP_571021.1| hypothetical protein RPD_3899 [Rhodopseudomonas palustris BisB5] gb|ABE41120.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 281 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 182/269 (67%), Positives = 219/269 (81%), Gaps = 3/269 (1%) Query: 1 LEKFLATHVSRTFGASQARFGELLPAAARIALECIGNSDALYHNVEHTMLVTLAGHDIIR 60 L FL ++ + +GAS+A E++P+ ARIALECIGNSDALYHNVEHTMLVTLAGH I+R Sbjct: 12 LGNFLGKYMRKRYGASEAHLTEIVPSVARIALECIGNSDALYHNVEHTMLVTLAGHHILR 71 Query: 61 GRALHTHVTAEDYTHTIIACLTHDIGYVRGLLKGDGPDGYVIDASGNKVVLPRGSSDAGL 120 GRALHTH+ AEDY H II CLTHDIGYVRGL + DG DGYV+ G KV LPRG+SDA + Sbjct: 72 GRALHTHMPAEDYAHLIIGCLTHDIGYVRGLFEADGEDGYVVGTDGRKVTLPRGASDASM 131 Query: 121 MPYHVDRSKLYVLDRLEAVLPLDRERVARNIEGTRFPAP---EGQQYDDEASIVRAADFI 177 +P+HVDRSKL+VL+R+ + LD +R+A IEGTRFP +G+ ++EA+++RAAD I Sbjct: 132 LPWHVDRSKLFVLERIGGIAQLDAKRIACAIEGTRFPPQMPLDGECCEEEAALLRAADLI 191 Query: 178 GQLGDPNYIRKANALYHEFEEVGINRQLGYESPADIVDRYPQFYWNMVAPHIQGAINCLN 237 GQLGDP YIRK NALY+EFEE G+NRQLGY SPAD+++ YPQFYWN VAPHIQ AI LN Sbjct: 192 GQLGDPAYIRKTNALYYEFEEAGLNRQLGYGSPADLINLYPQFYWNNVAPHIQTAIRYLN 251 Query: 238 MTASGRQWIANLYSNVFRAEREVTLSGPQ 266 +TA GRQWIANLYSNVFRAER++ LSGPQ Sbjct: 252 VTAGGRQWIANLYSNVFRAERDIRLSGPQ 280 >ref|YP_484944.1| hypothetical protein RPB_1323 [Rhodopseudomonas palustris HaA2] gb|ABD06033.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 281 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 180/269 (66%), Positives = 217/269 (80%), Gaps = 3/269 (1%) Query: 1 LEKFLATHVSRTFGASQARFGELLPAAARIALECIGNSDALYHNVEHTMLVTLAGHDIIR 60 L FL ++ R +GAS+A E++P+ AR+ LECIGNSDALYHNVEHTMLVTLAGH I+R Sbjct: 12 LGGFLGDYMRRRYGASEAHLAEVVPSVARMTLECIGNSDALYHNVEHTMLVTLAGHHILR 71 Query: 61 GRALHTHVTAEDYTHTIIACLTHDIGYVRGLLKGDGPDGYVIDASGNKVVLPRGSSDAGL 120 GRAL+THV AEDY H II CLTHDIGYVRGL + DG DGYVIDA G K LPRG+SDA + Sbjct: 72 GRALYTHVPAEDYAHLIIGCLTHDIGYVRGLFEADGEDGYVIDAGGRKKTLPRGASDASM 131 Query: 121 MPYHVDRSKLYVLDRLEAVLPLDRERVARNIEGTRFP---APEGQQYDDEASIVRAADFI 177 +P+HVDRSKL+V R+ A+ LD R+A IEGTRFP +G+Q ++A+++RAAD I Sbjct: 132 LPWHVDRSKLFVTQRIGAIAGLDAARIACAIEGTRFPPQVPADGEQCGEDAALLRAADLI 191 Query: 178 GQLGDPNYIRKANALYHEFEEVGINRQLGYESPADIVDRYPQFYWNMVAPHIQGAINCLN 237 GQLGDP YIRKANALY+EFEE G+NR+LGY SPAD+++ YPQFYWN VAPH+Q AI LN Sbjct: 192 GQLGDPAYIRKANALYYEFEESGLNRRLGYGSPADLINLYPQFYWNSVAPHVQTAIRYLN 251 Query: 238 MTASGRQWIANLYSNVFRAEREVTLSGPQ 266 TA G+QWIA+LYSNVFRAER++ LSGPQ Sbjct: 252 ATAGGQQWIASLYSNVFRAERDIRLSGPQ 280