BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0187.0001.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_577957.1| ABC transporter related [Nitrobacter hamburgens... 229 2e-58 ref|YP_569241.1| ABC transporter-like protein [Rhodopseudomonas ... 227 8e-58 ref|NP_773129.1| ABC transporter ATP-binding protein [Bradyrhizo... 226 1e-57 ref|YP_318945.1| ABC transporter, ATPase subunit [Nitrobacter wi... 226 3e-57 ref|ZP_01045701.1| ABC transporter, ATPase subunit [Nitrobacter ... 223 2e-56 >ref|YP_577957.1| ABC transporter related [Nitrobacter hamburgensis X14] gb|ABE63497.1| ABC transporter related protein [Nitrobacter hamburgensis X14] Length = 263 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 119/183 (65%), Positives = 139/183 (75%) Query: 3 ATPLIAYAHVGKSFDSGRVVAVDDVSLDVAEGEFLAIVGGSGFGKTTLLRLANRLIEADH 62 +PLIA++HV K+F+ GRV AVDDVSLD+A GEFLA+VGGSG GKTTLLRLANRL + D Sbjct: 4 TSPLIAFSHVAKNFNGGRVRAVDDVSLDIAAGEFLAVVGGSGSGKTTLLRLANRLTDPDT 63 Query: 63 GRIAVEGEDVNRVDPILLRRRIGYVFQSGGLFPHLSVAGNIGITPHLLGWTQAEISARVD 122 G I V GED+ VDPI LRRRIGYVFQSGGLFPH+S+AGNIGITP LLG ++EI+ARVD Sbjct: 64 GTITVAGEDIAGVDPIGLRRRIGYVFQSGGLFPHMSIAGNIGITPRLLGTPKSEIAARVD 123 Query: 123 ELLDLVRLDPSQYRERMPHELSGGQRQRVGVAXRRARSAHPRRARRRLSNAAPRARPDHG 182 ELLDLV+LD +Q+ +R PHELSGGQRQRVGVA A H P R G Sbjct: 124 ELLDLVQLDRAQHHDRFPHELSGGQRQRVGVARALAAKPHIVLMDEPFGALDPMTRDALG 183 Query: 183 HDH 185 +D+ Sbjct: 184 NDY 186 >ref|YP_569241.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB5] gb|ABE39340.1| ABC transporter related [Rhodopseudomonas palustris BisB5] Length = 263 Score = 227 bits (579), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 119/161 (73%), Positives = 133/161 (82%), Gaps = 2/161 (1%) Query: 3 ATPLIAYAHVGKSFDSGRVVAVDDVSLDVAEGEFLAIVGGSGFGKTTLLRLANRLIEADH 62 A P+IAY V K+F GR+ AVD VSL VA GEFLAIVGGSG GKTTLLRLANRLI+AD Sbjct: 4 APPMIAYTRVDKTFGGGRIRAVDGVSLSVARGEFLAIVGGSGSGKTTLLRLANRLIDADA 63 Query: 63 GRIAVEGEDVNRVDPILLRRRIGYVFQSGGLFPHLSVAGNIGITPHLLGWTQAEISARVD 122 G IA+EG DV DPI+LRRRIG VFQ+G LFPHL+VAGNIGITP LLGW +A+I+ARVD Sbjct: 64 GSIAIEGADVRSTDPIVLRRRIGTVFQAGALFPHLTVAGNIGITPKLLGWPEAKIAARVD 123 Query: 123 ELLDLVRLDPSQYRERMPHELSGGQRQRVGVAXRRARSAHP 163 ELLDLVRLD +Q+R R PHELSGGQRQRVGVA RA +A P Sbjct: 124 ELLDLVRLDRAQHRGRFPHELSGGQRQRVGVA--RALAAKP 162 >ref|NP_773129.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] gb|AAN40983.1| putative ATP-binding ABC transporter protein [Bradyrhizobium japonicum] dbj|BAC51754.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 118/164 (71%), Positives = 136/164 (82%), Gaps = 4/164 (2%) Query: 1 MPATPLIAYAHVGKSFDSGRVVAVDDVSLDVAEGEFLAIVGGSGFGKTTLLRLANRLIEA 60 MP+ P I+Y+HV KSF G + AVD+VSLD+AEGEF+AIVGGSG GKTTLLRLANRLIEA Sbjct: 6 MPSKPAISYSHVTKSF--GSLKAVDNVSLDIAEGEFVAIVGGSGSGKTTLLRLANRLIEA 63 Query: 61 DHGRIAVEGEDVNRVDPILLRRRIGYVFQSGGLFPHLSVAGNIGITPHLLGWTQAEISAR 120 D G I VE EDV +DP+ LRRRIGYVFQSGGLFPHLSVA NIGITP LLG A+I+AR Sbjct: 64 DLGTITVEAEDVQNIDPVALRRRIGYVFQSGGLFPHLSVADNIGITPKLLGAPAADIAAR 123 Query: 121 VDELLDLVRLDPSQYRERMPHELSGGQRQRVGVAXRRARSAHPR 164 VDELL+LV+LD + +R+R+P LSGGQRQRVGVA RA +A PR Sbjct: 124 VDELLELVQLDRAAHRDRLPEALSGGQRQRVGVA--RALAAKPR 165 >ref|YP_318945.1| ABC transporter, ATPase subunit [Nitrobacter winogradskyi Nb-255] gb|ABA05593.1| ABC transporter, ATPase subunit [Nitrobacter winogradskyi Nb-255] Length = 263 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 115/161 (71%), Positives = 135/161 (83%), Gaps = 2/161 (1%) Query: 4 TPLIAYAHVGKSFDSGRVVAVDDVSLDVAEGEFLAIVGGSGFGKTTLLRLANRLIEADHG 63 +PLIA++HV KSF+ V AV+DVS D+A GEFLA+VGGSG GKTTLLRLANRLI+ D G Sbjct: 5 SPLIAFSHVVKSFNGSHVRAVNDVSFDIAAGEFLAVVGGSGSGKTTLLRLANRLIDPDAG 64 Query: 64 RIAVEGEDVNRVDPILLRRRIGYVFQSGGLFPHLSVAGNIGITPHLLGWTQAEISARVDE 123 I V GED+ +D I LRRRIGYVFQSGGLFPH+S+A NIGITP LLG ++EI+ARVDE Sbjct: 65 TITVAGEDIAGIDAIGLRRRIGYVFQSGGLFPHMSIAANIGITPRLLGTPKSEIAARVDE 124 Query: 124 LLDLVRLDPSQYRERMPHELSGGQRQRVGVAXRRARSAHPR 164 LLDLV+LD +QYR+R+PHELSGGQRQRVGVA RA +A PR Sbjct: 125 LLDLVQLDRAQYRDRLPHELSGGQRQRVGVA--RALAAKPR 163 >ref|ZP_01045701.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A] gb|EAQ36469.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A] Length = 268 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 116/167 (69%), Positives = 137/167 (82%), Gaps = 7/167 (4%) Query: 3 ATPLIAYAHVGKSFDSGR-----VVAVDDVSLDVAEGEFLAIVGGSGFGKTTLLRLANRL 57 +PL+A++HV KSF+ GR V AVDDVS D+A GEFLA+VGGSG GKTTLLRLANRL Sbjct: 4 TSPLVAFSHVVKSFNGGRARGGNVRAVDDVSFDIAAGEFLAVVGGSGSGKTTLLRLANRL 63 Query: 58 IEADHGRIAVEGEDVNRVDPILLRRRIGYVFQSGGLFPHLSVAGNIGITPHLLGWTQAEI 117 I+ D G I V GED+ +DPI LRRRIGYVFQSGGLFPH+++A NIGITP LLG ++EI Sbjct: 64 IDPDAGTITVAGEDIAGIDPIGLRRRIGYVFQSGGLFPHMNIAANIGITPRLLGTPKSEI 123 Query: 118 SARVDELLDLVRLDPSQYRERMPHELSGGQRQRVGVAXRRARSAHPR 164 +ARVDELLDLV+LD +Q+R+R PHELSGGQRQRVGVA RA +A PR Sbjct: 124 AARVDELLDLVQLDRAQHRDRFPHELSGGQRQRVGVA--RALAAKPR 168