BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0185.0016.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773263.1| transcriptional regulator [Bradyrhizobium japon... 301 4e-80 ref|YP_532052.1| TetR family transcriptional regulator [Rhodopse... 293 1e-77 ref|ZP_08630980.1| transcriptional regulator, TetR family [Brady... 288 5e-76 ref|YP_004108155.1| regulatory protein TetR [Rhodopseudomonas pa... 273 1e-71 ref|YP_001993033.1| TetR family transcriptional regulator [Rhodo... 272 3e-71 >ref|NP_773263.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC51888.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 211 Score = 301 bits (771), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 143/211 (67%), Positives = 171/211 (81%) Query: 1 MVAAPQTSLQSVGEEESSKRRQILDGARKVFLELGFDGASMGEIARAAGVSKGTLYVYFP 60 MV A L + EE+SSKRRQILDGARKVF++LGFDGASMGEIARAA VSKGTLYVYF Sbjct: 1 MVVAASEHLHLIQEEDSSKRRQILDGARKVFMDLGFDGASMGEIARAAQVSKGTLYVYFA 60 Query: 61 DKAGLFAAIVEEEKLEQGQVAFNFDPARDVDTTLPEFGRAYVAVLCRPGGGSAIRTVMAI 120 DK LF AI+E+E L+ GQV FNFDPARD +TTL EFGRAY+ +LCRPGGGSAIRTVMAI Sbjct: 61 DKCALFEAILEQEALQHGQVVFNFDPARDAETTLNEFGRAYIHLLCRPGGGSAIRTVMAI 120 Query: 121 AERMPELGSRFYTHVIAHTVDRFAAYLEARAALGELVIDDYQLAAWQFMQMCQATLFQAF 180 AERMP++G R+Y V+ T++R + YL+A AA G+L IDD LAA QFM++C+A+LF F Sbjct: 121 AERMPDVGRRYYARVLDKTINRLSDYLKAHAAAGDLTIDDCDLAASQFMELCKASLFLPF 180 Query: 181 IFQAKPSPSPERIATVVDSATRVFFAAYRPK 211 +FQA P+PS ER+ VV+SATR+F AAYR K Sbjct: 181 VFQAAPAPSEERMTEVVESATRMFLAAYRAK 211 >ref|YP_532052.1| TetR family transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD87733.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris BisB18] Length = 218 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 144/212 (67%), Positives = 167/212 (78%) Query: 1 MVAAPQTSLQSVGEEESSKRRQILDGARKVFLELGFDGASMGEIARAAGVSKGTLYVYFP 60 MVA +S + +E+S+KRRQILDGAR VFLELGFDGASMGEIARAAGVSKGTLYVYF Sbjct: 1 MVAFSSSSAGAPADEDSAKRRQILDGARAVFLELGFDGASMGEIARAAGVSKGTLYVYFT 60 Query: 61 DKAGLFAAIVEEEKLEQGQVAFNFDPARDVDTTLPEFGRAYVAVLCRPGGGSAIRTVMAI 120 DK+ LF AIV E LEQ ++AFNFD RD +TL +FG AY+ +LCRPGGGS+IRTVMAI Sbjct: 61 DKSALFEAIVAREVLEQAKIAFNFDVTRDTPSTLRDFGIAYIQLLCRPGGGSSIRTVMAI 120 Query: 121 AERMPELGSRFYTHVIAHTVDRFAAYLEARAALGELVIDDYQLAAWQFMQMCQATLFQAF 180 AERMPE+G R+Y +VIA +DR A YLE RA LGEL IDD+ LAA QFM+ CQATLF F Sbjct: 121 AERMPEVGKRYYHNVIALVIDRLANYLEQRAGLGELAIDDFHLAASQFMKCCQATLFMPF 180 Query: 181 IFQAKPSPSPERIATVVDSATRVFFAAYRPKQ 212 +F AKPSPS E I VVDSA R+F A Y+ K+ Sbjct: 181 LFNAKPSPSAEEIVRVVDSAIRMFLATYQVKR 212 >ref|ZP_08630980.1| transcriptional regulator, TetR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06280.1| transcriptional regulator, TetR family [Bradyrhizobiaceae bacterium SG-6C] Length = 214 Score = 288 bits (736), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 142/215 (66%), Positives = 170/215 (79%), Gaps = 3/215 (1%) Query: 1 MVAAPQTSLQSV--GEEESSKRRQILDGARKVFLELGFDGASMGEIARAAGVSKGTLYVY 58 MVAA QT L G+E+S+KR QI+DGAR+VF++LGFDGASM EIARAAGVSKGTLYVY Sbjct: 1 MVAA-QTHLSVAPQGDEDSAKRHQIMDGARRVFMDLGFDGASMNEIARAAGVSKGTLYVY 59 Query: 59 FPDKAGLFAAIVEEEKLEQGQVAFNFDPARDVDTTLPEFGRAYVAVLCRPGGGSAIRTVM 118 F DK LF AIVE+E L+QG+ AFNFDPA D +T+L FGRAY+ ++CRP GGSA+RTVM Sbjct: 60 FADKNRLFEAIVEQESLDQGKKAFNFDPALDAETSLRAFGRAYLEIVCRPDGGSAVRTVM 119 Query: 119 AIAERMPELGSRFYTHVIAHTVDRFAAYLEARAALGELVIDDYQLAAWQFMQMCQATLFQ 178 AIAERMP++G RFY HVIAHT+ YLEAR EL I D+ LAA QF+ MCQATLFQ Sbjct: 120 AIAERMPDVGRRFYDHVIAHTMRLLGDYLEARVKAKELAIGDFYLAAAQFIMMCQATLFQ 179 Query: 179 AFIFQAKPSPSPERIATVVDSATRVFFAAYRPKQA 213 ++FQ KP+P+ E+IATVVDSA RVF A YR ++ Sbjct: 180 PYVFQVKPAPNKEQIATVVDSAVRVFLAGYRASKS 214 >ref|YP_004108155.1| regulatory protein TetR [Rhodopseudomonas palustris DX-1] gb|ADU43422.1| regulatory protein TetR [Rhodopseudomonas palustris DX-1] Length = 215 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 134/196 (68%), Positives = 154/196 (78%) Query: 14 EEESSKRRQILDGARKVFLELGFDGASMGEIARAAGVSKGTLYVYFPDKAGLFAAIVEEE 73 +++S+KRRQILDGAR VFLE GFDGASMGEIARAAGVSKGTLYVYF DK LF IVE+E Sbjct: 13 DDDSAKRRQILDGARAVFLEFGFDGASMGEIARAAGVSKGTLYVYFADKNSLFCEIVEQE 72 Query: 74 KLEQGQVAFNFDPARDVDTTLPEFGRAYVAVLCRPGGGSAIRTVMAIAERMPELGSRFYT 133 + QG ++F F P RD++ TL FG AY+A++C P G SAIRTVMAIAERMPE+G R+Y Sbjct: 73 SMAQGMLSFEFVPERDIEATLRAFGSAYIALICNPRGASAIRTVMAIAERMPEIGRRYYQ 132 Query: 134 HVIAHTVDRFAAYLEARAALGELVIDDYQLAAWQFMQMCQATLFQAFIFQAKPSPSPERI 193 VIA+T+ RFA YLE + A G L IDD +LAA QFMQ CQATLF FIFQ P PERI Sbjct: 133 RVIANTIGRFARYLEGQVAAGALAIDDCELAAAQFMQACQATLFLPFIFQTAEPPCPERI 192 Query: 194 ATVVDSATRVFFAAYR 209 A VVDSATR+F AAYR Sbjct: 193 AGVVDSATRMFLAAYR 208 >ref|YP_001993033.1| TetR family transcriptional regulator [Rhodopseudomonas palustris TIE-1] gb|ACF02558.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris TIE-1] Length = 216 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 137/213 (64%), Positives = 160/213 (75%) Query: 2 VAAPQTSLQSVGEEESSKRRQILDGARKVFLELGFDGASMGEIARAAGVSKGTLYVYFPD 61 + AP ++ +E+S+KRRQILDGAR VFLE GFDGASMGEIARAAGVSKGTLYVYF D Sbjct: 1 MVAPTSAAAIHSDEDSAKRRQILDGARAVFLEFGFDGASMGEIARAAGVSKGTLYVYFAD 60 Query: 62 KAGLFAAIVEEEKLEQGQVAFNFDPARDVDTTLPEFGRAYVAVLCRPGGGSAIRTVMAIA 121 K LF IVE+E L QG ++F F P RD++ TL FG AY+A++C P G SAIRTVMAIA Sbjct: 61 KNSLFCEIVEQESLAQGMLSFEFVPDRDIEATLRAFGNAYIALICNPRGASAIRTVMAIA 120 Query: 122 ERMPELGSRFYTHVIAHTVDRFAAYLEARAALGELVIDDYQLAAWQFMQMCQATLFQAFI 181 ERMPE+G R+Y VIA+T+ RF YL+A+ A G L ID+ LAA QFMQ CQATLF FI Sbjct: 121 ERMPEIGRRYYERVIANTIGRFGRYLQAQVAAGVLQIDNCDLAAAQFMQACQATLFLPFI 180 Query: 182 FQAKPSPSPERIATVVDSATRVFFAAYRPKQAS 214 FQ PSP RIA VVDSAT +F AAYR +AS Sbjct: 181 FQTSEPPSPARIAGVVDSATALFLAAYRAPKAS 213