BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0098.p (751 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206412.1| DNA topoisomerase IV subunit A [Bradyrhizobi... 1337 0.0 ref|YP_001240601.1| DNA topoisomerase IV subunit A [Bradyrhizobi... 1334 0.0 ref|NP_771697.1| DNA topoisomerase IV subunit A [Bradyrhizobium ... 1334 0.0 ref|YP_577499.1| DNA topoisomerase IV subunit A [Nitrobacter ham... 1330 0.0 ref|ZP_01047254.1| DNA topoisomerase IV subunit A [Nitrobacter s... 1330 0.0 >ref|YP_001206412.1| DNA topoisomerase IV subunit A [Bradyrhizobium sp. ORS 278] emb|CAL78191.1| DNA topoisomerase IV, subunit A [Bradyrhizobium sp. ORS 278] Length = 750 Score = 1337 bits (3460), Expect = 0.0, Method: Compositional matrix adjust. Identities = 643/751 (85%), Positives = 698/751 (92%), Gaps = 1/751 (0%) Query: 1 MGKRQIPPEEPAEIHEVPLRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMDL 60 MGK IPPE PAEIHEV LRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGM L Sbjct: 1 MGKSLIPPE-PAEIHEVALRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMRL 59 Query: 61 LGLDPRAAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG 120 L LDP AFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG Sbjct: 60 LRLDPGTAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG 119 Query: 121 DNPAAYRYTEARMTEVARLLLDGIDEDGVEFRLNYDGQSKEPVVLPGGFPNLLANGAQGI 180 DNPAAYRYTEARMT+VARLLL+GIDEDGVEFR NYDGQSKEPVVLPGGFPNLLANGAQGI Sbjct: 120 DNPAAYRYTEARMTDVARLLLEGIDEDGVEFRPNYDGQSKEPVVLPGGFPNLLANGAQGI 179 Query: 181 AVGMATSIPPHNAAELCDAALHLIEKPDAKSKALLKWVKGPDFPTGGIVVDSKEAIVEAY 240 AVGMATSIPPHNAAELCDAALHLIEKPDAKS+ALL+WVKGPDFPTGG V+DSKE+I+EAY Sbjct: 180 AVGMATSIPPHNAAELCDAALHLIEKPDAKSRALLRWVKGPDFPTGGTVIDSKESIIEAY 239 Query: 241 TTGRGSFRTRSRWTQEEGARGTWVVVVTEIPWLVQKSRIVEKIAELINEKKLPLVADVRD 300 TTGRGSFR R++W QEEG RGTWVVV+TEIP+LVQKSR+VEKIAEL+NEKKLPLV DVRD Sbjct: 240 TTGRGSFRVRAKWKQEEGNRGTWVVVITEIPFLVQKSRLVEKIAELLNEKKLPLVGDVRD 299 Query: 301 ESAEDVRLVIEPKSRTVDPALMMESLFRLTELESKISLNLNVLIKGRIPKVVGLAECLRE 360 ESAEDVRLVIEPKS+ VDPALMMESLFRLT+LESKI LNLNVLIKG+IPKVVGLAECLRE Sbjct: 300 ESAEDVRLVIEPKSKNVDPALMMESLFRLTDLESKIPLNLNVLIKGKIPKVVGLAECLRE 359 Query: 361 WLDHLRDVLVRRSNFRRTQIEHRLEVLGGHLVAYLNLDKVIKIIRTEDEPKPVLMKTFKL 420 WLDHLRDVL+RRSN+R+ QIE+RLE+LGG+L+AYLN+D+VI+IIRTEDEPKPVLMKTFKL Sbjct: 360 WLDHLRDVLLRRSNYRKKQIENRLEILGGYLIAYLNIDEVIRIIRTEDEPKPVLMKTFKL 419 Query: 421 SEIQADAILNMRLRNLRRLEEMEIRTEDKDLRKELKGIEGLLASETEQWAKVGDQVRKVR 480 +E+QA+AILNMRLR+LR+LEEMEIRTEDK+LR ELKGI LL SE QWAKVG+QV+ VR Sbjct: 420 TEVQAEAILNMRLRSLRKLEEMEIRTEDKNLRGELKGINELLGSEPLQWAKVGEQVKTVR 479 Query: 481 DIFGPKTPLGKRRTTFADAPEHDLAAIEEALVEREPCTVVISEKGWVRTLKGHVEDLSGL 540 D+FGPKTPLGKRRT FADAPEHDLAAIEEA +EREP TVV+SEKGWVRTLKGHV DLS L Sbjct: 480 DMFGPKTPLGKRRTNFADAPEHDLAAIEEAFIEREPVTVVVSEKGWVRTLKGHVADLSNL 539 Query: 541 AFKTDDKLEHSFFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIRMFIDLEQDAAII 600 FKTDD+L SFFAE TSK+LLFATNGKFYSLDV KLPGGRGHGEPIRMFIDL+QDA+I+ Sbjct: 540 QFKTDDQLGQSFFAENTSKVLLFATNGKFYSLDVGKLPGGRGHGEPIRMFIDLDQDASIV 599 Query: 601 SLFVNKGERKFLIASSEGQGFIVKEEDCVGNTRKGKQVLNVEMPNEARAITTVNGDTVAV 660 S+FV KGERKFL+A+S+GQGF+VKEEDCV NTRKGKQVLNV P EARAI TV GD VAV Sbjct: 600 SMFVTKGERKFLVAASDGQGFVVKEEDCVSNTRKGKQVLNVTAPAEARAICTVTGDQVAV 659 Query: 661 IGTNHKMVLFGLDQVPEMARGRGVRLQKYTSASLSDVAVFDAKTGLTWKDSAGREHSMTM 720 IGTNHKMV+FGLDQVPEMARGRGVRLQKYTSA LSDV F+ K GL WKDSAGR+ ++ Sbjct: 660 IGTNHKMVVFGLDQVPEMARGRGVRLQKYTSAQLSDVTTFEQKQGLAWKDSAGRDQGLSW 719 Query: 721 KELADWRGNRADAGRLAHGLPKSNKFNRGVE 751 KELAD+RGNRADAGR+A GLPKSNKFNR +E Sbjct: 720 KELADYRGNRADAGRIAQGLPKSNKFNRPIE 750 >ref|YP_001240601.1| DNA topoisomerase IV subunit A [Bradyrhizobium sp. BTAi1] gb|ABQ36695.1| DNA topoisomerase IV subunit A [Bradyrhizobium sp. BTAi1] Length = 750 Score = 1334 bits (3453), Expect = 0.0, Method: Compositional matrix adjust. Identities = 640/751 (85%), Positives = 700/751 (93%), Gaps = 1/751 (0%) Query: 1 MGKRQIPPEEPAEIHEVPLRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMDL 60 MGK IPPE PAEIHEV LR+ALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGM L Sbjct: 1 MGKSLIPPE-PAEIHEVALREALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMRL 59 Query: 61 LGLDPRAAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG 120 L LDP AFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG Sbjct: 60 LRLDPGTAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG 119 Query: 121 DNPAAYRYTEARMTEVARLLLDGIDEDGVEFRLNYDGQSKEPVVLPGGFPNLLANGAQGI 180 DN AAYRYTEARMT+VARLLL+GIDEDGVEFR NYDGQSKEPVVLPGGFPNLLANGAQGI Sbjct: 120 DNAAAYRYTEARMTDVARLLLEGIDEDGVEFRPNYDGQSKEPVVLPGGFPNLLANGAQGI 179 Query: 181 AVGMATSIPPHNAAELCDAALHLIEKPDAKSKALLKWVKGPDFPTGGIVVDSKEAIVEAY 240 AVGMATSIPPHNAAELCDAALHLIEKPDAKS+ALL+WVKGPDFPTGG V+DSKE+I+EAY Sbjct: 180 AVGMATSIPPHNAAELCDAALHLIEKPDAKSRALLRWVKGPDFPTGGTVIDSKESIIEAY 239 Query: 241 TTGRGSFRTRSRWTQEEGARGTWVVVVTEIPWLVQKSRIVEKIAELINEKKLPLVADVRD 300 TTGRGSFR R++W QEEG RGTW+VV+TEIP+LVQKSR+VEKIAEL+NEKKLPLV DVRD Sbjct: 240 TTGRGSFRVRAKWKQEEGNRGTWIVVITEIPYLVQKSRLVEKIAELLNEKKLPLVGDVRD 299 Query: 301 ESAEDVRLVIEPKSRTVDPALMMESLFRLTELESKISLNLNVLIKGRIPKVVGLAECLRE 360 ESAEDVRLVIEPKS+ VDPALMMESLFRLT+LESKI LNLNVLIKG+IPKVVGLAECLRE Sbjct: 300 ESAEDVRLVIEPKSKNVDPALMMESLFRLTDLESKIPLNLNVLIKGKIPKVVGLAECLRE 359 Query: 361 WLDHLRDVLVRRSNFRRTQIEHRLEVLGGHLVAYLNLDKVIKIIRTEDEPKPVLMKTFKL 420 WLDHLRDVL+RRSN+R+ QIE+RLE+LGG+L+AYLN+D+VI+IIRTEDEPKPVLMKTFKL Sbjct: 360 WLDHLRDVLLRRSNYRKKQIENRLEILGGYLIAYLNIDEVIRIIRTEDEPKPVLMKTFKL 419 Query: 421 SEIQADAILNMRLRNLRRLEEMEIRTEDKDLRKELKGIEGLLASETEQWAKVGDQVRKVR 480 +E+QA+AILNMRLR+LR+LEEMEIRTEDK+LR ELKGI LLASE QWAKVG+QV+ VR Sbjct: 420 TEVQAEAILNMRLRSLRKLEEMEIRTEDKNLRGELKGINELLASEQVQWAKVGEQVKTVR 479 Query: 481 DIFGPKTPLGKRRTTFADAPEHDLAAIEEALVEREPCTVVISEKGWVRTLKGHVEDLSGL 540 D+FGPKTPLG+RRT FADAPEHDLAAIEEA +EREP TVV+SEKGWVRTLKGHV DLS L Sbjct: 480 DLFGPKTPLGRRRTNFADAPEHDLAAIEEAFIEREPVTVVVSEKGWVRTLKGHVADLSNL 539 Query: 541 AFKTDDKLEHSFFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIRMFIDLEQDAAII 600 FKTDD+L +FFAE TSK+LLFA+NGKFYSLDV KLPGGRGHGEPIRMFIDL+QDA+I+ Sbjct: 540 QFKTDDQLGQAFFAENTSKVLLFASNGKFYSLDVGKLPGGRGHGEPIRMFIDLDQDASIV 599 Query: 601 SLFVNKGERKFLIASSEGQGFIVKEEDCVGNTRKGKQVLNVEMPNEARAITTVNGDTVAV 660 S+FV+KGERKFLIA+S+GQGF+VKEEDCV NTRKGKQVLNV P EARAITTV GD VAV Sbjct: 600 SMFVSKGERKFLIAASDGQGFVVKEEDCVSNTRKGKQVLNVTAPAEARAITTVQGDQVAV 659 Query: 661 IGTNHKMVLFGLDQVPEMARGRGVRLQKYTSASLSDVAVFDAKTGLTWKDSAGREHSMTM 720 IGTNHKMV+FGLDQVPEMARGRGVRLQKYTSA LSDV F+ K GL WKDSAGR+ ++ Sbjct: 660 IGTNHKMVVFGLDQVPEMARGRGVRLQKYTSAQLSDVTTFEQKQGLAWKDSAGRDQGLSW 719 Query: 721 KELADWRGNRADAGRLAHGLPKSNKFNRGVE 751 KELAD+RGNRADAGR+A GLPKSNKFNR +E Sbjct: 720 KELADYRGNRADAGRIAQGLPKSNKFNRPIE 750 >ref|NP_771697.1| DNA topoisomerase IV subunit A [Bradyrhizobium japonicum USDA 110] dbj|BAC50322.1| topoisomerase II [Bradyrhizobium japonicum USDA 110] Length = 751 Score = 1334 bits (3452), Expect = 0.0, Method: Compositional matrix adjust. Identities = 647/752 (86%), Positives = 697/752 (92%), Gaps = 2/752 (0%) Query: 1 MGKRQIPPEEPAEIHEVPLRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMDL 60 MGKR IPPE PAEIHEVPLR+ALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGM L Sbjct: 1 MGKRLIPPE-PAEIHEVPLREALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMRL 59 Query: 61 LGLDPRAAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG 120 L LDP AFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG Sbjct: 60 LRLDPGTAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG 119 Query: 121 DNPAAYRYTEARMTEVARLLLDGIDEDGVEFRLNYDGQSKEPVVLPGGFPNLLANGAQGI 180 DNPAAYRYTEARMT+VARLLL+GIDEDGVEFR NYDGQSKEP+VLPGGFPNLLANGAQGI Sbjct: 120 DNPAAYRYTEARMTDVARLLLEGIDEDGVEFRPNYDGQSKEPIVLPGGFPNLLANGAQGI 179 Query: 181 AVGMATSIPPHNAAELCDAALHLIEKPDAKSKALLKWVKGPDFPTGGIVVDSKEAIVEAY 240 AVGMATSIPPHNAAELCDAALHLIEKPDAKSKALLKWVKGPDFPTGGI VDSK+AI EAY Sbjct: 180 AVGMATSIPPHNAAELCDAALHLIEKPDAKSKALLKWVKGPDFPTGGICVDSKQAIAEAY 239 Query: 241 TTGRGSFRTRSRWTQEEGARGTWVVVVTEIPWLVQKSRIVEKIAELINEKKLPLVADVRD 300 TTGRGSFR R+RW QEEGARGTWVVVVTEIP+LVQKSR++EKIAEL ++KKLPLV DVRD Sbjct: 240 TTGRGSFRVRARWEQEEGARGTWVVVVTEIPFLVQKSRLIEKIAELQDQKKLPLVGDVRD 299 Query: 301 ESAEDVRLVIEPKSRTVDPALMMESLFRLTELESKISLNLNVLIKGRIPKVVGLAECLRE 360 ESAEDVR+VIEPKS+ VDPALMMESLFRLTELE+KI LNLNVLIKGRIPKVVGLAECLRE Sbjct: 300 ESAEDVRIVIEPKSKNVDPALMMESLFRLTELENKIPLNLNVLIKGRIPKVVGLAECLRE 359 Query: 361 WLDHLRDVLVRRSNFRRTQIEHRLEVLGGHLVAYLNLDKVIKIIRTEDEPKPVLMKTFKL 420 WLDHLRDVL+RRSN+R+ QIEHRLEVLGG L+AYLN+DKVIKIIRTEDEPKP LMK FKL Sbjct: 360 WLDHLRDVLIRRSNYRKAQIEHRLEVLGGFLIAYLNIDKVIKIIRTEDEPKPALMKAFKL 419 Query: 421 SEIQADAILNMRLRNLRRLEEMEIRTEDKDLRKELKGIEGLLASETEQWAKVGDQVRKVR 480 +E+QA+AILNMRLR+LR+LEEMEIRTEDK+LR ELKGI +LASE EQW KVG+QV KVR Sbjct: 420 TEVQAEAILNMRLRSLRKLEEMEIRTEDKNLRNELKGINAVLASEAEQWKKVGEQVGKVR 479 Query: 481 DIFGPKTPLGKRRTTFADAPEHDLAAIEEALVEREPCTVVISEKGWVRTLKGHVEDLSGL 540 D+FGPKTPLGKRRTTFADAPEHDLAAIEEA VEREP TVV+S+KGW+RT+KGHVEDLSGL Sbjct: 480 DMFGPKTPLGKRRTTFADAPEHDLAAIEEAFVEREPVTVVVSDKGWIRTMKGHVEDLSGL 539 Query: 541 AFKTDDKLEHSFFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIRMFIDLEQDAAII 600 AFK DD+L +FFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIR+FIDLEQ+AA + Sbjct: 540 AFKQDDRLGFAFFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIRLFIDLEQEAAPV 599 Query: 601 SLFVNKGERKFLIASSEGQGFIVKEEDCVGNTRKGKQVLNVEMPNEARAITTVNGDTVAV 660 +LFVNKG RKFL+AS EGQGF+V E+DCVG T+KGKQVLNV+MPNEAR +T V GDTVAV Sbjct: 600 ALFVNKGGRKFLVASHEGQGFVVNEDDCVGTTKKGKQVLNVDMPNEARTVTEVVGDTVAV 659 Query: 661 IGTNHKMVLFGLDQVPEMARGRGVRLQKYTSASLSDVAVFDAKTGLTWKDSAGREHSMTM 720 IG N KM++F LDQ+PEMARGRGVRLQKY LSDV VFDAK GLTWKDSAGRE S TM Sbjct: 660 IGENRKMLVFPLDQIPEMARGRGVRLQKYKDGGLSDVVVFDAKAGLTWKDSAGREFSATM 719 Query: 721 KELADWRGNRADAGRL-AHGLPKSNKFNRGVE 751 KELA+W+G RADAGRL G PKSNKF RG+E Sbjct: 720 KELAEWQGTRADAGRLPPKGFPKSNKFGRGIE 751 >ref|YP_577499.1| DNA topoisomerase IV subunit A [Nitrobacter hamburgensis X14] gb|ABE63039.1| DNA topoisomerase IV subunit A [Nitrobacter hamburgensis X14] Length = 749 Score = 1330 bits (3441), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/750 (84%), Positives = 697/750 (92%), Gaps = 1/750 (0%) Query: 1 MGKRQIPPEEPAEIHEVPLRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMDL 60 MGKR IP E PAEIH+V LRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGM L Sbjct: 1 MGKRLIPAE-PAEIHDVQLRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMRL 59 Query: 61 LGLDPRAAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG 120 L LDP +AFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDF+SRYPLVDGQGNFGNIDG Sbjct: 60 LRLDPGSAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFASRYPLVDGQGNFGNIDG 119 Query: 121 DNPAAYRYTEARMTEVARLLLDGIDEDGVEFRLNYDGQSKEPVVLPGGFPNLLANGAQGI 180 DNPAAYRYTEARMT+VARLLL+GIDED VEFR NYDGQ++EPVVLPGGFPNLLANGAQGI Sbjct: 120 DNPAAYRYTEARMTDVARLLLEGIDEDAVEFRPNYDGQTREPVVLPGGFPNLLANGAQGI 179 Query: 181 AVGMATSIPPHNAAELCDAALHLIEKPDAKSKALLKWVKGPDFPTGGIVVDSKEAIVEAY 240 AVGMAT+IPPHNAAELCDAALHLI+KPDA SK+LL+WVKGPDFPTGGI++DSKE+I EAY Sbjct: 180 AVGMATAIPPHNAAELCDAALHLIDKPDATSKSLLRWVKGPDFPTGGIIIDSKESITEAY 239 Query: 241 TTGRGSFRTRSRWTQEEGARGTWVVVVTEIPWLVQKSRIVEKIAELINEKKLPLVADVRD 300 TGRG+FRTR++W QEEGARGTWV+VVTEIPWLVQKSR++EKIAEL+NEKKLPLV D+RD Sbjct: 240 MTGRGAFRTRAKWNQEEGARGTWVIVVTEIPWLVQKSRLIEKIAELLNEKKLPLVGDIRD 299 Query: 301 ESAEDVRLVIEPKSRTVDPALMMESLFRLTELESKISLNLNVLIKGRIPKVVGLAECLRE 360 ESAED+R+VIEPKSR VDP L+MESLF+LTELES+ISLNLNVLIKG+IPKVVGLAECLRE Sbjct: 300 ESAEDIRVVIEPKSRNVDPELVMESLFKLTELESRISLNLNVLIKGKIPKVVGLAECLRE 359 Query: 361 WLDHLRDVLVRRSNFRRTQIEHRLEVLGGHLVAYLNLDKVIKIIRTEDEPKPVLMKTFKL 420 WLDHLRDVL+RRS +R+ QIEHRLEVLGG+L+AYLN+DKVIKIIRTEDEPKP LMK FKL Sbjct: 360 WLDHLRDVLLRRSAYRKAQIEHRLEVLGGYLIAYLNIDKVIKIIRTEDEPKPALMKAFKL 419 Query: 421 SEIQADAILNMRLRNLRRLEEMEIRTEDKDLRKELKGIEGLLASETEQWAKVGDQVRKVR 480 +E+QA+AILNMRLR+LR+LEEMEIRTEDK+LR ELKGI +L SE QW KV +QVR VR Sbjct: 420 TEVQAEAILNMRLRSLRKLEEMEIRTEDKNLRAELKGINAVLGSEARQWEKVAEQVRTVR 479 Query: 481 DIFGPKTPLGKRRTTFADAPEHDLAAIEEALVEREPCTVVISEKGWVRTLKGHVEDLSGL 540 D+FGPKTPLGKRRT FADAPEHDLAA+EE+LVEREP TVV+S+KGWVRTLKGHVEDLS L Sbjct: 480 DMFGPKTPLGKRRTVFADAPEHDLAALEESLVEREPVTVVLSDKGWVRTLKGHVEDLSSL 539 Query: 541 AFKTDDKLEHSFFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIRMFIDLEQDAAII 600 +FKT+DKL +FFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIR+FID+EQDAAI+ Sbjct: 540 SFKTNDKLGFAFFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIRLFIDMEQDAAIV 599 Query: 601 SLFVNKGERKFLIASSEGQGFIVKEEDCVGNTRKGKQVLNVEMPNEARAITTVNGDTVAV 660 SLFVN G RKFLIAS EGQGFIV E+DCVG TRKGKQVLNVEMPNEA+AI TV GD VAV Sbjct: 600 SLFVNTGGRKFLIASHEGQGFIVNEDDCVGTTRKGKQVLNVEMPNEAKAIVTVAGDQVAV 659 Query: 661 IGTNHKMVLFGLDQVPEMARGRGVRLQKYTSASLSDVAVFDAKTGLTWKDSAGREHSMTM 720 IGTNHKMV+F LDQVPEMARGRGVRLQKY A LSDVAVFD+K GLTWKDSAGRE + Sbjct: 660 IGTNHKMVIFPLDQVPEMARGRGVRLQKYKDAGLSDVAVFDSKAGLTWKDSAGREQGLRW 719 Query: 721 KELADWRGNRADAGRLAHGLPKSNKFNRGV 750 K+L+DWRGNRADAGRLAHGLPKSN+F R + Sbjct: 720 KDLSDWRGNRADAGRLAHGLPKSNRFGRTI 749 >ref|ZP_01047254.1| DNA topoisomerase IV subunit A [Nitrobacter sp. Nb-311A] gb|EAQ34836.1| DNA topoisomerase IV subunit A [Nitrobacter sp. Nb-311A] Length = 749 Score = 1330 bits (3441), Expect = 0.0, Method: Compositional matrix adjust. Identities = 638/750 (85%), Positives = 700/750 (93%), Gaps = 1/750 (0%) Query: 1 MGKRQIPPEEPAEIHEVPLRDALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMDL 60 MGKR IP E PAEIHEV LR+ALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGM L Sbjct: 1 MGKRLIPAE-PAEIHEVQLREALEERYLAYALSTIMHRALPDARDGLKPVHRRILYGMRL 59 Query: 61 LGLDPRAAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFSSRYPLVDGQGNFGNIDG 120 L LDP +AFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDF+SRYPLVDGQGNFGNIDG Sbjct: 60 LRLDPGSAFKKSAKIVGDVMGSFHPHGDQAIYDAMVRLAQDFASRYPLVDGQGNFGNIDG 119 Query: 121 DNPAAYRYTEARMTEVARLLLDGIDEDGVEFRLNYDGQSKEPVVLPGGFPNLLANGAQGI 180 DNPAAYRYTEARMT+VARLLLDGIDED VEFR NYDGQS+EPVVLPGGFPNLLANGAQGI Sbjct: 120 DNPAAYRYTEARMTDVARLLLDGIDEDAVEFRPNYDGQSREPVVLPGGFPNLLANGAQGI 179 Query: 181 AVGMATSIPPHNAAELCDAALHLIEKPDAKSKALLKWVKGPDFPTGGIVVDSKEAIVEAY 240 AVGMAT+IPPHNAAELCDAALHLI+KPDAK KALLKWVKGPDFPTGGI++DSKE+I +AY Sbjct: 180 AVGMATAIPPHNAAELCDAALHLIDKPDAKPKALLKWVKGPDFPTGGIIIDSKESIADAY 239 Query: 241 TTGRGSFRTRSRWTQEEGARGTWVVVVTEIPWLVQKSRIVEKIAELINEKKLPLVADVRD 300 TTGRG+FRTR++W +E+GARGTWV+VVT+IPWLVQKSR++EKIAEL+N+KKLPLV D+RD Sbjct: 240 TTGRGAFRTRAKWHREDGARGTWVIVVTQIPWLVQKSRLIEKIAELLNDKKLPLVGDIRD 299 Query: 301 ESAEDVRLVIEPKSRTVDPALMMESLFRLTELESKISLNLNVLIKGRIPKVVGLAECLRE 360 ESAED+R+VIEPKSR VDP L+MESLF+LTELES+ISLNLNVLIKGRIPKVVGLAECLRE Sbjct: 300 ESAEDIRVVIEPKSRNVDPELVMESLFKLTELESRISLNLNVLIKGRIPKVVGLAECLRE 359 Query: 361 WLDHLRDVLVRRSNFRRTQIEHRLEVLGGHLVAYLNLDKVIKIIRTEDEPKPVLMKTFKL 420 WLDHLRDVL+RRS R+ QIEHRLEVLGG+L+AYLN+DKVIKIIRTEDEPKP L+K FKL Sbjct: 360 WLDHLRDVLLRRSAHRKAQIEHRLEVLGGYLIAYLNIDKVIKIIRTEDEPKPALIKAFKL 419 Query: 421 SEIQADAILNMRLRNLRRLEEMEIRTEDKDLRKELKGIEGLLASETEQWAKVGDQVRKVR 480 +E+QADAILNMRLR+LR+LEEMEIRTEDK+LR ELKGI +L SE QW KVG+QVR VR Sbjct: 420 TEVQADAILNMRLRSLRKLEEMEIRTEDKNLRAELKGINAVLGSEARQWEKVGEQVRNVR 479 Query: 481 DIFGPKTPLGKRRTTFADAPEHDLAAIEEALVEREPCTVVISEKGWVRTLKGHVEDLSGL 540 D+FGPKTPLGKRRT FADAPEHDLAA+EE+LVEREP TVV+S+KGWVRTLKGHVEDLS L Sbjct: 480 DMFGPKTPLGKRRTVFADAPEHDLAALEESLVEREPVTVVVSDKGWVRTLKGHVEDLSNL 539 Query: 541 AFKTDDKLEHSFFAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIRMFIDLEQDAAII 600 +FKTDDKL +F AETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIR+FIDLEQDAAI+ Sbjct: 540 SFKTDDKLGFAFLAETTSKLLLFATNGKFYSLDVAKLPGGRGHGEPIRLFIDLEQDAAIV 599 Query: 601 SLFVNKGERKFLIASSEGQGFIVKEEDCVGNTRKGKQVLNVEMPNEARAITTVNGDTVAV 660 SLFVN G RKFLIAS EGQGF+V E+DCVG TRKGKQVL+VEMPNEA+AITTV GD VAV Sbjct: 600 SLFVNTGGRKFLIASHEGQGFVVNEDDCVGTTRKGKQVLSVEMPNEAKAITTVAGDQVAV 659 Query: 661 IGTNHKMVLFGLDQVPEMARGRGVRLQKYTSASLSDVAVFDAKTGLTWKDSAGREHSMTM 720 IGTNHKMV+F LDQVPEMARGRGVRLQKY A LSDVAVFD+KTGLTW+DSAGRE ++ Sbjct: 660 IGTNHKMVIFPLDQVPEMARGRGVRLQKYRDAGLSDVAVFDSKTGLTWRDSAGREQGLSW 719 Query: 721 KELADWRGNRADAGRLAHGLPKSNKFNRGV 750 K+L+DWRGNRADAGRLAHGLPKSNKF R + Sbjct: 720 KDLSDWRGNRADAGRLAHGLPKSNKFGRTI 749