BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0184.0094.p         (120 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001240615.1| hypothetical protein BBta_4681 [Bradyrhizobi...   178   3e-43
ref|NP_771699.1| hypothetical protein bll5059 [Bradyrhizobium ja...   172   1e-41
ref|YP_001206423.1| hypothetical protein BRADO4461 [Bradyrhizobi...   172   2e-41
ref|YP_532511.1| hypothetical protein RPC_2642 [Rhodopseudomonas...   140   5e-32
ref|YP_781937.1| hypothetical protein RPE_3020 [Rhodopseudomonas...   132   2e-29

>ref|YP_001240615.1| hypothetical protein BBta_4681 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36709.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 126

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 87/120 (72%), Positives = 97/120 (80%)

Query: 1   VLWFEVLLYLSLTLDALSVAFQDRTPTILKTEQMIMGETLTAGCMILLLMYFVRLAAQHR 60
           VLWFEVLLY+SL LDALSVA  DRTP+   TE MI  +T+  G +ILLL YFV LAAQ R
Sbjct: 7   VLWFEVLLYISLMLDALSVAVSDRTPSFDMTEDMITAQTVLNGAIILLLFYFVYLAAQRR 66

Query: 61  KNWPRWALLAVLVLSVMSLVQVIGARGMEIDSAIEVVSCILTTAGLYYSFTGDARGWFNA 120
           KNWPRW +LA LVLS MSLVQVIG +GM +D+ IEV+SC LTT GLYYSFTGDARGWFNA
Sbjct: 67  KNWPRWVILAALVLSDMSLVQVIGQKGMTLDAGIEVISCALTTIGLYYSFTGDARGWFNA 126


>ref|NP_771699.1| hypothetical protein bll5059 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50324.1| bll5059 [Bradyrhizobium japonicum USDA 110]
          Length = 126

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 86/117 (73%), Positives = 96/117 (82%)

Query: 4   FEVLLYLSLTLDALSVAFQDRTPTILKTEQMIMGETLTAGCMILLLMYFVRLAAQHRKNW 63
           FE LLY SL LDALSVA QDRTP    TEQMIM  TL AG MILLL+YFV LAA  RKNW
Sbjct: 10  FEALLYASLMLDALSVAVQDRTPNAEMTEQMIMTATLLAGGMILLLVYFVWLAAHWRKNW 69

Query: 64  PRWALLAVLVLSVMSLVQVIGARGMEIDSAIEVVSCILTTAGLYYSFTGDARGWFNA 120
           PRW L A LVLSV+SL Q+IG +GME+DSAIE+VSC+LTT GLY+SF+GDA+GWFNA
Sbjct: 70  PRWVLAAALVLSVISLGQIIGEKGMELDSAIEIVSCVLTTMGLYFSFSGDAQGWFNA 126


>ref|YP_001206423.1| hypothetical protein BRADO4461 [Bradyrhizobium sp. ORS 278]
 emb|CAL78202.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
          Length = 126

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/120 (70%), Positives = 96/120 (80%)

Query: 1   VLWFEVLLYLSLTLDALSVAFQDRTPTILKTEQMIMGETLTAGCMILLLMYFVRLAAQHR 60
           VLWFEVLLY SL LDALSVA  DRTPT+  TE MI  +T+  G +ILL+ YFV LAAQ R
Sbjct: 7   VLWFEVLLYSSLMLDALSVAVSDRTPTLEITEDMITAQTILNGVVILLMFYFVYLAAQRR 66

Query: 61  KNWPRWALLAVLVLSVMSLVQVIGARGMEIDSAIEVVSCILTTAGLYYSFTGDARGWFNA 120
           KNWPRW LLA LVLS +SLVQVIG +GM +D+ IEV+SC LT  GLYYSFTGDARGWF+A
Sbjct: 67  KNWPRWVLLAALVLSGVSLVQVIGDKGMTLDAGIEVISCALTAMGLYYSFTGDARGWFDA 126


>ref|YP_532511.1| hypothetical protein RPC_2642 [Rhodopseudomonas palustris BisB18]
 gb|ABD88192.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 126

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/116 (59%), Positives = 83/116 (71%)

Query: 4   FEVLLYLSLTLDALSVAFQDRTPTILKTEQMIMGETLTAGCMILLLMYFVRLAAQHRKNW 63
           FE LLY SL LDALSVAFQDRTPT   ++ +IM   L A  +I+ L+Y V LAAQ RKNW
Sbjct: 10  FEALLYASLGLDALSVAFQDRTPTAEISDGIIMAANLIAAGLIVALVYLVWLAAQQRKNW 69

Query: 64  PRWALLAVLVLSVMSLVQVIGARGMEIDSAIEVVSCILTTAGLYYSFTGDARGWFN 119
           PRW L   L LS +SL Q+IG  G++ DS +E+VS +LT  GLY SFTGDA+ WFN
Sbjct: 70  PRWVLTGSLALSAVSLAQIIGDSGLQFDSWLEIVSTMLTATGLYLSFTGDAKDWFN 125


>ref|YP_781937.1| hypothetical protein RPE_3020 [Rhodopseudomonas palustris BisA53]
 gb|ABJ06957.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 126

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 90/116 (77%)

Query: 4   FEVLLYLSLTLDALSVAFQDRTPTILKTEQMIMGETLTAGCMILLLMYFVRLAAQHRKNW 63
           F  LLY SL LDALSVAFQDRTP+   T+ +IM   L A  +I++L+Y VRLAA+ R+ W
Sbjct: 10  FAALLYASLGLDALSVAFQDRTPSGQITDGVIMMAHLIAAALIMVLVYLVRLAAEERRRW 69

Query: 64  PRWALLAVLVLSVMSLVQVIGARGMEIDSAIEVVSCILTTAGLYYSFTGDARGWFN 119
           PR  L+  LVLSV+SL+Q++G  G++ DSAIE+VSC LT AGLYY+FTGDA+GWFN
Sbjct: 70  PRTLLVVSLVLSVLSLIQIVGDAGLQFDSAIELVSCALTGAGLYYAFTGDAKGWFN 125