BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0093.p (307 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771700.1| GTP-binding protein Era [Bradyrhizobium japonic... 548 e-154 ref|YP_001206424.1| GTP-binding protein Era [Bradyrhizobium sp. ... 537 e-151 gb|AAD02940.2| GTP-binding protein Era [Bradyrhizobium japonicum] 537 e-150 ref|YP_001240616.1| GTP-binding protein Era [Bradyrhizobium sp. ... 536 e-150 ref|YP_318529.1| GTP-binding protein Era [Nitrobacter winogradsk... 527 e-148 >ref|NP_771700.1| GTP-binding protein Era [Bradyrhizobium japonicum USDA 110] sp|O69162.3|ERA_BRAJA RecName: Full=GTPase Era dbj|BAC50325.1| GTP-binding protein Era [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 267/308 (86%), Positives = 285/308 (92%), Gaps = 1/308 (0%) Query: 1 MTDEAKGQGDA-TRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIE 59 MT EA G+ A TRCGFVALIGAPNVGKSTLVNALVG+KVTIVSRKVQTTRALIRGIVIE Sbjct: 1 MTVEASGEAPAATRCGFVALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIE 60 Query: 60 GNAQIILVDTPGIFAPRRRLDRAMVSTAWSGAHDADLVCVLLDAKSGLDEEANAILAKLE 119 NAQIILVDTPGIF+P+RRLDRAMVSTAWSGAHDADLVCVLLDAK+G+DEEA AILAK Sbjct: 61 NNAQIILVDTPGIFSPKRRLDRAMVSTAWSGAHDADLVCVLLDAKTGIDEEAEAILAKAA 120 Query: 120 TVAHPKILVLNKVDLVQREKLLALAQAANERMRFEHTFMISALSGDGVADLRQTLAKLVP 179 +V H KILV+NKVDLVQREKLLALAQAANERM F TFMI+A+SGDGV DLR TLA++VP Sbjct: 121 SVNHDKILVINKVDLVQREKLLALAQAANERMPFAKTFMIAAISGDGVDDLRSTLAEMVP 180 Query: 180 AGPFLYPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWTDRKDKSIRIEQT 239 GPFLYPEDQMSDAPMRHLAAEITREKIY LHQELPYQSTVETD W +RKDKS+RIEQT Sbjct: 181 PGPFLYPEDQMSDAPMRHLAAEITREKIYRKLHQELPYQSTVETDKWEERKDKSVRIEQT 240 Query: 240 IFVERESQRKIVLGKGGATIKSIGAQARAEIAEIMGVPVHLFLFVKVRENWGDDPDRYKE 299 IFVERESQRKIVLGKGGATIKSIGA +R EI+EI+GVPVHLFLFVKVRENWGDDPDRY+E Sbjct: 241 IFVERESQRKIVLGKGGATIKSIGADSRKEISEILGVPVHLFLFVKVRENWGDDPDRYRE 300 Query: 300 MGLEFPKE 307 MGLEFPKE Sbjct: 301 MGLEFPKE 308 >ref|YP_001206424.1| GTP-binding protein Era [Bradyrhizobium sp. ORS 278] sp|A4YWC7.1|ERA_BRASO RecName: Full=GTPase Era emb|CAL78203.1| GTP-binding protein (era) [Bradyrhizobium sp. ORS 278] Length = 307 Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust. Identities = 261/307 (85%), Positives = 280/307 (91%) Query: 1 MTDEAKGQGDATRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEG 60 MT E + ATRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEG Sbjct: 1 MTAEQQAGQGATRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEG 60 Query: 61 NAQIILVDTPGIFAPRRRLDRAMVSTAWSGAHDADLVCVLLDAKSGLDEEANAILAKLET 120 +QIILVDTPGIF+P+RRLDRAMV+TAWSGAHDADLVCVLLDAK GLD+EA AI+ K + Sbjct: 61 QSQIILVDTPGIFSPKRRLDRAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAIIDKAAS 120 Query: 121 VAHPKILVLNKVDLVQREKLLALAQAANERMRFEHTFMISALSGDGVADLRQTLAKLVPA 180 VAH KILV+NKVDLV REKLLAL AANE++ F TFMISALSGDGV DLR+ LA++VP Sbjct: 121 VAHEKILVVNKVDLVPREKLLALVAAANEKLAFARTFMISALSGDGVDDLRRALAEMVPP 180 Query: 181 GPFLYPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWTDRKDKSIRIEQTI 240 GPF YPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWT+R D SIRIEQTI Sbjct: 181 GPFHYPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWTERNDGSIRIEQTI 240 Query: 241 FVERESQRKIVLGKGGATIKSIGAQARAEIAEIMGVPVHLFLFVKVRENWGDDPDRYKEM 300 FVER+SQRKIVLGKGGATIKSIGAQ+R EIAEI GVPVHLFLFVKVRENWGDDPDRY+EM Sbjct: 241 FVERDSQRKIVLGKGGATIKSIGAQSRKEIAEITGVPVHLFLFVKVRENWGDDPDRYREM 300 Query: 301 GLEFPKE 307 GLEFP+E Sbjct: 301 GLEFPRE 307 >gb|AAD02940.2| GTP-binding protein Era [Bradyrhizobium japonicum] Length = 309 Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust. Identities = 265/309 (85%), Positives = 282/309 (91%), Gaps = 2/309 (0%) Query: 1 MTDEAKGQGDA-TRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIE 59 MT EA G+ A TRCGFVALIGAPNVGKSTLVNALVG+KVTIVSRKVQTTRALIRGIVIE Sbjct: 1 MTVEASGEAPAATRCGFVALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIE 60 Query: 60 GNAQIILVDTPGIFAPRRRLDRAMVSTAWSGAHDADLVCVLLDAKSGLDEEANAILAKLE 119 NAQIILVDTPGIF+P+RRLDRAMVSTAWSGAHDADLVCVLLDAK+G+DEEA AILAK Sbjct: 61 NNAQIILVDTPGIFSPKRRLDRAMVSTAWSGAHDADLVCVLLDAKTGIDEEAEAILAKAA 120 Query: 120 TVAHPKILVLNKVDLVQREKLLALAQAANERMRFEHTFMISALSGDGVADLRQTLAKLVP 179 +V H KILV+NKVDLVQREKLLALAQAANERM F TFMI+A+SGDGV DLR TLA++VP Sbjct: 121 SVNHDKILVINKVDLVQREKLLALAQAANERMPFAKTFMIAAISGDGVDDLRSTLAEMVP 180 Query: 180 AGPFLYPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVET-DSWTDRKDKSIRIEQ 238 GPFLYPEDQMSDAPMRHLAAEITREKIY LHQELPYQSTVET W RK KS+RIEQ Sbjct: 181 PGPFLYPEDQMSDAPMRHLAAEITREKIYRKLHQELPYQSTVETARKWEARKAKSVRIEQ 240 Query: 239 TIFVERESQRKIVLGKGGATIKSIGAQARAEIAEIMGVPVHLFLFVKVRENWGDDPDRYK 298 TIFVERESQRKIVLGKGGATIKSIGA +R EI+EI+GVPVHLFLFVKVRENWGDDPDRY+ Sbjct: 241 TIFVERESQRKIVLGKGGATIKSIGADSRKEISEILGVPVHLFLFVKVRENWGDDPDRYR 300 Query: 299 EMGLEFPKE 307 EMGLEFPKE Sbjct: 301 EMGLEFPKE 309 >ref|YP_001240616.1| GTP-binding protein Era [Bradyrhizobium sp. BTAi1] sp|A5EKL6.1|ERA_BRASB RecName: Full=GTPase Era gb|ABQ36710.1| GTP-binding protein (era) [Bradyrhizobium sp. BTAi1] Length = 308 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 260/305 (85%), Positives = 278/305 (91%) Query: 3 DEAKGQGDATRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGNA 62 ++ G G TRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEG + Sbjct: 4 EQHAGPGAETRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGTS 63 Query: 63 QIILVDTPGIFAPRRRLDRAMVSTAWSGAHDADLVCVLLDAKSGLDEEANAILAKLETVA 122 QIILVDTPGIF+P+RRLDRAMV+TAWSGAHDADLVCVLLDAK GLD+EA AI+ K VA Sbjct: 64 QIILVDTPGIFSPKRRLDRAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAIIDKAAAVA 123 Query: 123 HPKILVLNKVDLVQREKLLALAQAANERMRFEHTFMISALSGDGVADLRQTLAKLVPAGP 182 H KILV+NKVDLV REKLLAL AANE++ F TFMISALSGDGV DL+Q LA +VP GP Sbjct: 124 HQKILVVNKVDLVPREKLLALVAAANEKLPFARTFMISALSGDGVDDLKQALAAMVPPGP 183 Query: 183 FLYPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWTDRKDKSIRIEQTIFV 242 F YPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWT+RKD SIRIEQTIFV Sbjct: 184 FHYPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWTERKDGSIRIEQTIFV 243 Query: 243 ERESQRKIVLGKGGATIKSIGAQARAEIAEIMGVPVHLFLFVKVRENWGDDPDRYKEMGL 302 ER+SQRKIVLGKGGATIKSIGAQ+R EIAEI GVPVHLFLFVKVRENWGDDPDRY+EMGL Sbjct: 244 ERDSQRKIVLGKGGATIKSIGAQSRKEIAEITGVPVHLFLFVKVRENWGDDPDRYREMGL 303 Query: 303 EFPKE 307 EFP+E Sbjct: 304 EFPRE 308 >ref|YP_318529.1| GTP-binding protein Era [Nitrobacter winogradskyi Nb-255] gb|ABA05177.1| GTP-binding protein Era [Nitrobacter winogradskyi Nb-255] Length = 303 Score = 527 bits (1358), Expect = e-148, Method: Compositional matrix adjust. Identities = 254/299 (84%), Positives = 274/299 (91%) Query: 9 GDATRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGNAQIILVD 68 G +RCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIE NAQIILVD Sbjct: 5 GPTSRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIENNAQIILVD 64 Query: 69 TPGIFAPRRRLDRAMVSTAWSGAHDADLVCVLLDAKSGLDEEANAILAKLETVAHPKILV 128 TPGIF P+RRLDRAMVSTAWSGAHDADLVCVLLDA++G+DEEA+AIL KL VAHPKILV Sbjct: 65 TPGIFVPKRRLDRAMVSTAWSGAHDADLVCVLLDARAGIDEEADAILTKLAGVAHPKILV 124 Query: 129 LNKVDLVQREKLLALAQAANERMRFEHTFMISALSGDGVADLRQTLAKLVPAGPFLYPED 188 LNK+DLV+REKLLALA +ANER+ FE TFM+SALSGDGV DLR LA VP GPF YPED Sbjct: 125 LNKIDLVRREKLLALAGSANERLGFEETFMVSALSGDGVDDLRLALAGRVPEGPFHYPED 184 Query: 189 QMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWTDRKDKSIRIEQTIFVERESQR 248 QMSDAP+RHLAAEITREKIY HLHQELPYQSTVETD+WT+R DKS+RIEQTIFVER+SQR Sbjct: 185 QMSDAPLRHLAAEITREKIYRHLHQELPYQSTVETDTWTERNDKSVRIEQTIFVERDSQR 244 Query: 249 KIVLGKGGATIKSIGAQARAEIAEIMGVPVHLFLFVKVRENWGDDPDRYKEMGLEFPKE 307 KIVLGK GATIKSIGA +R EI EI+G PVHLFLFVKVRE WGDDP+RY+EMGLEFPKE Sbjct: 245 KIVLGKNGATIKSIGASSRKEIGEIIGQPVHLFLFVKVREKWGDDPNRYREMGLEFPKE 303