BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0088.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771704.1| pyridoxine 5'-phosphate synthase [Bradyrhizobiu... 444 e-123 ref|YP_001206428.1| pyridoxine 5'-phosphate synthase [Bradyrhizo... 434 e-120 gb|AAD02936.2| PdxJ [Bradyrhizobium japonicum] 433 e-119 ref|YP_001240620.1| pyridoxine 5'-phosphate synthase [Bradyrhizo... 428 e-118 ref|ZP_08630216.1| pyridoxine 5'-phosphate synthase [Bradyrhizob... 412 e-113 >ref|NP_771704.1| pyridoxine 5'-phosphate synthase [Bradyrhizobium japonicum USDA 110] sp|O69158.3|PDXJ_BRAJA RecName: Full=Pyridoxine 5'-phosphate synthase; Short=PNP synthase dbj|BAC50329.1| pyridoxal phosphate biosynthetic protein [Bradyrhizobium japonicum USDA 110] Length = 250 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 217/250 (86%), Positives = 236/250 (94%) Query: 7 MSSPPLRLGINVDHVATLRNARGGARPDPVRLALAAIEAGADGITAHLREDRRHIRDEDM 66 M + PLRLG+NVDHVATLRNARGG PDPVR AL AIEAGADGITAHLREDRRHIRDEDM Sbjct: 1 MPASPLRLGVNVDHVATLRNARGGRNPDPVRAALLAIEAGADGITAHLREDRRHIRDEDM 60 Query: 67 ARLKAEISKPLNFEMAATDDMLRISLATKPHAVCLVPERRQELTTEGGLDVVGQHNALAP 126 ARLKAEISKPLNFEMAATDDM+RISLAT+PHAVCLVPERRQE+TTEGGLDVVGQHNALAP Sbjct: 61 ARLKAEISKPLNFEMAATDDMMRISLATRPHAVCLVPERRQEVTTEGGLDVVGQHNALAP 120 Query: 127 FIARLNDAGIRVSLFIAADPRQIEMAAKLKAPVIEIHTGGWCDAVVDGHKDKAEAEWQRI 186 +IARLNDAGIRVSLFIAADP QIEMAA+L+APVIEIHTG WCDAVVDGH +KA+AEW+RI Sbjct: 121 YIARLNDAGIRVSLFIAADPAQIEMAARLRAPVIEIHTGAWCDAVVDGHTEKADAEWKRI 180 Query: 187 VAGARLAQAAGLEVHAGHGLDYDTAETISALPEIRELNIGYFMMGEALFVGIAGTVREMR 246 VAGA+LA+ AGLEVHAGHGLDY TAETI+ALP+I ELNIGY+M+GEALFVG+A TVR MR Sbjct: 181 VAGAKLAKDAGLEVHAGHGLDYATAETIAALPDIMELNIGYYMIGEALFVGLAETVRSMR 240 Query: 247 AAMDRGRARA 256 AAMDRGR+RA Sbjct: 241 AAMDRGRSRA 250 >ref|YP_001206428.1| pyridoxine 5'-phosphate synthase [Bradyrhizobium sp. ORS 278] sp|A4YWD1.1|PDXJ_BRASO RecName: Full=Pyridoxine 5'-phosphate synthase; Short=PNP synthase emb|CAL78207.1| pyridoxal phosphate biosynthetic protein PdxJ (PNP synthase) [Bradyrhizobium sp. ORS 278] Length = 256 Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust. Identities = 215/256 (83%), Positives = 236/256 (92%), Gaps = 1/256 (0%) Query: 7 MSSPP-LRLGINVDHVATLRNARGGARPDPVRLALAAIEAGADGITAHLREDRRHIRDED 65 MS PP LRLG+NVDH+ATLRNARGG PDPVR AL AIEAGADGITAHLREDRRHIRD+D Sbjct: 1 MSHPPKLRLGVNVDHIATLRNARGGRAPDPVRAALLAIEAGADGITAHLREDRRHIRDDD 60 Query: 66 MARLKAEISKPLNFEMAATDDMLRISLATKPHAVCLVPERRQELTTEGGLDVVGQHNALA 125 MARLKA+IS+PLNFEMAAT++M+RI+LATKPHA CLVPERR+ELTTEGGLDVVGQHNALA Sbjct: 61 MARLKAQISRPLNFEMAATEEMVRIALATKPHACCLVPERREELTTEGGLDVVGQHNALA 120 Query: 126 PFIARLNDAGIRVSLFIAADPRQIEMAAKLKAPVIEIHTGGWCDAVVDGHKDKAEAEWQR 185 P IARL++AGIRVSLFIAADP QIEMAA+L+APVIEIHTGGWCDA+ DGH DKA+AEWQR Sbjct: 121 PAIARLSEAGIRVSLFIAADPAQIEMAARLRAPVIEIHTGGWCDAITDGHHDKADAEWQR 180 Query: 186 IVAGARLAQAAGLEVHAGHGLDYDTAETISALPEIRELNIGYFMMGEALFVGIAGTVREM 245 IVAGAR A AAGLEVHAGHGLDY TAE I+ALPEIRELNIGYF+MGEALFVG+A +VR M Sbjct: 181 IVAGARQAYAAGLEVHAGHGLDYATAEQIAALPEIRELNIGYFIMGEALFVGLAESVRTM 240 Query: 246 RAAMDRGRARAQGAIS 261 RAAMDRGR RA GA + Sbjct: 241 RAAMDRGRDRATGATA 256 >gb|AAD02936.2| PdxJ [Bradyrhizobium japonicum] Length = 249 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 214/250 (85%), Positives = 233/250 (93%), Gaps = 1/250 (0%) Query: 7 MSSPPLRLGINVDHVATLRNARGGARPDPVRLALAAIEAGADGITAHLREDRRHIRDEDM 66 M + PLRLG+NVDHVATLRNARGG PDPVR AL AIEAGADGITAHLREDRRHIRDEDM Sbjct: 1 MPASPLRLGVNVDHVATLRNARGGRNPDPVRAALLAIEAGADGITAHLREDRRHIRDEDM 60 Query: 67 ARLKAEISKPLNFEMAATDDMLRISLATKPHAVCLVPERRQELTTEGGLDVVGQHNALAP 126 ARLKAEISKPLNFEMAATDDM+RISLAT+PHAVCLVPERRQE+TTEGGLDVVGQHNALAP Sbjct: 61 ARLKAEISKPLNFEMAATDDMMRISLATRPHAVCLVPERRQEVTTEGGLDVVGQHNALAP 120 Query: 127 FIARLNDAGIRVSLFIAADPRQIEMAAKLKAPVIEIHTGGWCDAVVDGHKDKAEAEWQRI 186 +IARLNDAGIRVSLFIAADP QIEMAA+L+APVIEIHTG WCDAVVDGH +KA+AEW+RI Sbjct: 121 YIARLNDAGIRVSLFIAADPAQIEMAARLRAPVIEIHTGAWCDAVVDGHTEKADAEWKRI 180 Query: 187 VAGARLAQAAGLEVHAGHGLDYDTAETISALPEIRELNIGYFMMGEALFVGIAGTVREMR 246 VAGA +A+ AGLEVHAGHGLDY TAETI+ALP+I ELNIGY+M+GEALFVG+A TVR Sbjct: 181 VAGANVAKDAGLEVHAGHGLDYATAETIAALPDIMELNIGYYMIGEALFVGLAETVRNA- 239 Query: 247 AAMDRGRARA 256 AAMDRGR+RA Sbjct: 240 AAMDRGRSRA 249 >ref|YP_001240620.1| pyridoxine 5'-phosphate synthase [Bradyrhizobium sp. BTAi1] gb|ABQ36714.1| pyridoxine 5'-phosphate synthase [Bradyrhizobium sp. BTAi1] Length = 257 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/247 (85%), Positives = 227/247 (91%) Query: 10 PPLRLGINVDHVATLRNARGGARPDPVRLALAAIEAGADGITAHLREDRRHIRDEDMARL 69 P LRLG+NVDHVATLRNARGG PDPVR AL AIEAGADGITAHLREDRRHIRD+DMARL Sbjct: 10 PKLRLGVNVDHVATLRNARGGRSPDPVRAALLAIEAGADGITAHLREDRRHIRDDDMARL 69 Query: 70 KAEISKPLNFEMAATDDMLRISLATKPHAVCLVPERRQELTTEGGLDVVGQHNALAPFIA 129 KAEI+KPLNFEMAATD+M+RI+LAT+PHA CLVPERR+ELTTEGGLDVVGQHNALAP IA Sbjct: 70 KAEIAKPLNFEMAATDEMVRIALATRPHACCLVPERREELTTEGGLDVVGQHNALAPAIA 129 Query: 130 RLNDAGIRVSLFIAADPRQIEMAAKLKAPVIEIHTGGWCDAVVDGHKDKAEAEWQRIVAG 189 RLNDAGIRVSLFIAADP QIEMAA+L+APVIEIHTGGWCDA+ DGH DKA EW+RIVAG Sbjct: 130 RLNDAGIRVSLFIAADPAQIEMAARLRAPVIEIHTGGWCDAIADGHHDKAATEWERIVAG 189 Query: 190 ARLAQAAGLEVHAGHGLDYDTAETISALPEIRELNIGYFMMGEALFVGIAGTVREMRAAM 249 ARLA +AGLEVHAGHGLDY TAE I+ALPEI ELNIGYFMMGEALFVG+ +VR MR AM Sbjct: 190 ARLAYSAGLEVHAGHGLDYTTAEQIAALPEIVELNIGYFMMGEALFVGLPQSVRSMRVAM 249 Query: 250 DRGRARA 256 DRGR+RA Sbjct: 250 DRGRSRA 256 >ref|ZP_08630216.1| pyridoxine 5'-phosphate synthase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07089.1| pyridoxine 5'-phosphate synthase [Bradyrhizobiaceae bacterium SG-6C] Length = 256 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 200/244 (81%), Positives = 221/244 (90%) Query: 10 PPLRLGINVDHVATLRNARGGARPDPVRLALAAIEAGADGITAHLREDRRHIRDEDMARL 69 PPLRLG+NVDHVATLRNARGG PDPVR AL AIE+GADGITAHLREDRRHIRDEDM RL Sbjct: 5 PPLRLGVNVDHVATLRNARGGRLPDPVRAALLAIESGADGITAHLREDRRHIRDEDMKRL 64 Query: 70 KAEISKPLNFEMAATDDMLRISLATKPHAVCLVPERRQELTTEGGLDVVGQHNALAPFIA 129 KAEIS+PLNFEMAAT +ML+I+L T PHAVCLVPERR E+TTEGGLDV GQ +AL PFIA Sbjct: 65 KAEISRPLNFEMAATAEMLQIALGTAPHAVCLVPERRTEVTTEGGLDVAGQRDALGPFIA 124 Query: 130 RLNDAGIRVSLFIAADPRQIEMAAKLKAPVIEIHTGGWCDAVVDGHKDKAEAEWQRIVAG 189 RLNDAGIRVSLFIAADP QIEMAAKLK+PVIEIHTG WCDAV + + EAEWQ+IVAG Sbjct: 125 RLNDAGIRVSLFIAADPAQIEMAAKLKSPVIEIHTGAWCDAVTEKRTSQIEAEWQKIVAG 184 Query: 190 ARLAQAAGLEVHAGHGLDYDTAETISALPEIRELNIGYFMMGEALFVGIAGTVREMRAAM 249 A+LA++AGLEVHAGHGLDY TAETI+ALPEI ELNIG+FMMGEA+FVG++ TVR+MRAAM Sbjct: 185 AKLAKSAGLEVHAGHGLDYVTAETIAALPEIVELNIGHFMMGEAMFVGLSQTVRDMRAAM 244 Query: 250 DRGR 253 DRGR Sbjct: 245 DRGR 248