BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0038.p (391 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771737.1| acyl CoA dehydrogenase [Bradyrhizobium japonicu... 673 0.0 ref|YP_577533.1| acyl-CoA dehydrogenase-like [Nitrobacter hambur... 667 0.0 ref|YP_318617.1| acyl-CoA dehydrogenase [Nitrobacter winogradsky... 622 e-176 ref|ZP_08630243.1| acyl-CoA dehydrogenase [Bradyrhizobiaceae bac... 620 e-175 ref|YP_001206459.1| isovaleryl CoA dehydrogenase [Bradyrhizobium... 619 e-175 >ref|NP_771737.1| acyl CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC50362.1| acyl CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 547 Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/373 (85%), Positives = 345/373 (92%) Query: 15 MTQAPFATHDVFNQSPPFENVDLFTVDAPLAAAVAANGGAAATAELSDFGKHWGSAAMAE 74 MTQ FATH+VFNQSP F +VDLF VD PL AV ANGGA A ELS+FGKHWGSAAMA+ Sbjct: 1 MTQPSFATHEVFNQSPLFWDVDLFAVDRPLVEAVKANGGAKAERELSEFGKHWGSAAMAD 60 Query: 75 RGRVANENTPKLRLFDARGNRRDEVEFHPAYHELMAHSAHAGVHNSTWSADGKPAGGAAE 134 RGRVANENTPKLR FDA+GNRRD+VEFHPAYHELMAHSAHAGVHNSTW+ADGKPAG AAE Sbjct: 61 RGRVANENTPKLRTFDAKGNRRDQVEFHPAYHELMAHSAHAGVHNSTWTADGKPAGDAAE 120 Query: 135 VVRAAKFYIASQVETGHLCPITMTRASVAALASQPDILAKTMPVIGTRAYDPTFAPWWTK 194 V+RAAKFYIASQVETGHLCPITMTRASVAALA+QPD+LA+ MPV+ T++YDPTFAPWW K Sbjct: 121 VIRAAKFYIASQVETGHLCPITMTRASVAALATQPDLLARVMPVLATKSYDPTFAPWWGK 180 Query: 195 RGMTLGMGMTEKQGGTDVRANMTRAERDGGAWRVTGHKWFMSAPMCDAFLVLAQTMDGLS 254 RGMTLG+GMTEKQGGTDVRANMTRA RDG A+R+TGHKWFMSAPMCDAFLVLAQ +GL+ Sbjct: 181 RGMTLGIGMTEKQGGTDVRANMTRAVRDGDAYRITGHKWFMSAPMCDAFLVLAQADEGLT 240 Query: 255 CFFMPRFAPDGTVNAIHFQRLKDKLGNRSNASSEVEFHGAHAELIGEEGKGIRTIIQMVQ 314 CFFMPRFAPDG+VNAI FQRLKDKLGNRSNASSEVEF GA+A+ +GE GKGIRTIIQMVQ Sbjct: 241 CFFMPRFAPDGSVNAIQFQRLKDKLGNRSNASSEVEFAGAYAQAVGEAGKGIRTIIQMVQ 300 Query: 315 LTRQDCAIASAGLMRSGLAHALNHARHRSVFQKHLADQPLMQAVLSDMALHVEASIALVM 374 LTRQDCAIAS GLMRSGLAHAL+HARHRSVFQKHLADQPLMQAVLSDMALHVEAS+ALVM Sbjct: 301 LTRQDCAIASTGLMRSGLAHALHHARHRSVFQKHLADQPLMQAVLSDMALHVEASVALVM 360 Query: 375 RLCRAFDRAPADA 387 RLCRAFDR P DA Sbjct: 361 RLCRAFDRTPHDA 373 >ref|YP_577533.1| acyl-CoA dehydrogenase-like [Nitrobacter hamburgensis X14] gb|ABE63073.1| acyl-CoA dehydrogenase-like protein [Nitrobacter hamburgensis X14] Length = 547 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/373 (84%), Positives = 344/373 (92%) Query: 15 MTQAPFATHDVFNQSPPFENVDLFTVDAPLAAAVAANGGAAATAELSDFGKHWGSAAMAE 74 MTQ F TH+VFNQSPP E+VDLF +DAPLA AVAANGG AA+ ELS+FG+HWGSAAMA Sbjct: 1 MTQPAFKTHEVFNQSPPLEDVDLFALDAPLAEAVAANGGKAASGELSEFGRHWGSAAMAS 60 Query: 75 RGRVANENTPKLRLFDARGNRRDEVEFHPAYHELMAHSAHAGVHNSTWSADGKPAGGAAE 134 RGR+ANEN PKLRLFDA GNRRDEVEFHPAYHELMAHSAHAG+HNSTW+ADGKPAGGAAE Sbjct: 61 RGRLANENPPKLRLFDACGNRRDEVEFHPAYHELMAHSAHAGLHNSTWTADGKPAGGAAE 120 Query: 135 VVRAAKFYIASQVETGHLCPITMTRASVAALASQPDILAKTMPVIGTRAYDPTFAPWWTK 194 VVRAA+FY+A+QVETGHLCPITMTRASVAALA+ P +LAK MP+I TR+YDP+FAPW TK Sbjct: 121 VVRAARFYMAAQVETGHLCPITMTRASVAALATGPQVLAKAMPLIATRSYDPSFAPWSTK 180 Query: 195 RGMTLGMGMTEKQGGTDVRANMTRAERDGGAWRVTGHKWFMSAPMCDAFLVLAQTMDGLS 254 RGMTLGMGMTEKQGGTDVRAN TRAERDGGA+R+TGHKWFMSAPMCDAFLVLAQ GL+ Sbjct: 181 RGMTLGMGMTEKQGGTDVRANQTRAERDGGAYRITGHKWFMSAPMCDAFLVLAQADGGLT 240 Query: 255 CFFMPRFAPDGTVNAIHFQRLKDKLGNRSNASSEVEFHGAHAELIGEEGKGIRTIIQMVQ 314 CFFMPRF PDG+VN IHFQRLKDKLGNRSNASSEVEF GA+AE +GEEGKGIRTIIQMVQ Sbjct: 241 CFFMPRFQPDGSVNEIHFQRLKDKLGNRSNASSEVEFTGAYAERVGEEGKGIRTIIQMVQ 300 Query: 315 LTRQDCAIASAGLMRSGLAHALNHARHRSVFQKHLADQPLMQAVLSDMALHVEASIALVM 374 LTRQDCAIAS GLMRSGLAHAL+H R+RSVFQKHLADQPLMQAVL+DMALHVEAS+ALVM Sbjct: 301 LTRQDCAIASVGLMRSGLAHALHHTRYRSVFQKHLADQPLMQAVLADMALHVEASVALVM 360 Query: 375 RLCRAFDRAPADA 387 RLCRAFD A DA Sbjct: 361 RLCRAFDEASTDA 373 >ref|YP_318617.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] gb|ABA05265.1| acyl-CoA dehydrogenase [Nitrobacter winogradskyi Nb-255] Length = 546 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 309/372 (83%), Positives = 338/372 (90%), Gaps = 1/372 (0%) Query: 15 MTQAPFATHDVFNQSPPFENVDLFTVDAPLAAAVAANGGAAATAELSDFGKHWGSAAMAE 74 MTQ PF TH+V NQSPPFE+VDLFT+D PLA AVAANGGAAA ++ FGKHWGS+AMA Sbjct: 1 MTQ-PFRTHEVLNQSPPFEDVDLFTLDRPLAEAVAANGGAAARDDMKAFGKHWGSSAMAA 59 Query: 75 RGRVANENTPKLRLFDARGNRRDEVEFHPAYHELMAHSAHAGVHNSTWSADGKPAGGAAE 134 RGR+ANEN PK RLFDARGNRRDEVEFHP+YHELMAHSAHAG+HNSTW+ADG+PA GAAE Sbjct: 60 RGRLANENPPKPRLFDARGNRRDEVEFHPSYHELMAHSAHAGLHNSTWTADGRPAAGAAE 119 Query: 135 VVRAAKFYIASQVETGHLCPITMTRASVAALASQPDILAKTMPVIGTRAYDPTFAPWWTK 194 VVRAAKFY+A+QVETGHLCPITMTRASVA LA+QPD+LA+TMPVI TR+YDP FAPW TK Sbjct: 120 VVRAAKFYMAAQVETGHLCPITMTRASVATLAAQPDLLAETMPVIATRSYDPLFAPWRTK 179 Query: 195 RGMTLGMGMTEKQGGTDVRANMTRAERDGGAWRVTGHKWFMSAPMCDAFLVLAQTMDGLS 254 RGMTLGMGMTEKQGGTDVRAN TRA RDG A+RVTGHKWFMSAPMCDAFLVLAQ GL+ Sbjct: 180 RGMTLGMGMTEKQGGTDVRANQTRAVRDGDAYRVTGHKWFMSAPMCDAFLVLAQAEGGLT 239 Query: 255 CFFMPRFAPDGTVNAIHFQRLKDKLGNRSNASSEVEFHGAHAELIGEEGKGIRTIIQMVQ 314 CFFMPRF PDG+VNAIH QRLKDKLGNRSNAS+EVEF A+A +GEEGKGIR I+QMVQ Sbjct: 240 CFFMPRFRPDGSVNAIHLQRLKDKLGNRSNASAEVEFIEAYARRVGEEGKGIRAILQMVQ 299 Query: 315 LTRQDCAIASAGLMRSGLAHALNHARHRSVFQKHLADQPLMQAVLSDMALHVEASIALVM 374 LTRQDCAIASAGLMRSGLAHAL+HARHRSVF+K L DQPLMQAVL+DMAL VEAS+ALVM Sbjct: 300 LTRQDCAIASAGLMRSGLAHALHHARHRSVFRKRLVDQPLMQAVLADMALQVEASVALVM 359 Query: 375 RLCRAFDRAPAD 386 RLCRAFD AP+D Sbjct: 360 RLCRAFDEAPSD 371 >ref|ZP_08630243.1| acyl-CoA dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07116.1| acyl-CoA dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] Length = 549 Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust. Identities = 290/365 (79%), Positives = 328/365 (89%) Query: 22 THDVFNQSPPFENVDLFTVDAPLAAAVAANGGAAATAELSDFGKHWGSAAMAERGRVANE 81 T DVFNQSPPFE+VDLFT+D+ LA AVA NGG A AEL+DFG+HWGSAAMA+RGR+ANE Sbjct: 9 TTDVFNQSPPFEDVDLFTLDSALAEAVAVNGGKGAGAELADFGRHWGSAAMAQRGRLANE 68 Query: 82 NTPKLRLFDARGNRRDEVEFHPAYHELMAHSAHAGVHNSTWSADGKPAGGAAEVVRAAKF 141 NTPKL +D+RG RRDEVEFHPAYHELMAHSAHAG+HNSTW+ G+ AGG++EVVR AKF Sbjct: 69 NTPKLNTYDSRGFRRDEVEFHPAYHELMAHSAHAGIHNSTWNEKGETAGGSSEVVRGAKF 128 Query: 142 YIASQVETGHLCPITMTRASVAALASQPDILAKTMPVIGTRAYDPTFAPWWTKRGMTLGM 201 +IASQVETGHLCPITMTRA+V AL+ P + AK MPV+G+R+YDPTFAPWW KRGMT+GM Sbjct: 129 FIASQVETGHLCPITMTRAAVGALSVDPGLRAKVMPVLGSRSYDPTFAPWWIKRGMTMGM 188 Query: 202 GMTEKQGGTDVRANMTRAERDGGAWRVTGHKWFMSAPMCDAFLVLAQTMDGLSCFFMPRF 261 GMTEKQGGTDVRAN+TRA RDG A+R+TGHKWFMSAPMCDAFLVLAQ GL+CFFMPRF Sbjct: 189 GMTEKQGGTDVRANITRAVRDGDAYRITGHKWFMSAPMCDAFLVLAQAEGGLTCFFMPRF 248 Query: 262 APDGTVNAIHFQRLKDKLGNRSNASSEVEFHGAHAELIGEEGKGIRTIIQMVQLTRQDCA 321 APDG+VN IHFQRLKDKLGNRSNASSEV F A+A +GEEG+G+ TIIQMV LTRQDC+ Sbjct: 249 APDGSVNGIHFQRLKDKLGNRSNASSEVVFDNAYALRLGEEGRGVPTIIQMVSLTRQDCS 308 Query: 322 IASAGLMRSGLAHALNHARHRSVFQKHLADQPLMQAVLSDMALHVEASIALVMRLCRAFD 381 +ASAGLMRSGLAHAL+HARHRSVFQKHLADQPLM++VL+DMALHVEAS ALVMRLCR+FD Sbjct: 309 LASAGLMRSGLAHALHHARHRSVFQKHLADQPLMRSVLADMALHVEASTALVMRLCRSFD 368 Query: 382 RAPAD 386 RA D Sbjct: 369 RATLD 373 >ref|YP_001206459.1| isovaleryl CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL78239.1| isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation damage) [Bradyrhizobium sp. ORS 278] Length = 547 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 296/373 (79%), Positives = 324/373 (86%) Query: 15 MTQAPFATHDVFNQSPPFENVDLFTVDAPLAAAVAANGGAAATAELSDFGKHWGSAAMAE 74 MTQ TH+VFNQSPPF +V+LFT D PL AVAANGG+ A EL FGK WGSA MAE Sbjct: 1 MTQPSLETHEVFNQSPPFADVNLFTADRPLMDAVAANGGSGAEQELIAFGKLWGSAEMAE 60 Query: 75 RGRVANENTPKLRLFDARGNRRDEVEFHPAYHELMAHSAHAGVHNSTWSADGKPAGGAAE 134 +GR+ANENTPKLR FDA+G RRD VEFHPAYH +MA + AG+HNSTW+A GKP GG+AE Sbjct: 61 QGRLANENTPKLRSFDAKGFRRDAVEFHPAYHHMMAQAVAAGLHNSTWTAQGKPVGGSAE 120 Query: 135 VVRAAKFYIASQVETGHLCPITMTRASVAALASQPDILAKTMPVIGTRAYDPTFAPWWTK 194 VVRAAKFY+ASQVE+GHLCPITMTRASVAALA QPD+LA+TM VI TR YDP FAPWW K Sbjct: 121 VVRAAKFYVASQVESGHLCPITMTRASVAALAPQPDLLAQTMRVIATRDYDPAFAPWWQK 180 Query: 195 RGMTLGMGMTEKQGGTDVRANMTRAERDGGAWRVTGHKWFMSAPMCDAFLVLAQTMDGLS 254 RGMTLGMGMTEKQGGTDVRANMT A R +R+TGHKWFMSAPMCDAFLVLAQ GL+ Sbjct: 181 RGMTLGMGMTEKQGGTDVRANMTSATRSTDGYRITGHKWFMSAPMCDAFLVLAQAEGGLT 240 Query: 255 CFFMPRFAPDGTVNAIHFQRLKDKLGNRSNASSEVEFHGAHAELIGEEGKGIRTIIQMVQ 314 CFFMPRF PDG VNA+ FQRLKDKLGNRSNASSEVEF GA+AE +GEEG+GI TIIQMVQ Sbjct: 241 CFFMPRFTPDGAVNALRFQRLKDKLGNRSNASSEVEFAGAYAERVGEEGRGISTIIQMVQ 300 Query: 315 LTRQDCAIASAGLMRSGLAHALNHARHRSVFQKHLADQPLMQAVLSDMALHVEASIALVM 374 LTRQDCAI+SAGLMRSGLAHAL+HARHRSVFQKHLADQPLMQAVL+DMALHVEA++ALVM Sbjct: 301 LTRQDCAISSAGLMRSGLAHALHHARHRSVFQKHLADQPLMQAVLADMALHVEATVALVM 360 Query: 375 RLCRAFDRAPADA 387 RLCRAFDR DA Sbjct: 361 RLCRAFDRMTDDA 373