BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0030.p (412 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pdb|1OBL|A Chain A, Crystal Structure Of The S133a Mutant Of Mal... 529 e-148 pdb|1O9O|A Chain A, Crystal Structure Of The S131a Mutant Of Mal... 529 e-148 ref|NP_771743.1| malonamidase E2 [Bradyrhizobium japonicum USDA ... 525 e-147 pdb|1OCK|A Chain A, The Crystal Structure Of Malonamidase E2 Fro... 525 e-147 pdb|1OBJ|A Chain A, Crystal Structure Of The T150a Mutant Of Mal... 523 e-146 >pdb|1OBL|A Chain A, Crystal Structure Of The S133a Mutant Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum pdb|1OBL|B Chain B, Crystal Structure Of The S133a Mutant Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum Length = 414 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 282/415 (67%), Positives = 335/415 (80%), Gaps = 6/415 (1%) Query: 1 MISLADLQRRIASGELSTDAAIAQTRDAIAAQDKAIGAFVRLDETARAQQAGPLRGIAVG 60 MISLADLQRRI +GELS +AAIAQ+ AI A++K + AFVR D++ARAQ +GPLRGIAVG Sbjct: 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVG 60 Query: 61 IKDIIDTADLPTEMGAAIYRGHQPRADAPVVMALKQAGATIIGKTTTTAFAANDPTATLN 120 IKDIIDTA++PTEMG+ IYRG QPR+DAPVVM LK+AGATIIGKTTTTAFA+ DPTATLN Sbjct: 61 IKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLN 120 Query: 121 PHNHAHTPGGSSSGSAAAVAAGMIPLALGTQTGGSVIRPASFCGVAAIKPSYRLLPTVGV 180 PHN H+PGGSS+GSAAAV AGMIPLALGTQTGGSVIRPA++CG AAIKPS+R+LPTVGV Sbjct: 121 PHNTGHSPGGSSAGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGV 180 Query: 181 KCFSWTLDTVGLFGAGVRDVALGLAAMTRRPEL--VVPSKVSAPRIGVATQAFAGSPEPS 238 KC+SW LDTVGLFGA D+A GL AMT R E +VP+K APRIGV Q FAG+ EP+ Sbjct: 181 KCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAK--APRIGVVRQEFAGAVEPA 238 Query: 239 GAEALQKAARAAEQAGATVRELAMPEIVAEAWRIHPVVQEFEAHQSFAWEYGQNYDAMPP 298 + LQ A +AAE+AGA+V+ + +PE V EAWRIHP++Q+FEAH++ AWE+ +++D + P Sbjct: 239 AEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAP 298 Query: 299 LLRGRLDESKGGTPAEYDAAMDVTLRARQALAAVLTEVDVLVTLSAPGAAP-KGLASTGD 357 +LR LD + G TP EYD A + R R+ L V VDVL+T SAPG AP K LASTGD Sbjct: 299 MLRASLDATVGLTPKEYDEARRIGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGD 358 Query: 358 PRYNRLWTLMGVPCVNVPTLTAEGGLPVGVTVIAGFGDDAKALAAASFVEDALKR 412 PRYNRLWTLMG PCVNVP L GGLP+GV VIA FG+DA ALA A F+EDAL + Sbjct: 359 PRYNRLWTLMGNPCVNVPVLKV-GGLPIGVQVIARFGNDAHALATAWFLEDALAK 412 >pdb|1O9O|A Chain A, Crystal Structure Of The S131a Mutant Of Malonamidase E2 Complexed With Malonamate From Bradyrhizobium Japonicum pdb|1O9O|B Chain B, Crystal Structure Of The S131a Mutant Of Malonamidase E2 Complexed With Malonamate From Bradyrhizobium Japonicum pdb|1O9P|A Chain A, Crystal Structure Of The S131a Mutant Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum pdb|1O9P|B Chain B, Crystal Structure Of The S131a Mutant Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum Length = 414 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 282/415 (67%), Positives = 335/415 (80%), Gaps = 6/415 (1%) Query: 1 MISLADLQRRIASGELSTDAAIAQTRDAIAAQDKAIGAFVRLDETARAQQAGPLRGIAVG 60 MISLADLQRRI +GELS +AAIAQ+ AI A++K + AFVR D++ARAQ +GPLRGIAVG Sbjct: 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVG 60 Query: 61 IKDIIDTADLPTEMGAAIYRGHQPRADAPVVMALKQAGATIIGKTTTTAFAANDPTATLN 120 IKDIIDTA++PTEMG+ IYRG QPR+DAPVVM LK+AGATIIGKTTTTAFA+ DPTATLN Sbjct: 61 IKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLN 120 Query: 121 PHNHAHTPGGSSSGSAAAVAAGMIPLALGTQTGGSVIRPASFCGVAAIKPSYRLLPTVGV 180 PHN H+PGG+SSGSAAAV AGMIPLALGTQTGGSVIRPA++CG AAIKPS+R+LPTVGV Sbjct: 121 PHNTGHSPGGASSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGV 180 Query: 181 KCFSWTLDTVGLFGAGVRDVALGLAAMTRRPEL--VVPSKVSAPRIGVATQAFAGSPEPS 238 KC+SW LDTVGLFGA D+A GL AMT R E +VP+K APRIGV Q FAG+ EP+ Sbjct: 181 KCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAK--APRIGVVRQEFAGAVEPA 238 Query: 239 GAEALQKAARAAEQAGATVRELAMPEIVAEAWRIHPVVQEFEAHQSFAWEYGQNYDAMPP 298 + LQ A +AAE+AGA+V+ + +PE V EAWRIHP++Q+FEAH++ AWE+ +++D + P Sbjct: 239 AEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAP 298 Query: 299 LLRGRLDESKGGTPAEYDAAMDVTLRARQALAAVLTEVDVLVTLSAPGAAP-KGLASTGD 357 +LR LD + G TP EYD A + R R+ L V VDVL+T SAPG AP K LASTGD Sbjct: 299 MLRASLDATVGLTPKEYDEARRIGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGD 358 Query: 358 PRYNRLWTLMGVPCVNVPTLTAEGGLPVGVTVIAGFGDDAKALAAASFVEDALKR 412 PRYNRLWTLMG PCVNVP L GGLP+GV VIA FG+DA ALA A F+EDAL + Sbjct: 359 PRYNRLWTLMGNPCVNVPVLKV-GGLPIGVQVIARFGNDAHALATAWFLEDALAK 412 >ref|NP_771743.1| malonamidase E2 [Bradyrhizobium japonicum USDA 110] gb|AAD01507.2| malonamidase E2 [Bradyrhizobium japonicum] dbj|BAC50368.1| malonamidase E2 [Bradyrhizobium japonicum USDA 110] Length = 414 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/415 (68%), Positives = 335/415 (80%), Gaps = 6/415 (1%) Query: 1 MISLADLQRRIASGELSTDAAIAQTRDAIAAQDKAIGAFVRLDETARAQQAGPLRGIAVG 60 MISLADLQRRI +GELS +AAIAQ+ AI A++K + AFVR D++ARAQ +GPLRGIAVG Sbjct: 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVG 60 Query: 61 IKDIIDTADLPTEMGAAIYRGHQPRADAPVVMALKQAGATIIGKTTTTAFAANDPTATLN 120 IKDIIDTA++PTEMG+ IYRG QPR+DAPVVM LK+AGATIIGKTTTTAFA+ DPTATLN Sbjct: 61 IKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLN 120 Query: 121 PHNHAHTPGGSSSGSAAAVAAGMIPLALGTQTGGSVIRPASFCGVAAIKPSYRLLPTVGV 180 PHN H+PGGSSSGSAAAV AGMIPLALGTQTGGSVIRPA++CG AAIKPS+R+LPTVGV Sbjct: 121 PHNTGHSPGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGV 180 Query: 181 KCFSWTLDTVGLFGAGVRDVALGLAAMTRRPEL--VVPSKVSAPRIGVATQAFAGSPEPS 238 KC+SW LDTVGLFGA D+A GL AMT R E +VP+K APRIGV Q FAG+ EP+ Sbjct: 181 KCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAK--APRIGVVRQEFAGAVEPA 238 Query: 239 GAEALQKAARAAEQAGATVRELAMPEIVAEAWRIHPVVQEFEAHQSFAWEYGQNYDAMPP 298 + LQ A +AAE+AGA+V+ + +PE V EAWRIHP++Q+FEAH++ AWE+ +++D + P Sbjct: 239 AEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAP 298 Query: 299 LLRGRLDESKGGTPAEYDAAMDVTLRARQALAAVLTEVDVLVTLSAPGAAP-KGLASTGD 357 +LR LD + G TP EYD A + R R+ L V VDVL+T SAPG AP K LASTGD Sbjct: 299 MLRASLDATVGLTPKEYDEARRIGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGD 358 Query: 358 PRYNRLWTLMGVPCVNVPTLTAEGGLPVGVTVIAGFGDDAKALAAASFVEDALKR 412 PRYNRLWTLMG PCVNVP L GGLP+GV VIA FG+DA ALA A F+EDAL + Sbjct: 359 PRYNRLWTLMGNPCVNVPVLKV-GGLPIGVQVIARFGNDAHALATAWFLEDALAK 412 >pdb|1OCK|A Chain A, The Crystal Structure Of Malonamidase E2 From Bradyrhizobium Japonicum pdb|1OCK|B Chain B, The Crystal Structure Of Malonamidase E2 From Bradyrhizobium Japonicum pdb|1OCL|A Chain A, The Crystal Structure Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum pdb|1OCL|B Chain B, The Crystal Structure Of Malonamidase E2 Complexed With Malonate From Bradyrhizobium Japonicum pdb|1OCM|A Chain A, The Crystal Structure Of Malonamidase E2 Covalently Complexed With Pyrophosphate From Bradyrhizobium Japonicum pdb|1OCM|B Chain B, The Crystal Structure Of Malonamidase E2 Covalently Complexed With Pyrophosphate From Bradyrhizobium Japonicum Length = 412 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 283/415 (68%), Positives = 335/415 (80%), Gaps = 6/415 (1%) Query: 1 MISLADLQRRIASGELSTDAAIAQTRDAIAAQDKAIGAFVRLDETARAQQAGPLRGIAVG 60 MISLADLQRRI +GELS +AAIAQ+ AI A++K + AFVR D++ARAQ +GPLRGIAVG Sbjct: 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVG 60 Query: 61 IKDIIDTADLPTEMGAAIYRGHQPRADAPVVMALKQAGATIIGKTTTTAFAANDPTATLN 120 IKDIIDTA++PTEMG+ IYRG QPR+DAPVVM LK+AGATIIGKTTTTAFA+ DPTATLN Sbjct: 61 IKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLN 120 Query: 121 PHNHAHTPGGSSSGSAAAVAAGMIPLALGTQTGGSVIRPASFCGVAAIKPSYRLLPTVGV 180 PHN H+PGGSSSGSAAAV AGMIPLALGTQTGGSVIRPA++CG AAIKPS+R+LPTVGV Sbjct: 121 PHNTGHSPGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGV 180 Query: 181 KCFSWTLDTVGLFGAGVRDVALGLAAMTRRPEL--VVPSKVSAPRIGVATQAFAGSPEPS 238 KC+SW LDTVGLFGA D+A GL AMT R E +VP+K APRIGV Q FAG+ EP+ Sbjct: 181 KCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAK--APRIGVVRQEFAGAVEPA 238 Query: 239 GAEALQKAARAAEQAGATVRELAMPEIVAEAWRIHPVVQEFEAHQSFAWEYGQNYDAMPP 298 + LQ A +AAE+AGA+V+ + +PE V EAWRIHP++Q+FEAH++ AWE+ +++D + P Sbjct: 239 AEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAP 298 Query: 299 LLRGRLDESKGGTPAEYDAAMDVTLRARQALAAVLTEVDVLVTLSAPGAAP-KGLASTGD 357 +LR LD + G TP EYD A + R R+ L V VDVL+T SAPG AP K LASTGD Sbjct: 299 MLRASLDATVGLTPKEYDEARRIGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGD 358 Query: 358 PRYNRLWTLMGVPCVNVPTLTAEGGLPVGVTVIAGFGDDAKALAAASFVEDALKR 412 PRYNRLWTLMG PCVNVP L GGLP+GV VIA FG+DA ALA A F+EDAL + Sbjct: 359 PRYNRLWTLMGNPCVNVPVLKV-GGLPIGVQVIARFGNDAHALATAWFLEDALAK 412 >pdb|1OBJ|A Chain A, Crystal Structure Of The T150a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum pdb|1OBJ|B Chain B, Crystal Structure Of The T150a Mutant Of Malonamidase E2 From Bradyrhizobium Japonicum Length = 414 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 282/415 (67%), Positives = 334/415 (80%), Gaps = 6/415 (1%) Query: 1 MISLADLQRRIASGELSTDAAIAQTRDAIAAQDKAIGAFVRLDETARAQQAGPLRGIAVG 60 MISLADLQRRI +GELS +AAIAQ+ AI A++K + AFVR D++ARAQ +GPLRGIAVG Sbjct: 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVG 60 Query: 61 IKDIIDTADLPTEMGAAIYRGHQPRADAPVVMALKQAGATIIGKTTTTAFAANDPTATLN 120 IKDIIDTA++PTEMG+ IYRG QPR+DAPVVM LK+AGATIIGKTTTTAFA+ DPTATLN Sbjct: 61 IKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLN 120 Query: 121 PHNHAHTPGGSSSGSAAAVAAGMIPLALGTQTGGSVIRPASFCGVAAIKPSYRLLPTVGV 180 PHN H+PGGSSSGSAAAV AGMIPLALG QTGGSVIRPA++CG AAIKPS+R+LPTVGV Sbjct: 121 PHNTGHSPGGSSSGSAAAVGAGMIPLALGAQTGGSVIRPAAYCGTAAIKPSFRMLPTVGV 180 Query: 181 KCFSWTLDTVGLFGAGVRDVALGLAAMTRRPEL--VVPSKVSAPRIGVATQAFAGSPEPS 238 KC+SW LDTVGLFGA D+A GL AMT R E +VP+K APRIGV Q FAG+ EP+ Sbjct: 181 KCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAK--APRIGVVRQEFAGAVEPA 238 Query: 239 GAEALQKAARAAEQAGATVRELAMPEIVAEAWRIHPVVQEFEAHQSFAWEYGQNYDAMPP 298 + LQ A +AAE+AGA+V+ + +PE V EAWRIHP++Q+FEAH++ AWE+ +++D + P Sbjct: 239 AEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAP 298 Query: 299 LLRGRLDESKGGTPAEYDAAMDVTLRARQALAAVLTEVDVLVTLSAPGAAP-KGLASTGD 357 +LR LD + G TP EYD A + R R+ L V VDVL+T SAPG AP K LASTGD Sbjct: 299 MLRASLDATVGLTPKEYDEARRIGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGD 358 Query: 358 PRYNRLWTLMGVPCVNVPTLTAEGGLPVGVTVIAGFGDDAKALAAASFVEDALKR 412 PRYNRLWTLMG PCVNVP L GGLP+GV VIA FG+DA ALA A F+EDAL + Sbjct: 359 PRYNRLWTLMGNPCVNVPVLKV-GGLPIGVQVIARFGNDAHALATAWFLEDALAK 412